Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1977

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
2,327,266	-				+0.4
2,327,266	-				+1.1
2,327,278	+				+0.9
2,327,284	+				-0.6
2,327,285	-				+0.2
2,327,285	-				+0.4
2,327,303	-				-0.4
2,327,309	+				+0.6
2,327,343	-				-0.0
2,327,374	-				+1.0
2,327,381	-				-0.5
2,327,390	+				-0.6
2,327,390	+				+0.4
2,327,391	-				-0.3
2,327,394	+				-0.7
2,327,394	+				+0.1
2,327,394	+				-0.8
2,327,394	+				-0.3
2,327,394	+				-1.0
2,327,399	+				+0.7
2,327,412	+				+0.2
2,327,455	+				-0.7
2,327,478	+				-0.3
2,327,533	+		Echvi_1975	0.22	-0.7
2,327,534	-		Echvi_1975	0.22	-0.2
2,327,534	-		Echvi_1975	0.22	+1.4
2,327,534	-		Echvi_1975	0.22	-1.1
2,327,564	-		Echvi_1975	0.29	+1.2
2,327,596	-		Echvi_1975	0.37	+0.7
2,327,617	-		Echvi_1975	0.43	+0.8
2,327,658	+		Echvi_1975	0.53	-0.2
2,327,658	+		Echvi_1975	0.53	-1.0
2,327,658	+		Echvi_1975	0.53	+0.9
2,327,659	-		Echvi_1975	0.53	-0.4
2,327,659	-		Echvi_1975	0.53	-1.4
2,327,675	+		Echvi_1975	0.57	+1.2
2,327,715	-		Echvi_1975	0.67	+0.4
2,327,720	+		Echvi_1975	0.68	+0.6
2,327,765	-		Echvi_1975	0.80	-1.8
2,327,767	+		Echvi_1975	0.80	-1.8
2,327,811	-				-0.4
2,327,819	+				+0.9
2,327,838	+				+0.3
2,327,846	-				+0.5
2,327,847	+				-0.5
2,327,847	+				+0.6
2,327,847	+				+2.2
2,327,847	+				-0.9
2,327,847	+				-0.1
2,327,847	+				+0.7
2,327,850	+				+0.6
2,327,850	+				+0.2
2,327,860	+				+0.1
2,327,901	+		Echvi_1976	0.18	+0.7
2,327,937	+		Echvi_1976	0.29	+0.6
2,327,937	+		Echvi_1976	0.29	-0.1
2,327,938	-		Echvi_1976	0.29	+0.3
2,327,953	+		Echvi_1976	0.33	-0.1
2,327,955	+		Echvi_1976	0.34	+0.7
2,327,956	-		Echvi_1976	0.34	+0.6
2,327,992	-		Echvi_1976	0.45	+0.0
2,328,011	-		Echvi_1976	0.51	-0.4
2,328,061	+		Echvi_1976	0.66	+0.9
2,328,062	-		Echvi_1976	0.66	+1.7
2,328,062	-		Echvi_1976	0.66	+0.7
2,328,070	-		Echvi_1976	0.68	+1.3
2,328,070	-		Echvi_1976	0.68	-1.7
2,328,072	-		Echvi_1976	0.69	-0.6
2,328,151	+				+1.1
2,328,174	+				-1.9
2,328,180	-				+1.3
2,328,182	+				+2.5
2,328,183	-				+1.6
2,328,187	-				-1.1
2,328,232	+				+1.1
2,328,235	+				-1.2
2,328,259	-				+2.2
2,328,278	+				-0.9
2,328,278	+				+0.0
2,328,283	+				-1.0
2,328,393	-				-1.0
2,328,394	+				-1.3
2,328,394	+				-0.5
2,328,462	+		Echvi_1977	0.11	-0.3
2,328,468	+		Echvi_1977	0.12	+1.7
2,328,468	+		Echvi_1977	0.12	+0.5
2,328,468	+		Echvi_1977	0.12	+0.6
2,328,468	+		Echvi_1977	0.12	-0.4
2,328,468	+		Echvi_1977	0.12	+0.0
2,328,469	-		Echvi_1977	0.12	-1.1
2,328,469	-		Echvi_1977	0.12	+0.4
2,328,470	+		Echvi_1977	0.12	+1.2
2,328,470	+		Echvi_1977	0.12	-1.3
2,328,471	-		Echvi_1977	0.12	+0.8
2,328,471	-		Echvi_1977	0.12	+0.4
2,328,563	+		Echvi_1977	0.17	-0.3
2,328,563	+		Echvi_1977	0.17	-0.2
2,328,575	+				+2.2
2,328,575	+		Echvi_1977	0.17	-1.5
2,328,575	+		Echvi_1977	0.17	-0.3
2,328,593	+		Echvi_1977	0.18	-0.2
2,328,651	-		Echvi_1977	0.21	+0.0
2,328,700	-		Echvi_1977	0.23	+0.2
2,328,700	-		Echvi_1977	0.23	-0.2
2,328,700	-		Echvi_1977	0.23	+0.6
2,328,732	+		Echvi_1977	0.25	+0.7
2,328,733	-		Echvi_1977	0.25	+1.0
2,328,741	-		Echvi_1977	0.25	-0.0
2,328,741	-		Echvi_1977	0.25	-0.6
2,328,742	+		Echvi_1977	0.26	+0.5
2,328,773	+		Echvi_1977	0.27	-0.9
2,328,774	-		Echvi_1977	0.27	-0.6
2,328,793	-		Echvi_1977	0.28	-1.9
2,328,840	+		Echvi_1977	0.30	+0.2
2,328,896	+		Echvi_1977	0.33	-0.1
2,328,896	+		Echvi_1977	0.33	+0.3
2,328,897	-		Echvi_1977	0.33	-0.2
2,328,897	-		Echvi_1977	0.33	+0.4
2,328,898	+		Echvi_1977	0.33	+0.6
2,328,899	-		Echvi_1977	0.33	+0.8
2,328,988	-		Echvi_1977	0.38	+0.4
2,329,011	+		Echvi_1977	0.39	-0.0
2,329,011	+		Echvi_1977	0.39	-0.1
2,329,012	-		Echvi_1977	0.39	+1.9
2,329,012	-		Echvi_1977	0.39	+0.6
2,329,012	-		Echvi_1977	0.39	+0.4
2,329,015	+		Echvi_1977	0.39	-1.8
2,329,016	-		Echvi_1977	0.39	-0.5
2,329,018	+		Echvi_1977	0.39	-0.8
2,329,019	-		Echvi_1977	0.39	+0.2
2,329,019	-		Echvi_1977	0.39	+1.8
2,329,125	+		Echvi_1977	0.45	-2.0
2,329,212	-		Echvi_1977	0.49	+0.1
2,329,261	-		Echvi_1977	0.52	+0.3
2,329,306	-		Echvi_1977	0.54	+1.2
2,329,306	-		Echvi_1977	0.54	-0.2
2,329,334	+		Echvi_1977	0.55	-0.0
2,329,334	+		Echvi_1977	0.55	-0.2
2,329,337	+		Echvi_1977	0.55	+0.3
2,329,364	+		Echvi_1977	0.57	+2.9
2,329,364	+		Echvi_1977	0.57	+0.6
2,329,365	-		Echvi_1977	0.57	+1.1
2,329,365	-		Echvi_1977	0.57	+0.7
2,329,365	-		Echvi_1977	0.57	-0.3
2,329,435	+		Echvi_1977	0.60	+1.3
2,329,435	+		Echvi_1977	0.60	+0.9
2,329,435	+		Echvi_1977	0.60	+0.2
2,329,435	+		Echvi_1977	0.60	-1.6
2,329,454	+		Echvi_1977	0.61	-2.4
2,329,455	-		Echvi_1977	0.61	+0.5
2,329,496	+		Echvi_1977	0.63	+0.8
2,329,582	+		Echvi_1977	0.68	-0.3
2,329,643	+		Echvi_1977	0.71	+1.9
2,329,644	-		Echvi_1977	0.71	-0.6
2,329,644	-		Echvi_1977	0.71	-0.8
2,329,677	-		Echvi_1977	0.73	-1.7
2,329,679	-		Echvi_1977	0.73	+0.0
2,329,798	-		Echvi_1977	0.79	+1.0
2,329,821	+		Echvi_1977	0.80	-0.6
2,329,821	+		Echvi_1977	0.80	+1.6
2,329,849	+		Echvi_1977	0.81	-0.5
2,329,849	+		Echvi_1977	0.81	+0.3
2,329,886	-		Echvi_1977	0.83	+2.1
2,329,890	+		Echvi_1977	0.83	+1.2
2,329,890	+		Echvi_1977	0.83	+0.4
2,329,890	+		Echvi_1977	0.83	-0.0
2,329,890	+		Echvi_1977	0.83	+0.3
2,329,890	+		Echvi_1977	0.83	-0.0
2,329,891	-		Echvi_1977	0.83	+2.2
2,329,891	-		Echvi_1977	0.83	+0.1
2,329,891	-		Echvi_1977	0.83	+0.3
2,329,891	-		Echvi_1977	0.83	+0.3
2,329,891	-		Echvi_1977	0.83	-1.5
2,329,910	-		Echvi_1977	0.84	+1.3
2,330,031	-				+1.5
2,330,031	-				-1.4
2,330,031	-				-0.6
2,330,033	+				+0.9
2,330,033	+				+2.4
2,330,034	-				-0.4
2,330,034	-				-0.8
2,330,034	-				-0.4
2,330,034	-				+0.2
2,330,037	-				-0.6
2,330,037	-				-1.0
2,330,064	-				-0.4
2,330,079	+				+0.1
2,330,128	+				+0.7
2,330,128	+				-1.1
2,330,128	+				-1.0
2,330,129	-				+0.4
2,330,129	-				-0.9
2,330,129	-				+0.7
2,330,129	-				-1.0
2,330,131	+				+1.9
2,330,132	-				-0.4
2,330,132	-				+3.2
2,330,135	-				-0.3
2,330,148	+				+0.7
2,330,149	-				+0.4
2,330,149	-				+1.2
2,330,149	-				-0.1
2,330,149	-				+0.5
2,330,175	-				-1.1
2,330,205	-				-0.5
2,330,376	-		Echvi_1978	0.13	-1.0
2,330,459	+		Echvi_1978	0.19	-0.1
2,330,482	+		Echvi_1978	0.21	+1.3
2,330,484	+		Echvi_1978	0.22	+0.3
2,330,484	+		Echvi_1978	0.22	+1.7
2,330,484	+		Echvi_1978	0.22	-1.9
2,330,485	-		Echvi_1978	0.22	-1.3
2,330,485	-		Echvi_1978	0.22	+2.0
2,330,541	+		Echvi_1978	0.26	+0.4
2,330,585	+		Echvi_1978	0.30	-1.3
2,330,585	+		Echvi_1978	0.30	-0.3
2,330,586	-		Echvi_1978	0.30	+1.9
2,330,634	+		Echvi_1978	0.34	-0.6
2,330,663	-		Echvi_1978	0.37	-0.6
2,330,663	-		Echvi_1978	0.37	+0.2
2,330,666	+		Echvi_1978	0.37	+1.9
2,330,667	-		Echvi_1978	0.37	+0.9
2,330,843	+		Echvi_1978	0.52	-0.8
2,330,843	+		Echvi_1978	0.52	+1.0
2,330,843	+		Echvi_1978	0.52	+0.4
2,330,845	+		Echvi_1978	0.52	-0.3
2,330,929	-		Echvi_1978	0.59	+0.7
2,330,977	+		Echvi_1978	0.63	-0.5
2,331,069	-		Echvi_1978	0.70	-1.9
2,331,084	-		Echvi_1978	0.72	+1.2
2,331,114	+		Echvi_1978	0.74	-0.2
2,331,121	+		Echvi_1978	0.75	+1.3
2,331,141	+		Echvi_1978	0.76	+0.7
2,331,141	+		Echvi_1978	0.76	+1.2
2,331,141	+		Echvi_1978	0.76	+0.4
2,331,142	-		Echvi_1978	0.77	-0.5
2,331,143	+		Echvi_1978	0.77	+0.5
2,331,144	-		Echvi_1978	0.77	-0.0
2,331,155	-		Echvi_1978	0.78	-1.8
2,331,155	-		Echvi_1978	0.78	+0.1
2,331,221	+		Echvi_1978	0.83	-0.4
2,331,221	+		Echvi_1978	0.83	+0.1
2,331,222	-		Echvi_1978	0.83	-2.6