Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06990 and CA264_06995 are separated by 1 nucleotides CA264_06995 and CA264_07000 are separated by 6 nucleotides CA264_07000 and CA264_07005 are separated by 14 nucleotides CA264_07005 and CA264_07010 are separated by 19 nucleotides
CA264_06990: CA264_06990 - PA-phosphatase, at 1,613,027 to 1,613,977
_06990
CA264_06995: CA264_06995 - fatty acid hydroxylase, at 1,613,979 to 1,614,599
_06995
CA264_07000: CA264_07000 - DUF4833 domain-containing protein, at 1,614,606 to 1,615,172
_07000
CA264_07005: CA264_07005 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase, at 1,615,187 to 1,615,906
_07005
CA264_07010: CA264_07010 - hypothetical protein, at 1,615,926 to 1,618,535
_07010
Position (kb)
1614
1615
1616 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1613.642 kb on + strand, within CA264_06990 at 1613.642 kb on + strand, within CA264_06990 at 1613.642 kb on + strand, within CA264_06990 at 1613.688 kb on + strand, within CA264_06990 at 1613.689 kb on - strand, within CA264_06990 at 1613.722 kb on - strand, within CA264_06990 at 1613.742 kb on + strand, within CA264_06990 at 1613.743 kb on - strand, within CA264_06990 at 1613.748 kb on + strand, within CA264_06990 at 1613.818 kb on - strand, within CA264_06990 at 1613.828 kb on + strand, within CA264_06990 at 1613.829 kb on - strand, within CA264_06990 at 1613.970 kb on - strand at 1614.030 kb on + strand at 1614.108 kb on - strand, within CA264_06995 at 1614.131 kb on - strand, within CA264_06995 at 1614.154 kb on + strand, within CA264_06995 at 1614.184 kb on + strand, within CA264_06995 at 1614.185 kb on - strand, within CA264_06995 at 1614.481 kb on - strand, within CA264_06995 at 1614.494 kb on - strand, within CA264_06995 at 1614.494 kb on - strand, within CA264_06995 at 1614.494 kb on - strand, within CA264_06995 at 1614.512 kb on + strand, within CA264_06995 at 1614.513 kb on - strand, within CA264_06995 at 1614.514 kb on + strand, within CA264_06995 at 1614.514 kb on + strand, within CA264_06995 at 1614.514 kb on + strand, within CA264_06995 at 1614.519 kb on + strand, within CA264_06995 at 1614.519 kb on + strand, within CA264_06995 at 1614.520 kb on - strand, within CA264_06995 at 1614.547 kb on + strand at 1614.547 kb on + strand at 1614.548 kb on - strand at 1614.551 kb on + strand at 1614.551 kb on + strand at 1614.551 kb on + strand at 1614.552 kb on - strand at 1614.614 kb on + strand at 1614.666 kb on + strand, within CA264_07000 at 1614.667 kb on - strand, within CA264_07000 at 1614.667 kb on - strand, within CA264_07000 at 1614.670 kb on + strand, within CA264_07000 at 1614.670 kb on + strand, within CA264_07000 at 1614.671 kb on - strand, within CA264_07000 at 1614.758 kb on - strand, within CA264_07000 at 1614.766 kb on + strand, within CA264_07000 at 1614.766 kb on + strand, within CA264_07000 at 1614.767 kb on - strand, within CA264_07000 at 1614.767 kb on - strand, within CA264_07000 at 1614.833 kb on - strand, within CA264_07000 at 1614.890 kb on - strand, within CA264_07000 at 1614.922 kb on + strand, within CA264_07000 at 1614.991 kb on + strand, within CA264_07000 at 1614.991 kb on + strand, within CA264_07000 at 1614.992 kb on - strand, within CA264_07000 at 1615.068 kb on - strand, within CA264_07000 at 1615.068 kb on - strand, within CA264_07000 at 1615.132 kb on + strand at 1615.132 kb on + strand at 1615.152 kb on + strand at 1615.182 kb on + strand at 1615.189 kb on - strand at 1615.338 kb on + strand, within CA264_07005 at 1615.340 kb on + strand, within CA264_07005 at 1615.340 kb on + strand, within CA264_07005 at 1615.341 kb on - strand, within CA264_07005 at 1615.346 kb on - strand, within CA264_07005 at 1615.348 kb on - strand, within CA264_07005 at 1615.348 kb on - strand, within CA264_07005 at 1615.368 kb on + strand, within CA264_07005 at 1615.442 kb on - strand, within CA264_07005 at 1615.480 kb on - strand, within CA264_07005 at 1615.484 kb on + strand, within CA264_07005 at 1615.484 kb on + strand, within CA264_07005 at 1615.484 kb on + strand, within CA264_07005 at 1615.484 kb on + strand, within CA264_07005 at 1615.484 kb on + strand, within CA264_07005 at 1615.485 kb on - strand, within CA264_07005 at 1615.571 kb on - strand, within CA264_07005 at 1615.611 kb on + strand, within CA264_07005 at 1615.611 kb on + strand, within CA264_07005 at 1615.612 kb on - strand, within CA264_07005 at 1615.612 kb on - strand, within CA264_07005 at 1615.716 kb on + strand, within CA264_07005 at 1615.756 kb on + strand, within CA264_07005 at 1615.762 kb on + strand, within CA264_07005 at 1615.798 kb on + strand, within CA264_07005 at 1615.799 kb on - strand, within CA264_07005 at 1615.817 kb on - strand, within CA264_07005 at 1615.863 kb on + strand at 1615.863 kb on + strand at 1615.863 kb on + strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.864 kb on - strand at 1615.865 kb on + strand at 1615.865 kb on + strand at 1615.865 kb on + strand at 1615.866 kb on - strand at 1615.867 kb on + strand at 1615.868 kb on - strand at 1615.868 kb on - strand at 1615.868 kb on - strand at 1615.907 kb on - strand at 1615.912 kb on - strand at 1615.912 kb on - strand at 1615.919 kb on - strand at 1615.953 kb on + strand at 1615.953 kb on + strand at 1615.954 kb on - strand at 1615.959 kb on + strand at 1615.959 kb on + strand at 1615.974 kb on - strand at 1616.010 kb on + strand at 1616.011 kb on - strand at 1616.057 kb on + strand at 1616.057 kb on + strand at 1616.057 kb on + strand at 1616.058 kb on - strand at 1616.059 kb on + strand at 1616.059 kb on + strand at 1616.060 kb on - strand at 1616.081 kb on - strand at 1616.081 kb on - strand at 1616.168 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,613,642 + CA264_06990 0.65 +0.4 1,613,642 + CA264_06990 0.65 -0.1 1,613,642 + CA264_06990 0.65 +1.1 1,613,688 + CA264_06990 0.70 +1.1 1,613,689 - CA264_06990 0.70 -1.0 1,613,722 - CA264_06990 0.73 -1.2 1,613,742 + CA264_06990 0.75 +0.4 1,613,743 - CA264_06990 0.75 -0.7 1,613,748 + CA264_06990 0.76 -0.8 1,613,818 - CA264_06990 0.83 -1.0 1,613,828 + CA264_06990 0.84 -1.0 1,613,829 - CA264_06990 0.84 +0.0 1,613,970 - -1.1 1,614,030 + +0.2 1,614,108 - CA264_06995 0.21 +0.5 1,614,131 - CA264_06995 0.24 +1.4 1,614,154 + CA264_06995 0.28 -0.3 1,614,184 + CA264_06995 0.33 -0.7 1,614,185 - CA264_06995 0.33 +0.0 1,614,481 - CA264_06995 0.81 +1.0 1,614,494 - CA264_06995 0.83 -0.6 1,614,494 - CA264_06995 0.83 +0.6 1,614,494 - CA264_06995 0.83 +0.5 1,614,512 + CA264_06995 0.86 -0.5 1,614,513 - CA264_06995 0.86 -0.1 1,614,514 + CA264_06995 0.86 +0.3 1,614,514 + CA264_06995 0.86 -0.2 1,614,514 + CA264_06995 0.86 +0.2 1,614,519 + CA264_06995 0.87 +0.1 1,614,519 + CA264_06995 0.87 -0.0 1,614,520 - CA264_06995 0.87 -0.4 1,614,547 + +0.9 1,614,547 + +0.7 1,614,548 - +0.3 1,614,551 + +0.3 1,614,551 + -0.3 1,614,551 + -0.1 1,614,552 - -0.2 1,614,614 + +0.2 1,614,666 + CA264_07000 0.11 +0.8 1,614,667 - CA264_07000 0.11 -1.7 1,614,667 - CA264_07000 0.11 -0.5 1,614,670 + CA264_07000 0.11 +2.1 1,614,670 + CA264_07000 0.11 +1.1 1,614,671 - CA264_07000 0.11 +1.0 1,614,758 - CA264_07000 0.27 +1.0 1,614,766 + CA264_07000 0.28 -0.4 1,614,766 + CA264_07000 0.28 +0.1 1,614,767 - CA264_07000 0.28 -0.2 1,614,767 - CA264_07000 0.28 +0.5 1,614,833 - CA264_07000 0.40 -0.6 1,614,890 - CA264_07000 0.50 +0.6 1,614,922 + CA264_07000 0.56 -0.1 1,614,991 + CA264_07000 0.68 +0.6 1,614,991 + CA264_07000 0.68 +0.4 1,614,992 - CA264_07000 0.68 +0.4 1,615,068 - CA264_07000 0.81 +0.2 1,615,068 - CA264_07000 0.81 +0.8 1,615,132 + -0.8 1,615,132 + +0.3 1,615,152 + -0.3 1,615,182 + -0.4 1,615,189 - -0.1 1,615,338 + CA264_07005 0.21 -0.2 1,615,340 + CA264_07005 0.21 -0.2 1,615,340 + CA264_07005 0.21 -1.5 1,615,341 - CA264_07005 0.21 +0.9 1,615,346 - CA264_07005 0.22 +0.3 1,615,348 - CA264_07005 0.22 +0.6 1,615,348 - CA264_07005 0.22 +1.1 1,615,368 + CA264_07005 0.25 +1.4 1,615,442 - CA264_07005 0.35 +0.6 1,615,480 - CA264_07005 0.41 +0.1 1,615,484 + CA264_07005 0.41 -0.3 1,615,484 + CA264_07005 0.41 +0.2 1,615,484 + CA264_07005 0.41 -0.4 1,615,484 + CA264_07005 0.41 -0.3 1,615,484 + CA264_07005 0.41 +1.6 1,615,485 - CA264_07005 0.41 -0.6 1,615,571 - CA264_07005 0.53 +0.7 1,615,611 + CA264_07005 0.59 +1.4 1,615,611 + CA264_07005 0.59 +0.7 1,615,612 - CA264_07005 0.59 -0.1 1,615,612 - CA264_07005 0.59 +0.5 1,615,716 + CA264_07005 0.73 +0.9 1,615,756 + CA264_07005 0.79 +0.1 1,615,762 + CA264_07005 0.80 -0.1 1,615,798 + CA264_07005 0.85 +0.3 1,615,799 - CA264_07005 0.85 -1.3 1,615,817 - CA264_07005 0.88 -0.4 1,615,863 + +0.7 1,615,863 + -0.9 1,615,863 + -0.6 1,615,864 - +0.4 1,615,864 - -0.4 1,615,864 - -0.1 1,615,864 - -0.6 1,615,864 - -0.6 1,615,864 - -0.7 1,615,864 - +0.1 1,615,864 - -0.0 1,615,864 - -2.0 1,615,865 + -0.0 1,615,865 + -1.3 1,615,865 + -0.3 1,615,866 - -0.2 1,615,867 + +1.7 1,615,868 - +0.1 1,615,868 - -0.4 1,615,868 - -0.7 1,615,907 - +0.5 1,615,912 - -0.2 1,615,912 - +0.6 1,615,919 - +1.6 1,615,953 + -2.0 1,615,953 + +0.8 1,615,954 - +0.5 1,615,959 + +0.4 1,615,959 + +0.9 1,615,974 - -0.6 1,616,010 + -0.0 1,616,011 - +0.9 1,616,057 + +0.2 1,616,057 + +1.1 1,616,057 + +0.6 1,616,058 - +0.1 1,616,059 + +1.3 1,616,059 + +1.9 1,616,060 - -0.2 1,616,081 - +0.5 1,616,081 - +0.4 1,616,168 - -2.1
Or see this region's nucleotide sequence