Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3379

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,984,054	+				-0.2
3,984,055	-				+0.0
3,984,055	-				-1.5
3,984,055	-				+0.7
3,984,057	+				+0.5
3,984,057	+				+0.1
3,984,058	-				+0.7
3,984,058	-				-1.5
3,984,058	-				-1.4
3,984,058	-				+0.9
3,984,061	+				+0.5
3,984,061	+				-0.5
3,984,097	+				-1.7
3,984,097	+				-1.4
3,984,131	-				-2.3
3,984,131	-				-0.7
3,984,148	+				-0.8
3,984,148	+				+0.3
3,984,149	-				+0.6
3,984,149	-				-0.2
3,984,186	-				+1.4
3,984,201	+				-0.4
3,984,202	-				+1.9
3,984,202	-				+1.4
3,984,210	+				+0.7
3,984,213	-				+0.5
3,984,222	+				+0.4
3,984,222	+				-0.7
3,984,222	+				+1.5
3,984,222	+				-1.9
3,984,223	-				+0.3
3,984,223	-				+0.8
3,984,223	-				+1.2
3,984,225	+				-0.4
3,984,226	-				+0.8
3,984,282	+		Echvi_3377	0.21	-1.2
3,984,283	-		Echvi_3377	0.22	-1.0
3,984,356	-		Echvi_3377	0.37	+0.4
3,984,356	-		Echvi_3377	0.37	-0.9
3,984,427	-		Echvi_3377	0.53	+0.2
3,984,471	+		Echvi_3377	0.63	+0.6
3,984,564	+		Echvi_3377	0.83	-0.5
3,984,565	-		Echvi_3377	0.83	-0.6
3,984,565	-		Echvi_3377	0.83	-0.0
3,984,606	-				+0.0
3,984,755	-		Echvi_3378	0.17	-0.1
3,984,765	-		Echvi_3378	0.20	-0.8
3,984,844	-		Echvi_3378	0.46	-2.6
3,984,845	+		Echvi_3378	0.46	+0.1
3,984,846	-		Echvi_3378	0.47	-3.1
3,984,905	-		Echvi_3378	0.66	-0.4
3,984,943	+		Echvi_3378	0.78	-2.1
3,984,963	+		Echvi_3378	0.85	+0.0
3,984,983	-				-0.7
3,984,997	-				-1.8
3,985,033	-				-0.1
3,985,036	-				-0.1
3,985,036	-				+0.2
3,985,072	+				-0.8
3,985,072	+				-1.1
3,985,073	-				-1.3
3,985,192	-				+1.2
3,985,202	+		Echvi_3379	0.10	-0.1
3,985,202	+		Echvi_3379	0.10	+0.2
3,985,202	+		Echvi_3379	0.10	-1.5
3,985,203	-		Echvi_3379	0.10	-0.4
3,985,314	+		Echvi_3379	0.16	+0.3
3,985,315	-		Echvi_3379	0.16	+0.5
3,985,346	+		Echvi_3379	0.18	-1.8
3,985,347	-		Echvi_3379	0.18	+2.2
3,985,351	+		Echvi_3379	0.18	-0.9
3,985,370	+		Echvi_3379	0.19	-0.3
3,985,394	+		Echvi_3379	0.21	-0.5
3,985,412	+		Echvi_3379	0.22	+0.7
3,985,413	-		Echvi_3379	0.22	+0.4
3,985,493	+		Echvi_3379	0.26	+0.3
3,985,494	-		Echvi_3379	0.26	-0.7
3,985,708	+		Echvi_3379	0.38	+0.9
3,985,709	-		Echvi_3379	0.38	-0.4
3,985,709	-		Echvi_3379	0.38	+0.9
3,985,715	-		Echvi_3379	0.38	-0.2
3,985,715	-		Echvi_3379	0.38	-1.1
3,985,715	-		Echvi_3379	0.38	+0.1
3,985,718	-		Echvi_3379	0.38	+1.1
3,985,748	+		Echvi_3379	0.40	+0.2
3,985,780	+		Echvi_3379	0.41	-0.2
3,985,780	+		Echvi_3379	0.41	+0.3
3,985,781	-		Echvi_3379	0.42	-0.8
3,985,781	-		Echvi_3379	0.42	+0.8
3,985,892	+		Echvi_3379	0.48	+0.6
3,985,935	+		Echvi_3379	0.50	+0.2
3,985,935	+		Echvi_3379	0.50	+0.4
3,986,070	+		Echvi_3379	0.57	+0.3
3,986,070	+		Echvi_3379	0.57	+0.1
3,986,100	+		Echvi_3379	0.59	+0.8
3,986,100	+		Echvi_3379	0.59	-0.5
3,986,101	-				+0.9
3,986,101	-		Echvi_3379	0.59	+1.9
3,986,117	-		Echvi_3379	0.60	-0.4
3,986,117	-		Echvi_3379	0.60	-0.5
3,986,117	-		Echvi_3379	0.60	+0.2
3,986,117	-		Echvi_3379	0.60	-0.7
3,986,165	-		Echvi_3379	0.62	+0.5
3,986,167	+		Echvi_3379	0.62	+0.7
3,986,167	+		Echvi_3379	0.62	+0.6
3,986,168	-		Echvi_3379	0.62	+0.2
3,986,168	-		Echvi_3379	0.62	+0.6
3,986,168	-		Echvi_3379	0.62	-0.4
3,986,168	-		Echvi_3379	0.62	+0.1
3,986,201	-		Echvi_3379	0.64	+0.3
3,986,201	-		Echvi_3379	0.64	+1.2
3,986,206	+		Echvi_3379	0.65	-0.4
3,986,206	+		Echvi_3379	0.65	-0.3
3,986,285	-		Echvi_3379	0.69	-0.7
3,986,357	+		Echvi_3379	0.73	+0.1
3,986,357	+		Echvi_3379	0.73	+0.0
3,986,455	+		Echvi_3379	0.78	+0.1
3,986,455	+		Echvi_3379	0.78	+0.3
3,986,456	-		Echvi_3379	0.78	+0.7
3,986,456	-		Echvi_3379	0.78	+0.6
3,986,456	-		Echvi_3379	0.78	+0.5
3,986,511	-		Echvi_3379	0.81	+0.2
3,986,511	-		Echvi_3379	0.81	+1.6
3,986,511	-		Echvi_3379	0.81	-0.4
3,986,511	-		Echvi_3379	0.81	+0.0
3,986,529	+		Echvi_3379	0.82	+0.7
3,986,530	-		Echvi_3379	0.82	-0.6
3,986,530	-		Echvi_3379	0.82	+0.0
3,986,551	+		Echvi_3379	0.83	-0.1
3,986,586	+		Echvi_3379	0.85	+0.5
3,986,587	-		Echvi_3379	0.85	+0.3
3,986,610	+		Echvi_3379	0.86	+0.4
3,986,610	+		Echvi_3379	0.86	-0.6
3,986,610	+		Echvi_3379	0.86	-0.3
3,986,657	+		Echvi_3379	0.89	+0.1
3,986,658	-		Echvi_3379	0.89	+0.5
3,986,755	+				+0.8
3,986,755	+				-0.1
3,986,755	+				-0.2
3,986,755	+				+0.3
3,986,756	-				-0.3
3,986,756	-				-0.7
3,986,756	-				+0.0
3,986,756	-				-0.5
3,986,756	-				+0.7
3,986,756	-				-0.7
3,986,775	-				+0.7
3,986,775	-				-0.2
3,986,826	+				-0.2
3,986,879	+				+0.9
3,986,901	+				-0.7
3,986,901	+				-1.3
3,986,901	+				-0.5
3,986,901	+				-1.2
3,986,901	+				-1.3
3,986,901	+				-1.9
3,986,901	+				-0.7
3,986,902	-				-1.1
3,986,902	-				-2.2
3,986,902	-				-1.8
3,986,902	-				-1.8
3,986,902	-				-0.7
3,986,907	+				-1.1
3,986,908	-				-2.7
3,986,963	+		Echvi_3380	0.13	-1.5
3,986,963	+		Echvi_3380	0.13	-1.7
3,987,665	-				-0.2
3,987,665	-				+0.6
3,987,669	-				-0.2
3,987,715	+				-0.7
3,987,716	-				-1.2
3,987,723	+				+0.4
3,987,723	+				+0.2
3,987,723	+				-0.3
3,987,723	+				-1.2
3,987,723	+				-0.8
3,987,723	+				-1.1
3,987,724	-				+0.5
3,987,724	-				+0.1
3,987,724	-				-0.1
3,987,724	-				-0.2
3,987,725	+				+0.2
3,987,725	+				+1.3
3,987,725	+				-0.1
3,987,725	+				-0.1
3,987,734	-				+1.0
3,987,734	-				+0.6
3,987,755	-				+0.3
3,987,755	-				+1.9
3,987,755	-				+0.7
3,987,757	+				-0.6
3,987,760	+				-1.2
3,987,761	-				-0.1
3,987,836	-				+0.3
3,987,837	+				-0.4
3,987,838	-				-2.2