Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02110 and CA264_02115 are separated by 83 nucleotides CA264_02115 and CA264_02120 are separated by 78 nucleotides CA264_02120 and CA264_02125 are separated by 186 nucleotides CA264_02125 and CA264_02130 are separated by 255 nucleotides
CA264_02110: CA264_02110 - lauroyl acyltransferase, at 488,004 to 488,924
_02110
CA264_02115: CA264_02115 - threonylcarbamoyl-AMP synthase, at 489,008 to 489,634
_02115
CA264_02120: CA264_02120 - GNAT family N-acetyltransferase, at 489,713 to 490,270
_02120
CA264_02125: CA264_02125 - alpha/beta hydrolase, at 490,457 to 490,996
_02125
CA264_02130: CA264_02130 - pseudouridine synthase, at 491,252 to 491,926
_02130
Position (kb) 489
490
491 Strain fitness (log2 ratio) -2
-1
0
1
2 at 488.937 kb on - strand at 488.970 kb on + strand at 488.989 kb on - strand at 488.994 kb on + strand at 489.168 kb on + strand, within CA264_02115 at 489.268 kb on + strand, within CA264_02115 at 489.335 kb on - strand, within CA264_02115 at 489.369 kb on + strand, within CA264_02115 at 489.369 kb on + strand, within CA264_02115 at 489.369 kb on + strand, within CA264_02115 at 489.461 kb on + strand, within CA264_02115 at 489.461 kb on + strand, within CA264_02115 at 489.517 kb on - strand, within CA264_02115 at 489.517 kb on - strand, within CA264_02115 at 489.640 kb on + strand at 489.640 kb on + strand at 489.641 kb on - strand at 489.658 kb on + strand at 489.658 kb on + strand at 489.658 kb on + strand at 489.659 kb on - strand at 489.659 kb on - strand at 489.659 kb on - strand at 489.664 kb on - strand at 489.664 kb on - strand at 489.669 kb on + strand at 489.795 kb on - strand, within CA264_02120 at 489.795 kb on - strand, within CA264_02120 at 489.863 kb on + strand, within CA264_02120 at 489.864 kb on - strand, within CA264_02120 at 489.869 kb on + strand, within CA264_02120 at 489.900 kb on + strand, within CA264_02120 at 489.900 kb on + strand, within CA264_02120 at 489.901 kb on - strand, within CA264_02120 at 489.901 kb on - strand, within CA264_02120 at 490.007 kb on - strand, within CA264_02120 at 490.095 kb on + strand, within CA264_02120 at 490.276 kb on + strand at 490.290 kb on - strand at 490.292 kb on + strand at 490.292 kb on + strand at 490.292 kb on + strand at 490.298 kb on + strand at 490.305 kb on + strand at 490.428 kb on + strand at 490.429 kb on - strand at 490.429 kb on - strand at 490.431 kb on - strand at 490.431 kb on - strand at 490.456 kb on + strand at 490.474 kb on + strand at 490.475 kb on - strand at 490.476 kb on + strand at 490.477 kb on - strand at 490.483 kb on - strand at 490.819 kb on + strand, within CA264_02125 at 490.832 kb on - strand, within CA264_02125 at 490.847 kb on + strand, within CA264_02125 at 490.847 kb on + strand, within CA264_02125 at 490.847 kb on + strand, within CA264_02125 at 490.848 kb on - strand, within CA264_02125 at 490.848 kb on - strand, within CA264_02125 at 490.848 kb on - strand, within CA264_02125 at 490.899 kb on - strand, within CA264_02125 at 490.928 kb on - strand, within CA264_02125 at 491.034 kb on - strand at 491.128 kb on + strand at 491.164 kb on + strand at 491.194 kb on + strand at 491.194 kb on + strand at 491.194 kb on + strand at 491.194 kb on + strand at 491.195 kb on - strand at 491.195 kb on - strand at 491.200 kb on + strand at 491.200 kb on + strand at 491.200 kb on + strand at 491.201 kb on - strand at 491.207 kb on + strand at 491.207 kb on + strand at 491.208 kb on - strand at 491.257 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 488,937 - +1.9 488,970 + +0.1 488,989 - -0.8 488,994 + +0.3 489,168 + CA264_02115 0.26 +0.1 489,268 + CA264_02115 0.41 -1.0 489,335 - CA264_02115 0.52 +0.8 489,369 + CA264_02115 0.58 -0.6 489,369 + CA264_02115 0.58 -0.5 489,369 + CA264_02115 0.58 +0.2 489,461 + CA264_02115 0.72 +0.7 489,461 + CA264_02115 0.72 +0.2 489,517 - CA264_02115 0.81 +0.3 489,517 - CA264_02115 0.81 +0.2 489,640 + +1.2 489,640 + -0.2 489,641 - +0.7 489,658 + +0.1 489,658 + -0.1 489,658 + +0.1 489,659 - -0.1 489,659 - +0.2 489,659 - +0.7 489,664 - +2.7 489,664 - +0.4 489,669 + -2.2 489,795 - CA264_02120 0.15 -0.6 489,795 - CA264_02120 0.15 +0.8 489,863 + CA264_02120 0.27 +0.9 489,864 - CA264_02120 0.27 +1.5 489,869 + CA264_02120 0.28 +0.6 489,900 + CA264_02120 0.34 -0.4 489,900 + CA264_02120 0.34 -0.1 489,901 - CA264_02120 0.34 +1.7 489,901 - CA264_02120 0.34 -0.4 490,007 - CA264_02120 0.53 +0.8 490,095 + CA264_02120 0.68 +0.6 490,276 + +0.0 490,290 - +0.5 490,292 + +1.8 490,292 + +0.0 490,292 + +1.1 490,298 + -1.3 490,305 + +0.4 490,428 + +0.9 490,429 - -0.2 490,429 - +1.6 490,431 - +0.7 490,431 - -0.3 490,456 + -2.2 490,474 + -0.6 490,475 - +1.8 490,476 + +0.6 490,477 - +1.2 490,483 - +0.2 490,819 + CA264_02125 0.67 -0.0 490,832 - CA264_02125 0.69 +1.0 490,847 + CA264_02125 0.72 +0.3 490,847 + CA264_02125 0.72 +0.3 490,847 + CA264_02125 0.72 -1.2 490,848 - CA264_02125 0.72 +0.2 490,848 - CA264_02125 0.72 +1.0 490,848 - CA264_02125 0.72 -0.1 490,899 - CA264_02125 0.82 +0.7 490,928 - CA264_02125 0.87 +1.0 491,034 - -0.2 491,128 + -0.1 491,164 + +0.3 491,194 + -0.1 491,194 + -1.4 491,194 + +0.3 491,194 + -1.4 491,195 - -0.1 491,195 - +0.6 491,200 + -0.2 491,200 + +0.3 491,200 + -0.3 491,201 - +0.0 491,207 + +0.2 491,207 + -0.9 491,208 - +0.6 491,257 + +0.1
Or see this region's nucleotide sequence