Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12895 and PS417_12900 are separated by 77 nucleotides PS417_12900 and PS417_12905 are separated by 100 nucleotides PS417_12905 and PS417_12910 are separated by 286 nucleotides
PS417_12895: PS417_12895 - pyruvate dehydrogenase, at 2,819,736 to 2,822,402
_12895
PS417_12900: PS417_12900 - Fe-S protein, at 2,822,480 to 2,822,968
_12900
PS417_12905: PS417_12905 - ribonucleotide-diphosphate reductase subunit beta, at 2,823,069 to 2,824,319
_12905
PS417_12910: PS417_12910 - alanine racemase, at 2,824,606 to 2,825,703
_12910
Position (kb)
2823
2824
2825 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2822.151 kb on + strand at 2822.151 kb on + strand at 2822.152 kb on - strand at 2822.184 kb on + strand at 2822.184 kb on + strand at 2822.185 kb on - strand at 2822.185 kb on - strand at 2822.185 kb on - strand at 2822.185 kb on - strand at 2822.538 kb on + strand, within PS417_12900 at 2822.538 kb on + strand, within PS417_12900 at 2822.538 kb on + strand, within PS417_12900 at 2822.538 kb on + strand, within PS417_12900 at 2822.539 kb on - strand, within PS417_12900 at 2822.692 kb on - strand, within PS417_12900 at 2822.980 kb on - strand at 2823.063 kb on + strand at 2823.101 kb on - strand at 2824.325 kb on + strand at 2824.388 kb on - strand at 2824.388 kb on - strand at 2824.390 kb on + strand at 2824.390 kb on + strand at 2824.391 kb on - strand at 2824.403 kb on - strand at 2824.423 kb on + strand at 2824.434 kb on - strand at 2824.443 kb on + strand at 2824.444 kb on - strand at 2824.444 kb on - strand at 2824.448 kb on - strand at 2824.448 kb on - strand at 2824.475 kb on + strand at 2824.475 kb on + strand at 2824.475 kb on + strand at 2824.476 kb on - strand at 2824.476 kb on - strand at 2824.476 kb on - strand at 2824.476 kb on - strand at 2824.476 kb on - strand at 2824.477 kb on + strand at 2824.477 kb on + strand at 2824.477 kb on + strand at 2824.477 kb on + strand at 2824.478 kb on - strand at 2824.478 kb on - strand at 2824.604 kb on + strand at 2824.605 kb on - strand at 2824.630 kb on + strand at 2824.631 kb on - strand at 2824.636 kb on + strand at 2824.636 kb on + strand at 2824.636 kb on + strand at 2824.664 kb on + strand at 2824.987 kb on + strand, within PS417_12910 at 2824.988 kb on - strand, within PS417_12910 at 2825.009 kb on - strand, within PS417_12910 at 2825.009 kb on - strand, within PS417_12910 at 2825.009 kb on - strand, within PS417_12910 at 2825.009 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 2,822,151 + -0.6 2,822,151 + -0.0 2,822,152 - +0.2 2,822,184 + -0.3 2,822,184 + -0.2 2,822,185 - -0.0 2,822,185 - +0.9 2,822,185 - +0.1 2,822,185 - -0.2 2,822,538 + PS417_12900 0.12 -0.1 2,822,538 + PS417_12900 0.12 +0.3 2,822,538 + PS417_12900 0.12 -0.8 2,822,538 + PS417_12900 0.12 -0.1 2,822,539 - PS417_12900 0.12 -1.5 2,822,692 - PS417_12900 0.43 +0.7 2,822,980 - +1.2 2,823,063 + +0.4 2,823,101 - +0.1 2,824,325 + +0.0 2,824,388 - -0.2 2,824,388 - -0.6 2,824,390 + +0.2 2,824,390 + +0.4 2,824,391 - +0.2 2,824,403 - -0.1 2,824,423 + +0.4 2,824,434 - +0.1 2,824,443 + -0.2 2,824,444 - -0.2 2,824,444 - -0.3 2,824,448 - +0.6 2,824,448 - +0.9 2,824,475 + +0.3 2,824,475 + -0.6 2,824,475 + +0.0 2,824,476 - -0.6 2,824,476 - +1.4 2,824,476 - +0.8 2,824,476 - -0.2 2,824,476 - +0.4 2,824,477 + +0.3 2,824,477 + -0.6 2,824,477 + -1.8 2,824,477 + -0.3 2,824,478 - +0.8 2,824,478 - +1.6 2,824,604 + -0.3 2,824,605 - +0.5 2,824,630 + -0.2 2,824,631 - +0.2 2,824,636 + +2.2 2,824,636 + -0.2 2,824,636 + +0.3 2,824,664 + -2.4 2,824,987 + PS417_12910 0.35 +0.8 2,824,988 - PS417_12910 0.35 +0.1 2,825,009 - PS417_12910 0.37 +0.7 2,825,009 - PS417_12910 0.37 +0.3 2,825,009 - PS417_12910 0.37 +0.3 2,825,009 - +0.4
Or see this region's nucleotide sequence