Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07320 and CA264_07325 are separated by 73 nucleotides CA264_07325 and CA264_07330 are separated by 77 nucleotides CA264_07330 and CA264_07335 are separated by 32 nucleotides CA264_07335 and CA264_07340 are separated by 357 nucleotides
CA264_07320: CA264_07320 - arsenical-resistance protein, at 1,691,477 to 1,692,559
_07320
CA264_07325: CA264_07325 - YfcE family phosphodiesterase, at 1,692,633 to 1,693,409
_07325
CA264_07330: CA264_07330 - hypothetical protein, at 1,693,487 to 1,694,017
_07330
CA264_07335: CA264_07335 - transcriptional regulator, at 1,694,050 to 1,694,391
_07335
CA264_07340: CA264_07340 - hypothetical protein, at 1,694,749 to 1,695,312
_07340
Position (kb)
1693
1694
1695 Strain fitness (log2 ratio)
-2
-1
0
1 at 1692.505 kb on - strand at 1692.537 kb on + strand at 1692.538 kb on - strand at 1692.542 kb on - strand at 1692.567 kb on + strand at 1692.637 kb on + strand at 1692.637 kb on + strand at 1692.638 kb on - strand at 1692.716 kb on - strand, within CA264_07325 at 1692.726 kb on + strand, within CA264_07325 at 1692.728 kb on + strand, within CA264_07325 at 1692.729 kb on - strand, within CA264_07325 at 1692.741 kb on + strand, within CA264_07325 at 1692.794 kb on - strand, within CA264_07325 at 1692.818 kb on + strand, within CA264_07325 at 1692.818 kb on + strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.856 kb on + strand, within CA264_07325 at 1692.991 kb on + strand, within CA264_07325 at 1693.222 kb on + strand, within CA264_07325 at 1693.223 kb on - strand, within CA264_07325 at 1693.226 kb on + strand, within CA264_07325 at 1693.292 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.371 kb on + strand at 1693.427 kb on - strand at 1693.549 kb on + strand, within CA264_07330 at 1693.549 kb on + strand, within CA264_07330 at 1693.550 kb on - strand, within CA264_07330 at 1693.550 kb on - strand, within CA264_07330 at 1693.589 kb on - strand, within CA264_07330 at 1693.653 kb on + strand, within CA264_07330 at 1693.653 kb on + strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.654 kb on - strand, within CA264_07330 at 1693.657 kb on - strand, within CA264_07330 at 1693.657 kb on - strand, within CA264_07330 at 1693.658 kb on + strand, within CA264_07330 at 1693.658 kb on + strand, within CA264_07330 at 1693.658 kb on + strand, within CA264_07330 at 1693.659 kb on - strand, within CA264_07330 at 1693.659 kb on - strand, within CA264_07330 at 1693.730 kb on + strand, within CA264_07330 at 1693.731 kb on - strand, within CA264_07330 at 1693.731 kb on - strand, within CA264_07330 at 1693.802 kb on + strand, within CA264_07330 at 1693.862 kb on + strand, within CA264_07330 at 1693.863 kb on - strand, within CA264_07330 at 1693.891 kb on - strand, within CA264_07330 at 1694.046 kb on - strand at 1694.111 kb on - strand, within CA264_07335 at 1694.150 kb on + strand, within CA264_07335 at 1694.151 kb on - strand, within CA264_07335 at 1694.151 kb on - strand, within CA264_07335 at 1694.170 kb on + strand, within CA264_07335 at 1694.199 kb on + strand, within CA264_07335 at 1694.200 kb on - strand, within CA264_07335 at 1694.200 kb on - strand, within CA264_07335 at 1694.382 kb on + strand at 1694.383 kb on - strand at 1694.416 kb on - strand at 1694.428 kb on + strand at 1694.431 kb on + strand at 1694.435 kb on + strand at 1694.438 kb on - strand at 1694.441 kb on + strand at 1694.442 kb on - strand at 1694.530 kb on + strand at 1694.601 kb on + strand at 1694.602 kb on - strand at 1694.602 kb on - strand at 1694.606 kb on + strand at 1694.606 kb on + strand at 1694.643 kb on - strand at 1694.725 kb on + strand at 1694.725 kb on + strand at 1694.751 kb on - strand at 1694.793 kb on - strand at 1694.907 kb on - strand, within CA264_07340 at 1694.948 kb on - strand, within CA264_07340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,692,505 - +0.1 1,692,537 + -0.2 1,692,538 - +0.1 1,692,542 - -0.4 1,692,567 + -0.7 1,692,637 + +0.3 1,692,637 + +0.5 1,692,638 - -0.9 1,692,716 - CA264_07325 0.11 -0.9 1,692,726 + CA264_07325 0.12 -0.7 1,692,728 + CA264_07325 0.12 +0.7 1,692,729 - CA264_07325 0.12 -0.4 1,692,741 + CA264_07325 0.14 -0.0 1,692,794 - CA264_07325 0.21 +0.1 1,692,818 + CA264_07325 0.24 -0.7 1,692,818 + CA264_07325 0.24 -0.3 1,692,855 - CA264_07325 0.29 -0.3 1,692,855 - CA264_07325 0.29 -0.7 1,692,855 - CA264_07325 0.29 -0.9 1,692,856 + CA264_07325 0.29 -0.5 1,692,991 + CA264_07325 0.46 -0.5 1,693,222 + CA264_07325 0.76 -0.4 1,693,223 - CA264_07325 0.76 +0.4 1,693,226 + CA264_07325 0.76 -0.1 1,693,292 - CA264_07325 0.85 -1.4 1,693,316 - CA264_07325 0.88 -1.4 1,693,316 - CA264_07325 0.88 +0.1 1,693,316 - CA264_07325 0.88 +0.1 1,693,371 + +0.7 1,693,427 - +0.7 1,693,549 + CA264_07330 0.12 -0.4 1,693,549 + CA264_07330 0.12 +0.6 1,693,550 - CA264_07330 0.12 -0.2 1,693,550 - CA264_07330 0.12 -0.3 1,693,589 - CA264_07330 0.19 -0.5 1,693,653 + CA264_07330 0.31 +1.3 1,693,653 + CA264_07330 0.31 +0.4 1,693,654 - CA264_07330 0.31 -0.6 1,693,654 - CA264_07330 0.31 +0.4 1,693,654 - CA264_07330 0.31 +0.8 1,693,654 - CA264_07330 0.31 +0.2 1,693,657 - CA264_07330 0.32 -0.7 1,693,657 - CA264_07330 0.32 -0.1 1,693,658 + CA264_07330 0.32 +0.3 1,693,658 + CA264_07330 0.32 +0.1 1,693,658 + CA264_07330 0.32 +0.4 1,693,659 - CA264_07330 0.32 +1.1 1,693,659 - CA264_07330 0.32 -1.8 1,693,730 + CA264_07330 0.46 +0.3 1,693,731 - CA264_07330 0.46 +0.7 1,693,731 - CA264_07330 0.46 -0.0 1,693,802 + CA264_07330 0.59 +1.1 1,693,862 + CA264_07330 0.71 -1.7 1,693,863 - CA264_07330 0.71 -0.1 1,693,891 - CA264_07330 0.76 -0.3 1,694,046 - -0.6 1,694,111 - CA264_07335 0.18 -1.4 1,694,150 + CA264_07335 0.29 -0.9 1,694,151 - CA264_07335 0.30 -0.1 1,694,151 - CA264_07335 0.30 -0.2 1,694,170 + CA264_07335 0.35 -0.4 1,694,199 + CA264_07335 0.44 -0.9 1,694,200 - CA264_07335 0.44 -0.2 1,694,200 - CA264_07335 0.44 -1.1 1,694,382 + -0.8 1,694,383 - -0.0 1,694,416 - -0.9 1,694,428 + -0.7 1,694,431 + +1.1 1,694,435 + -0.1 1,694,438 - -1.1 1,694,441 + +0.6 1,694,442 - -0.7 1,694,530 + -1.3 1,694,601 + -0.4 1,694,602 - -0.2 1,694,602 - -0.2 1,694,606 + -0.1 1,694,606 + +0.7 1,694,643 - -2.4 1,694,725 + +0.6 1,694,725 + +0.4 1,694,751 - -0.7 1,694,793 - -0.2 1,694,907 - CA264_07340 0.28 +0.2 1,694,948 - CA264_07340 0.35 +0.1
Or see this region's nucleotide sequence