Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04635 and CA264_04640 overlap by 17 nucleotides CA264_04640 and CA264_04645 are separated by 2 nucleotides CA264_04645 and CA264_04650 are separated by 0 nucleotides
CA264_04635: CA264_04635 - riboflavin biosynthesis protein RibF, at 1,072,938 to 1,073,870
_04635
CA264_04640: CA264_04640 - tRNA pseudouridine(55) synthase, at 1,073,854 to 1,074,552
_04640
CA264_04645: CA264_04645 - UDP-diphosphatase, at 1,074,555 to 1,075,388
_04645
CA264_04650: CA264_04650 - hypothetical protein, at 1,075,389 to 1,075,607
_04650
Position (kb)
1073
1074
1075 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1072.924 kb on + strand at 1072.925 kb on - strand at 1072.940 kb on - strand at 1073.850 kb on + strand at 1073.862 kb on + strand at 1073.862 kb on + strand at 1073.937 kb on + strand, within CA264_04640 at 1073.937 kb on + strand, within CA264_04640 at 1073.937 kb on + strand, within CA264_04640 at 1073.937 kb on + strand, within CA264_04640 at 1073.938 kb on - strand, within CA264_04640 at 1074.022 kb on + strand, within CA264_04640 at 1074.023 kb on - strand, within CA264_04640 at 1074.026 kb on + strand, within CA264_04640 at 1074.026 kb on + strand, within CA264_04640 at 1074.027 kb on - strand, within CA264_04640 at 1074.043 kb on + strand, within CA264_04640 at 1074.043 kb on + strand, within CA264_04640 at 1074.043 kb on + strand, within CA264_04640 at 1074.044 kb on - strand, within CA264_04640 at 1074.046 kb on + strand, within CA264_04640 at 1074.047 kb on - strand, within CA264_04640 at 1074.052 kb on - strand, within CA264_04640 at 1074.052 kb on - strand, within CA264_04640 at 1074.185 kb on + strand, within CA264_04640 at 1074.326 kb on - strand, within CA264_04640 at 1074.326 kb on - strand, within CA264_04640 at 1074.326 kb on - strand, within CA264_04640 at 1074.328 kb on - strand, within CA264_04640 at 1074.328 kb on - strand, within CA264_04640 at 1074.339 kb on - strand, within CA264_04640 at 1074.515 kb on - strand at 1074.515 kb on - strand at 1074.515 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.517 kb on - strand at 1074.552 kb on + strand at 1074.552 kb on + strand at 1074.552 kb on + strand at 1074.556 kb on + strand at 1074.556 kb on + strand at 1074.557 kb on - strand at 1074.557 kb on - strand at 1075.403 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,072,924 + -0.0 1,072,925 - -0.0 1,072,940 - +0.7 1,073,850 + -0.3 1,073,862 + -1.6 1,073,862 + +0.4 1,073,937 + CA264_04640 0.12 -1.5 1,073,937 + CA264_04640 0.12 -0.2 1,073,937 + CA264_04640 0.12 -0.6 1,073,937 + CA264_04640 0.12 -0.4 1,073,938 - CA264_04640 0.12 -0.9 1,074,022 + CA264_04640 0.24 -1.2 1,074,023 - CA264_04640 0.24 -0.3 1,074,026 + CA264_04640 0.25 -0.2 1,074,026 + CA264_04640 0.25 -0.8 1,074,027 - CA264_04640 0.25 +0.1 1,074,043 + CA264_04640 0.27 -0.8 1,074,043 + CA264_04640 0.27 -0.3 1,074,043 + CA264_04640 0.27 +0.0 1,074,044 - CA264_04640 0.27 -0.7 1,074,046 + CA264_04640 0.27 -0.6 1,074,047 - CA264_04640 0.28 -0.3 1,074,052 - CA264_04640 0.28 -0.4 1,074,052 - CA264_04640 0.28 -1.0 1,074,185 + CA264_04640 0.47 -1.9 1,074,326 - CA264_04640 0.68 +0.4 1,074,326 - CA264_04640 0.68 -0.2 1,074,326 - CA264_04640 0.68 -1.0 1,074,328 - CA264_04640 0.68 -1.0 1,074,328 - CA264_04640 0.68 -0.2 1,074,339 - CA264_04640 0.69 +1.8 1,074,515 - -0.6 1,074,515 - +1.6 1,074,515 - -1.2 1,074,517 - -1.0 1,074,517 - -0.8 1,074,517 - -0.2 1,074,517 - -1.0 1,074,517 - -0.4 1,074,552 + -1.3 1,074,552 + -2.7 1,074,552 + -2.9 1,074,556 + -2.1 1,074,556 + -2.7 1,074,557 - +0.3 1,074,557 - -1.2 1,075,403 + -0.5
Or see this region's nucleotide sequence