Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07615 and CA264_07620 are separated by 162 nucleotides CA264_07620 and CA264_07625 are separated by 101 nucleotides CA264_07625 and CA264_07630 are separated by 165 nucleotides
CA264_07615: CA264_07615 - Two-component hybrid sensor and regulator, at 1,763,952 to 1,768,475
_07615
CA264_07620: CA264_07620 - hypothetical protein, at 1,768,638 to 1,769,384
_07620
CA264_07625: CA264_07625 - phosphohistidine phosphatase, at 1,769,486 to 1,769,983
_07625
CA264_07630: CA264_07630 - DNA topoisomerase I, at 1,770,149 to 1,772,596
_07630
Position (kb)
1768
1769
1770 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1767.837 kb on + strand, within CA264_07615 at 1767.838 kb on - strand, within CA264_07615 at 1767.916 kb on - strand, within CA264_07615 at 1768.068 kb on + strand at 1768.097 kb on + strand at 1768.097 kb on + strand at 1768.098 kb on - strand at 1768.099 kb on + strand at 1768.099 kb on + strand at 1768.099 kb on + strand at 1768.099 kb on + strand at 1768.187 kb on - strand at 1768.187 kb on - strand at 1768.187 kb on - strand at 1768.258 kb on - strand at 1768.337 kb on + strand at 1768.364 kb on + strand at 1768.422 kb on + strand at 1768.422 kb on + strand at 1768.422 kb on + strand at 1768.422 kb on + strand at 1768.467 kb on + strand at 1768.560 kb on - strand at 1768.560 kb on - strand at 1768.595 kb on - strand at 1768.603 kb on - strand at 1768.625 kb on + strand at 1768.626 kb on - strand at 1768.702 kb on + strand at 1768.703 kb on - strand at 1768.746 kb on + strand, within CA264_07620 at 1768.747 kb on - strand, within CA264_07620 at 1768.747 kb on - strand, within CA264_07620 at 1768.821 kb on + strand, within CA264_07620 at 1768.851 kb on + strand, within CA264_07620 at 1769.026 kb on - strand, within CA264_07620 at 1769.063 kb on + strand, within CA264_07620 at 1769.225 kb on + strand, within CA264_07620 at 1769.319 kb on + strand at 1769.328 kb on - strand at 1769.371 kb on - strand at 1769.371 kb on - strand at 1769.385 kb on - strand at 1769.385 kb on - strand at 1769.419 kb on + strand at 1769.447 kb on + strand at 1769.453 kb on - strand at 1769.468 kb on + strand at 1769.514 kb on - strand at 1769.618 kb on + strand, within CA264_07625 at 1769.619 kb on - strand, within CA264_07625 at 1769.752 kb on + strand, within CA264_07625 at 1769.769 kb on + strand, within CA264_07625 at 1769.927 kb on + strand, within CA264_07625 at 1769.969 kb on + strand at 1769.984 kb on - strand at 1770.005 kb on - strand at 1770.012 kb on - strand at 1770.012 kb on - strand at 1770.015 kb on - strand at 1770.028 kb on - strand at 1770.061 kb on + strand at 1770.062 kb on - strand at 1770.067 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,767,837 + CA264_07615 0.86 +0.7 1,767,838 - CA264_07615 0.86 +0.4 1,767,916 - CA264_07615 0.88 +0.5 1,768,068 + +1.0 1,768,097 + +0.9 1,768,097 + -0.6 1,768,098 - +0.4 1,768,099 + +1.3 1,768,099 + -0.9 1,768,099 + -1.7 1,768,099 + -0.1 1,768,187 - -0.8 1,768,187 - -0.2 1,768,187 - +0.3 1,768,258 - +0.5 1,768,337 + +0.2 1,768,364 + +0.5 1,768,422 + -1.2 1,768,422 + +0.5 1,768,422 + +0.0 1,768,422 + -1.7 1,768,467 + +0.1 1,768,560 - +0.3 1,768,560 - +0.6 1,768,595 - +0.2 1,768,603 - +0.6 1,768,625 + -0.0 1,768,626 - -0.1 1,768,702 + -0.8 1,768,703 - +0.1 1,768,746 + CA264_07620 0.14 +0.5 1,768,747 - CA264_07620 0.15 +1.2 1,768,747 - CA264_07620 0.15 +0.6 1,768,821 + CA264_07620 0.24 -0.0 1,768,851 + CA264_07620 0.29 +0.7 1,769,026 - CA264_07620 0.52 +0.3 1,769,063 + CA264_07620 0.57 +0.7 1,769,225 + CA264_07620 0.79 +3.4 1,769,319 + +1.0 1,769,328 - -0.4 1,769,371 - -0.3 1,769,371 - -0.7 1,769,385 - +0.4 1,769,385 - -1.6 1,769,419 + +0.2 1,769,447 + -0.1 1,769,453 - +0.5 1,769,468 + +1.1 1,769,514 - +1.7 1,769,618 + CA264_07625 0.27 +1.1 1,769,619 - CA264_07625 0.27 +0.4 1,769,752 + CA264_07625 0.53 +1.2 1,769,769 + CA264_07625 0.57 -0.4 1,769,927 + CA264_07625 0.89 +0.1 1,769,969 + +0.6 1,769,984 - +2.0 1,770,005 - +0.4 1,770,012 - +0.2 1,770,012 - +0.6 1,770,015 - +0.2 1,770,028 - +0.0 1,770,061 + +0.4 1,770,062 - +0.7 1,770,067 - +0.7
Or see this region's nucleotide sequence