Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06340 and CA264_06345 are separated by 210 nucleotides CA264_06345 and CA264_06350 are separated by 47 nucleotides
CA264_06335: CA264_06335 - Na+/H+ antiporter subunit G, at 1,472,212 to 1,472,655
_06335
CA264_06340: CA264_06340 - protein phosphatase, at 1,472,621 to 1,473,442
_06340
CA264_06345: CA264_06345 - hypothetical protein, at 1,473,653 to 1,475,434
_06345
CA264_06350: CA264_06350 - o-succinylbenzoate synthase, at 1,475,482 to 1,476,537
_06350
Position (kb)
1473
1474
1475
1476 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1472.677 kb on - strand at 1472.719 kb on - strand, within CA264_06340 at 1472.799 kb on - strand, within CA264_06340 at 1472.799 kb on - strand, within CA264_06340 at 1472.807 kb on - strand, within CA264_06340 at 1472.807 kb on - strand, within CA264_06340 at 1472.807 kb on - strand, within CA264_06340 at 1472.815 kb on - strand, within CA264_06340 at 1472.838 kb on + strand, within CA264_06340 at 1473.105 kb on - strand, within CA264_06340 at 1473.137 kb on - strand, within CA264_06340 at 1473.282 kb on + strand, within CA264_06340 at 1473.295 kb on + strand, within CA264_06340 at 1473.307 kb on + strand, within CA264_06340 at 1473.375 kb on - strand at 1473.466 kb on - strand at 1473.472 kb on + strand at 1473.473 kb on - strand at 1473.473 kb on - strand at 1473.501 kb on + strand at 1473.503 kb on + strand at 1473.503 kb on + strand at 1473.504 kb on - strand at 1473.511 kb on - strand at 1473.524 kb on - strand at 1473.524 kb on - strand at 1473.524 kb on - strand at 1473.622 kb on + strand at 1473.623 kb on - strand at 1473.643 kb on + strand at 1473.663 kb on - strand at 1473.674 kb on - strand at 1473.789 kb on + strand at 1473.789 kb on + strand at 1473.789 kb on + strand at 1473.789 kb on + strand at 1473.790 kb on - strand at 1473.794 kb on + strand at 1473.990 kb on - strand, within CA264_06345 at 1473.990 kb on - strand, within CA264_06345 at 1474.089 kb on - strand, within CA264_06345 at 1474.312 kb on + strand, within CA264_06345 at 1474.313 kb on - strand, within CA264_06345 at 1474.358 kb on + strand, within CA264_06345 at 1474.358 kb on + strand, within CA264_06345 at 1474.358 kb on + strand, within CA264_06345 at 1474.359 kb on - strand, within CA264_06345 at 1474.359 kb on - strand, within CA264_06345 at 1474.359 kb on - strand, within CA264_06345 at 1474.397 kb on + strand, within CA264_06345 at 1474.397 kb on + strand, within CA264_06345 at 1474.397 kb on + strand, within CA264_06345 at 1474.398 kb on - strand, within CA264_06345 at 1474.398 kb on - strand, within CA264_06345 at 1474.398 kb on - strand, within CA264_06345 at 1474.400 kb on + strand, within CA264_06345 at 1474.400 kb on + strand, within CA264_06345 at 1474.400 kb on + strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.401 kb on - strand, within CA264_06345 at 1474.402 kb on + strand, within CA264_06345 at 1474.443 kb on - strand, within CA264_06345 at 1474.443 kb on - strand, within CA264_06345 at 1474.455 kb on + strand, within CA264_06345 at 1474.456 kb on - strand, within CA264_06345 at 1474.456 kb on - strand, within CA264_06345 at 1474.501 kb on + strand, within CA264_06345 at 1474.502 kb on - strand, within CA264_06345 at 1474.502 kb on - strand, within CA264_06345 at 1474.506 kb on + strand, within CA264_06345 at 1474.532 kb on + strand at 1474.533 kb on - strand, within CA264_06345 at 1474.540 kb on + strand, within CA264_06345 at 1474.540 kb on + strand, within CA264_06345 at 1474.540 kb on + strand, within CA264_06345 at 1474.542 kb on + strand, within CA264_06345 at 1474.542 kb on + strand, within CA264_06345 at 1474.542 kb on + strand, within CA264_06345 at 1474.543 kb on - strand, within CA264_06345 at 1474.543 kb on - strand, within CA264_06345 at 1474.543 kb on - strand, within CA264_06345 at 1474.676 kb on - strand, within CA264_06345 at 1474.676 kb on - strand, within CA264_06345 at 1474.717 kb on + strand, within CA264_06345 at 1474.717 kb on + strand, within CA264_06345 at 1474.717 kb on + strand, within CA264_06345 at 1474.718 kb on - strand, within CA264_06345 at 1474.718 kb on - strand, within CA264_06345 at 1474.796 kb on - strand, within CA264_06345 at 1474.891 kb on + strand, within CA264_06345 at 1474.891 kb on + strand, within CA264_06345 at 1474.891 kb on + strand, within CA264_06345 at 1474.892 kb on - strand, within CA264_06345 at 1474.892 kb on - strand, within CA264_06345 at 1474.931 kb on + strand, within CA264_06345 at 1474.932 kb on - strand, within CA264_06345 at 1474.946 kb on + strand, within CA264_06345 at 1474.969 kb on + strand, within CA264_06345 at 1475.012 kb on - strand, within CA264_06345 at 1475.204 kb on - strand, within CA264_06345 at 1475.222 kb on + strand, within CA264_06345 at 1475.223 kb on - strand, within CA264_06345 at 1475.223 kb on - strand, within CA264_06345 at 1475.223 kb on - strand, within CA264_06345 at 1475.223 kb on - strand, within CA264_06345 at 1475.277 kb on - strand at 1475.277 kb on - strand at 1475.285 kb on - strand at 1475.298 kb on + strand at 1475.298 kb on + strand at 1475.298 kb on + strand at 1475.357 kb on + strand at 1475.358 kb on - strand at 1475.410 kb on + strand at 1475.413 kb on + strand at 1475.488 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,472,677 - -0.7 1,472,719 - CA264_06340 0.12 +0.0 1,472,799 - CA264_06340 0.22 +0.2 1,472,799 - CA264_06340 0.22 +0.2 1,472,807 - CA264_06340 0.23 -0.1 1,472,807 - CA264_06340 0.23 -0.3 1,472,807 - CA264_06340 0.23 +0.9 1,472,815 - CA264_06340 0.24 -0.6 1,472,838 + CA264_06340 0.26 -1.4 1,473,105 - CA264_06340 0.59 -0.1 1,473,137 - CA264_06340 0.63 +0.1 1,473,282 + CA264_06340 0.80 -1.9 1,473,295 + CA264_06340 0.82 +0.0 1,473,307 + CA264_06340 0.83 +0.4 1,473,375 - +0.6 1,473,466 - -0.7 1,473,472 + -0.5 1,473,473 - -1.3 1,473,473 - -0.1 1,473,501 + -1.4 1,473,503 + -0.9 1,473,503 + -0.6 1,473,504 - -1.5 1,473,511 - -0.7 1,473,524 - -2.1 1,473,524 - -1.5 1,473,524 - -2.1 1,473,622 + +0.4 1,473,623 - +0.1 1,473,643 + -0.3 1,473,663 - +1.4 1,473,674 - +0.5 1,473,789 + +0.3 1,473,789 + +0.6 1,473,789 + +0.9 1,473,789 + +0.2 1,473,790 - +0.4 1,473,794 + +0.4 1,473,990 - CA264_06345 0.19 -0.4 1,473,990 - CA264_06345 0.19 +0.2 1,474,089 - CA264_06345 0.24 -0.3 1,474,312 + CA264_06345 0.37 +0.7 1,474,313 - CA264_06345 0.37 +0.9 1,474,358 + CA264_06345 0.40 +0.6 1,474,358 + CA264_06345 0.40 +0.0 1,474,358 + CA264_06345 0.40 +0.7 1,474,359 - CA264_06345 0.40 +0.4 1,474,359 - CA264_06345 0.40 +0.4 1,474,359 - CA264_06345 0.40 +0.5 1,474,397 + CA264_06345 0.42 +0.0 1,474,397 + CA264_06345 0.42 -0.2 1,474,397 + CA264_06345 0.42 +1.1 1,474,398 - CA264_06345 0.42 +0.3 1,474,398 - CA264_06345 0.42 +0.6 1,474,398 - CA264_06345 0.42 +1.5 1,474,400 + CA264_06345 0.42 +1.0 1,474,400 + CA264_06345 0.42 +0.2 1,474,400 + CA264_06345 0.42 +0.9 1,474,401 - CA264_06345 0.42 -1.0 1,474,401 - CA264_06345 0.42 +0.5 1,474,401 - CA264_06345 0.42 +0.5 1,474,401 - CA264_06345 0.42 +0.2 1,474,402 + CA264_06345 0.42 +1.0 1,474,443 - CA264_06345 0.44 +0.5 1,474,443 - CA264_06345 0.44 +0.7 1,474,455 + CA264_06345 0.45 +0.6 1,474,456 - CA264_06345 0.45 +0.4 1,474,456 - CA264_06345 0.45 -0.7 1,474,501 + CA264_06345 0.48 +1.1 1,474,502 - CA264_06345 0.48 +0.7 1,474,502 - CA264_06345 0.48 +1.6 1,474,506 + CA264_06345 0.48 +0.6 1,474,532 + +0.1 1,474,533 - CA264_06345 0.49 +0.8 1,474,540 + CA264_06345 0.50 +1.2 1,474,540 + CA264_06345 0.50 +1.0 1,474,540 + CA264_06345 0.50 +1.1 1,474,542 + CA264_06345 0.50 +1.2 1,474,542 + CA264_06345 0.50 +1.0 1,474,542 + CA264_06345 0.50 +0.5 1,474,543 - CA264_06345 0.50 +0.8 1,474,543 - CA264_06345 0.50 +1.7 1,474,543 - CA264_06345 0.50 -0.3 1,474,676 - CA264_06345 0.57 +1.6 1,474,676 - CA264_06345 0.57 +1.3 1,474,717 + CA264_06345 0.60 +1.2 1,474,717 + CA264_06345 0.60 +1.0 1,474,717 + CA264_06345 0.60 +1.3 1,474,718 - CA264_06345 0.60 +0.8 1,474,718 - CA264_06345 0.60 +0.9 1,474,796 - CA264_06345 0.64 +0.8 1,474,891 + CA264_06345 0.69 +0.4 1,474,891 + CA264_06345 0.69 +1.2 1,474,891 + CA264_06345 0.69 +2.1 1,474,892 - CA264_06345 0.70 +0.5 1,474,892 - CA264_06345 0.70 -1.0 1,474,931 + CA264_06345 0.72 +2.1 1,474,932 - CA264_06345 0.72 +0.9 1,474,946 + CA264_06345 0.73 +0.9 1,474,969 + CA264_06345 0.74 +0.9 1,475,012 - CA264_06345 0.76 +0.9 1,475,204 - CA264_06345 0.87 +0.9 1,475,222 + CA264_06345 0.88 +1.2 1,475,223 - CA264_06345 0.88 +0.5 1,475,223 - CA264_06345 0.88 +1.0 1,475,223 - CA264_06345 0.88 +0.5 1,475,223 - CA264_06345 0.88 +0.6 1,475,277 - +1.3 1,475,277 - +2.1 1,475,285 - +2.3 1,475,298 + +1.4 1,475,298 + +1.0 1,475,298 + +1.1 1,475,357 + +1.1 1,475,358 - +0.9 1,475,410 + +1.4 1,475,413 + +1.3 1,475,488 - +0.6
Or see this region's nucleotide sequence