Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28370 and PS417_28375 overlap by 4 nucleotides PS417_28375 and PS417_28380 overlap by 4 nucleotides PS417_28380 and PS417_28385 are separated by 12 nucleotides
PS417_28370: PS417_28370 - cadmium ABC transporter ATPase, at 6,122,758 to 6,124,644
_28370
PS417_28375: PS417_28375 - membrane protein, at 6,124,641 to 6,125,675
_28375
PS417_28380: PS417_28380 - protease, at 6,125,672 to 6,126,658
_28380
PS417_28385: PS417_28385 - membrane protein, at 6,126,671 to 6,128,575
_28385
Position (kb)
6124
6125
6126 Strain fitness (log2 ratio)
-1
0
1
2 at 6123.897 kb on + strand, within PS417_28370 at 6123.897 kb on + strand, within PS417_28370 at 6123.897 kb on + strand at 6123.897 kb on + strand, within PS417_28370 at 6123.898 kb on - strand, within PS417_28370 at 6123.898 kb on - strand, within PS417_28370 at 6123.899 kb on + strand, within PS417_28370 at 6123.899 kb on + strand, within PS417_28370 at 6123.899 kb on + strand, within PS417_28370 at 6123.899 kb on + strand, within PS417_28370 at 6123.899 kb on + strand, within PS417_28370 at 6123.900 kb on - strand, within PS417_28370 at 6123.900 kb on - strand, within PS417_28370 at 6124.318 kb on + strand, within PS417_28370 at 6124.448 kb on + strand, within PS417_28370 at 6125.051 kb on + strand, within PS417_28375 at 6125.154 kb on - strand, within PS417_28375 at 6125.156 kb on + strand, within PS417_28375 at 6125.157 kb on - strand, within PS417_28375 at 6125.270 kb on - strand, within PS417_28375 at 6125.270 kb on - strand, within PS417_28375 at 6125.596 kb on - strand at 6125.608 kb on + strand at 6125.796 kb on + strand, within PS417_28380 at 6125.796 kb on + strand, within PS417_28380 at 6125.796 kb on + strand, within PS417_28380 at 6125.797 kb on - strand, within PS417_28380 at 6125.797 kb on - strand, within PS417_28380 at 6125.817 kb on + strand, within PS417_28380 at 6125.829 kb on + strand, within PS417_28380 at 6126.075 kb on + strand, within PS417_28380 at 6126.075 kb on + strand, within PS417_28380 at 6126.076 kb on - strand, within PS417_28380 at 6126.079 kb on + strand, within PS417_28380 at 6126.079 kb on + strand, within PS417_28380 at 6126.080 kb on - strand, within PS417_28380 at 6126.080 kb on - strand, within PS417_28380 at 6126.080 kb on - strand, within PS417_28380 at 6126.312 kb on + strand, within PS417_28380 at 6126.313 kb on - strand, within PS417_28380 at 6126.313 kb on - strand, within PS417_28380 at 6126.563 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 6,123,897 + PS417_28370 0.60 +0.1 6,123,897 + PS417_28370 0.60 +0.7 6,123,897 + +1.7 6,123,897 + PS417_28370 0.60 +0.9 6,123,898 - PS417_28370 0.60 -0.2 6,123,898 - PS417_28370 0.60 -0.8 6,123,899 + PS417_28370 0.60 -0.1 6,123,899 + PS417_28370 0.60 -0.2 6,123,899 + PS417_28370 0.60 -0.2 6,123,899 + PS417_28370 0.60 -0.0 6,123,899 + PS417_28370 0.60 -0.2 6,123,900 - PS417_28370 0.61 +0.5 6,123,900 - PS417_28370 0.61 +0.1 6,124,318 + PS417_28370 0.83 -0.5 6,124,448 + PS417_28370 0.90 -0.3 6,125,051 + PS417_28375 0.40 +0.1 6,125,154 - PS417_28375 0.50 +0.5 6,125,156 + PS417_28375 0.50 -0.3 6,125,157 - PS417_28375 0.50 +0.3 6,125,270 - PS417_28375 0.61 +0.9 6,125,270 - PS417_28375 0.61 -0.5 6,125,596 - -0.2 6,125,608 + -0.1 6,125,796 + PS417_28380 0.13 +0.1 6,125,796 + PS417_28380 0.13 -0.1 6,125,796 + PS417_28380 0.13 +0.9 6,125,797 - PS417_28380 0.13 +0.5 6,125,797 - PS417_28380 0.13 -0.5 6,125,817 + PS417_28380 0.15 +0.6 6,125,829 + PS417_28380 0.16 -0.5 6,126,075 + PS417_28380 0.41 -0.3 6,126,075 + PS417_28380 0.41 -0.1 6,126,076 - PS417_28380 0.41 -0.4 6,126,079 + PS417_28380 0.41 +0.7 6,126,079 + PS417_28380 0.41 +1.3 6,126,080 - PS417_28380 0.41 +0.2 6,126,080 - PS417_28380 0.41 +0.7 6,126,080 - PS417_28380 0.41 -0.5 6,126,312 + PS417_28380 0.65 -0.5 6,126,313 - PS417_28380 0.65 -0.3 6,126,313 - PS417_28380 0.65 -0.0 6,126,563 - +1.8
Or see this region's nucleotide sequence