Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07305 and CA264_07310 are separated by 80 nucleotides CA264_07310 and CA264_07315 overlap by 4 nucleotides CA264_07315 and CA264_07320 are separated by 134 nucleotides
CA264_07305: CA264_07305 - hypothetical protein, at 1,688,060 to 1,689,325
_07305
CA264_07310: CA264_07310 - two-component sensor histidine kinase, at 1,689,406 to 1,690,668
_07310
CA264_07315: CA264_07315 - DNA-binding response regulator, at 1,690,665 to 1,691,342
_07315
CA264_07320: CA264_07320 - arsenical-resistance protein, at 1,691,477 to 1,692,559
_07320
Position (kb)
1689
1690
1691 Strain fitness (log2 ratio)
-2
-1
0
1 at 1688.448 kb on + strand, within CA264_07305 at 1688.449 kb on - strand, within CA264_07305 at 1688.449 kb on - strand, within CA264_07305 at 1688.490 kb on + strand, within CA264_07305 at 1688.491 kb on - strand, within CA264_07305 at 1688.611 kb on + strand, within CA264_07305 at 1688.628 kb on - strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.904 kb on - strand, within CA264_07305 at 1688.904 kb on - strand, within CA264_07305 at 1688.967 kb on + strand, within CA264_07305 at 1688.968 kb on - strand, within CA264_07305 at 1689.014 kb on - strand, within CA264_07305 at 1689.074 kb on + strand, within CA264_07305 at 1689.159 kb on + strand, within CA264_07305 at 1689.159 kb on + strand, within CA264_07305 at 1689.160 kb on - strand, within CA264_07305 at 1689.204 kb on + strand at 1689.227 kb on + strand at 1689.278 kb on - strand at 1689.302 kb on + strand at 1689.309 kb on - strand at 1689.314 kb on + strand at 1689.332 kb on + strand at 1689.359 kb on + strand at 1689.365 kb on + strand at 1689.365 kb on + strand at 1689.366 kb on - strand at 1689.366 kb on - strand at 1689.366 kb on - strand at 1689.368 kb on - strand at 1689.368 kb on - strand at 1689.416 kb on + strand at 1689.416 kb on + strand at 1689.416 kb on + strand at 1689.417 kb on - strand at 1689.420 kb on + strand at 1689.446 kb on + strand at 1689.453 kb on - strand at 1689.464 kb on - strand at 1689.628 kb on + strand, within CA264_07310 at 1689.628 kb on + strand, within CA264_07310 at 1689.628 kb on + strand, within CA264_07310 at 1689.895 kb on + strand, within CA264_07310 at 1689.905 kb on + strand, within CA264_07310 at 1689.905 kb on + strand, within CA264_07310 at 1689.905 kb on + strand, within CA264_07310 at 1689.906 kb on - strand, within CA264_07310 at 1689.906 kb on - strand, within CA264_07310 at 1689.906 kb on - strand, within CA264_07310 at 1689.958 kb on - strand, within CA264_07310 at 1689.980 kb on - strand, within CA264_07310 at 1690.107 kb on + strand, within CA264_07310 at 1690.113 kb on + strand, within CA264_07310 at 1690.113 kb on + strand, within CA264_07310 at 1690.114 kb on - strand, within CA264_07310 at 1690.151 kb on + strand, within CA264_07310 at 1690.178 kb on + strand, within CA264_07310 at 1690.197 kb on - strand, within CA264_07310 at 1690.197 kb on - strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.212 kb on - strand, within CA264_07310 at 1690.212 kb on - strand, within CA264_07310 at 1690.310 kb on - strand, within CA264_07310 at 1690.319 kb on + strand, within CA264_07310 at 1690.397 kb on + strand, within CA264_07310 at 1690.398 kb on - strand, within CA264_07310 at 1690.459 kb on + strand, within CA264_07310 at 1690.590 kb on - strand at 1690.590 kb on - strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.640 kb on + strand at 1690.640 kb on + strand at 1690.640 kb on + strand at 1690.682 kb on + strand at 1690.696 kb on + strand at 1690.711 kb on + strand at 1690.711 kb on + strand at 1690.755 kb on - strand, within CA264_07315 at 1690.836 kb on - strand, within CA264_07315 at 1690.839 kb on + strand, within CA264_07315 at 1690.864 kb on + strand, within CA264_07315 at 1690.865 kb on - strand, within CA264_07315 at 1690.957 kb on - strand, within CA264_07315 at 1691.134 kb on + strand, within CA264_07315 at 1691.134 kb on + strand, within CA264_07315 at 1691.187 kb on + strand, within CA264_07315 at 1691.188 kb on - strand, within CA264_07315 at 1691.287 kb on + strand at 1691.328 kb on + strand at 1691.342 kb on + strand at 1691.373 kb on + strand at 1691.503 kb on + strand at 1691.503 kb on + strand at 1691.509 kb on + strand at 1691.509 kb on + strand at 1691.510 kb on - strand at 1691.656 kb on + strand, within CA264_07320
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,688,448 + CA264_07305 0.31 +0.2 1,688,449 - CA264_07305 0.31 +0.6 1,688,449 - CA264_07305 0.31 -0.3 1,688,490 + CA264_07305 0.34 +1.3 1,688,491 - CA264_07305 0.34 +0.3 1,688,611 + CA264_07305 0.44 +0.1 1,688,628 - CA264_07305 0.45 -0.1 1,688,694 + CA264_07305 0.50 +0.1 1,688,694 + CA264_07305 0.50 -1.2 1,688,694 + CA264_07305 0.50 +0.1 1,688,904 - CA264_07305 0.67 -0.2 1,688,904 - CA264_07305 0.67 +0.6 1,688,967 + CA264_07305 0.72 -0.2 1,688,968 - CA264_07305 0.72 -0.1 1,689,014 - CA264_07305 0.75 -0.4 1,689,074 + CA264_07305 0.80 +0.1 1,689,159 + CA264_07305 0.87 -0.1 1,689,159 + CA264_07305 0.87 +1.0 1,689,160 - CA264_07305 0.87 -1.7 1,689,204 + -1.2 1,689,227 + -0.5 1,689,278 - +0.0 1,689,302 + -0.0 1,689,309 - -1.0 1,689,314 + +0.0 1,689,332 + +0.1 1,689,359 + -0.8 1,689,365 + +0.1 1,689,365 + -0.0 1,689,366 - -0.2 1,689,366 - -0.1 1,689,366 - -0.2 1,689,368 - +0.1 1,689,368 - -0.2 1,689,416 + -0.7 1,689,416 + -0.3 1,689,416 + -1.2 1,689,417 - -0.0 1,689,420 + +0.2 1,689,446 + +0.4 1,689,453 - -0.3 1,689,464 - +0.6 1,689,628 + CA264_07310 0.18 -0.6 1,689,628 + CA264_07310 0.18 -0.4 1,689,628 + CA264_07310 0.18 +1.0 1,689,895 + CA264_07310 0.39 +0.5 1,689,905 + CA264_07310 0.40 -0.4 1,689,905 + CA264_07310 0.40 -1.6 1,689,905 + CA264_07310 0.40 -0.3 1,689,906 - CA264_07310 0.40 -0.5 1,689,906 - CA264_07310 0.40 +0.1 1,689,906 - CA264_07310 0.40 -0.4 1,689,958 - CA264_07310 0.44 +0.0 1,689,980 - CA264_07310 0.45 -0.2 1,690,107 + CA264_07310 0.56 +0.1 1,690,113 + CA264_07310 0.56 +0.3 1,690,113 + CA264_07310 0.56 -0.0 1,690,114 - CA264_07310 0.56 -1.2 1,690,151 + CA264_07310 0.59 +0.2 1,690,178 + CA264_07310 0.61 -0.5 1,690,197 - CA264_07310 0.63 +0.4 1,690,197 - CA264_07310 0.63 +1.6 1,690,211 + CA264_07310 0.64 -0.8 1,690,211 + CA264_07310 0.64 +0.9 1,690,211 + CA264_07310 0.64 +0.8 1,690,211 + CA264_07310 0.64 -0.4 1,690,212 - CA264_07310 0.64 -1.2 1,690,212 - CA264_07310 0.64 -1.6 1,690,310 - CA264_07310 0.72 -0.7 1,690,319 + CA264_07310 0.72 -0.7 1,690,397 + CA264_07310 0.78 -0.5 1,690,398 - CA264_07310 0.79 -0.2 1,690,459 + CA264_07310 0.83 +0.1 1,690,590 - +0.7 1,690,590 - +0.4 1,690,637 + +0.3 1,690,637 + -1.0 1,690,637 + -0.4 1,690,637 + +0.3 1,690,637 + -0.0 1,690,640 + -1.0 1,690,640 + +1.6 1,690,640 + -0.2 1,690,682 + +1.0 1,690,696 + +0.6 1,690,711 + +0.8 1,690,711 + -0.1 1,690,755 - CA264_07315 0.13 +0.3 1,690,836 - CA264_07315 0.25 +0.7 1,690,839 + CA264_07315 0.26 +0.5 1,690,864 + CA264_07315 0.29 +0.6 1,690,865 - CA264_07315 0.29 -0.6 1,690,957 - CA264_07315 0.43 -2.3 1,691,134 + CA264_07315 0.69 +1.5 1,691,134 + CA264_07315 0.69 -0.2 1,691,187 + CA264_07315 0.77 -0.1 1,691,188 - CA264_07315 0.77 -0.4 1,691,287 + -0.4 1,691,328 + -0.8 1,691,342 + +0.3 1,691,373 + +0.1 1,691,503 + +0.4 1,691,503 + -0.5 1,691,509 + -1.2 1,691,509 + +0.5 1,691,510 - -0.5 1,691,656 + CA264_07320 0.17 -0.8
Or see this region's nucleotide sequence