Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02650 and PS417_02655 are separated by 374 nucleotides PS417_02655 and PS417_02660 are separated by 231 nucleotides
PS417_02650: PS417_02650 - FAD-dependent oxidoreductase, at 606,246 to 607,529
_02650
PS417_02655: PS417_02655 - amino acid ABC transporter substrate-binding protein, at 607,904 to 609,040
_02655
PS417_02660: PS417_02660 - branched-chain amino acid transporter permease subunit LivH, at 609,272 to 610,186
_02660
Position (kb) 607
608
609
610 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 606.958 kb on - strand, within PS417_02650 at 607.009 kb on - strand, within PS417_02650 at 607.009 kb on - strand, within PS417_02650 at 607.011 kb on + strand, within PS417_02650 at 607.012 kb on - strand, within PS417_02650 at 607.212 kb on + strand, within PS417_02650 at 607.212 kb on + strand, within PS417_02650 at 607.213 kb on - strand, within PS417_02650 at 607.245 kb on + strand, within PS417_02650 at 607.386 kb on + strand, within PS417_02650 at 607.386 kb on + strand at 607.390 kb on + strand, within PS417_02650 at 607.390 kb on + strand, within PS417_02650 at 607.391 kb on - strand, within PS417_02650 at 607.391 kb on - strand, within PS417_02650 at 607.391 kb on - strand, within PS417_02650 at 607.463 kb on + strand at 607.464 kb on - strand at 607.473 kb on + strand at 607.495 kb on - strand at 607.666 kb on + strand at 607.667 kb on - strand at 607.728 kb on + strand at 607.735 kb on + strand at 607.779 kb on + strand at 607.919 kb on + strand at 608.045 kb on + strand, within PS417_02655 at 608.045 kb on + strand, within PS417_02655 at 608.046 kb on - strand, within PS417_02655 at 608.046 kb on - strand, within PS417_02655 at 608.249 kb on + strand, within PS417_02655 at 608.249 kb on + strand, within PS417_02655 at 608.249 kb on + strand, within PS417_02655 at 608.250 kb on - strand, within PS417_02655 at 608.332 kb on + strand at 608.332 kb on + strand, within PS417_02655 at 608.333 kb on - strand, within PS417_02655 at 608.375 kb on + strand, within PS417_02655 at 608.433 kb on - strand, within PS417_02655 at 608.576 kb on + strand, within PS417_02655 at 608.577 kb on - strand, within PS417_02655 at 608.577 kb on - strand, within PS417_02655 at 608.670 kb on + strand, within PS417_02655 at 608.671 kb on - strand, within PS417_02655 at 608.726 kb on + strand, within PS417_02655 at 608.726 kb on + strand, within PS417_02655 at 608.727 kb on - strand, within PS417_02655 at 608.727 kb on - strand, within PS417_02655 at 608.817 kb on - strand, within PS417_02655 at 608.826 kb on - strand, within PS417_02655 at 608.826 kb on - strand, within PS417_02655 at 608.826 kb on - strand, within PS417_02655 at 608.982 kb on - strand at 608.990 kb on + strand at 608.991 kb on - strand at 609.015 kb on - strand at 609.038 kb on + strand at 609.039 kb on - strand at 609.039 kb on - strand at 609.044 kb on + strand at 609.127 kb on - strand at 609.139 kb on - strand at 609.139 kb on - strand at 609.139 kb on - strand at 609.202 kb on + strand at 609.280 kb on + strand at 609.281 kb on - strand at 609.281 kb on - strand at 609.360 kb on - strand at 609.401 kb on + strand, within PS417_02660 at 609.401 kb on + strand, within PS417_02660 at 609.402 kb on - strand, within PS417_02660 at 609.402 kb on - strand, within PS417_02660 at 609.403 kb on + strand, within PS417_02660 at 609.403 kb on + strand at 609.404 kb on - strand, within PS417_02660 at 609.404 kb on - strand, within PS417_02660 at 609.450 kb on - strand, within PS417_02660 at 609.450 kb on - strand, within PS417_02660 at 609.658 kb on + strand, within PS417_02660 at 609.659 kb on - strand, within PS417_02660 at 609.722 kb on + strand, within PS417_02660 at 609.723 kb on - strand, within PS417_02660 at 609.723 kb on - strand, within PS417_02660 at 609.724 kb on + strand, within PS417_02660 at 609.724 kb on + strand, within PS417_02660 at 609.776 kb on + strand, within PS417_02660 at 609.776 kb on + strand, within PS417_02660 at 609.776 kb on + strand, within PS417_02660 at 609.776 kb on + strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.777 kb on - strand, within PS417_02660 at 609.788 kb on + strand, within PS417_02660 at 609.879 kb on - strand, within PS417_02660 at 609.879 kb on - strand, within PS417_02660 at 609.879 kb on - strand, within PS417_02660 at 609.938 kb on + strand, within PS417_02660
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 606,958 - PS417_02650 0.55 +0.1 607,009 - PS417_02650 0.59 -0.6 607,009 - PS417_02650 0.59 -0.3 607,011 + PS417_02650 0.60 +0.4 607,012 - PS417_02650 0.60 -0.9 607,212 + PS417_02650 0.75 +0.2 607,212 + PS417_02650 0.75 +1.0 607,213 - PS417_02650 0.75 +0.2 607,245 + PS417_02650 0.78 +0.5 607,386 + PS417_02650 0.89 +1.4 607,386 + +0.4 607,390 + PS417_02650 0.89 +1.1 607,390 + PS417_02650 0.89 +0.4 607,391 - PS417_02650 0.89 -0.4 607,391 - PS417_02650 0.89 +0.1 607,391 - PS417_02650 0.89 -0.3 607,463 + +1.8 607,464 - -2.1 607,473 + +1.0 607,495 - -1.4 607,666 + +1.2 607,667 - +0.2 607,728 + +1.0 607,735 + +1.3 607,779 + +1.4 607,919 + -0.1 608,045 + PS417_02655 0.12 -0.5 608,045 + PS417_02655 0.12 -1.5 608,046 - PS417_02655 0.12 -0.4 608,046 - PS417_02655 0.12 -1.3 608,249 + PS417_02655 0.30 +0.9 608,249 + PS417_02655 0.30 -0.7 608,249 + PS417_02655 0.30 -1.1 608,250 - PS417_02655 0.30 -0.5 608,332 + +0.4 608,332 + PS417_02655 0.38 -0.8 608,333 - PS417_02655 0.38 -1.0 608,375 + PS417_02655 0.41 -0.8 608,433 - PS417_02655 0.47 -0.7 608,576 + PS417_02655 0.59 -0.8 608,577 - PS417_02655 0.59 -0.5 608,577 - PS417_02655 0.59 -1.0 608,670 + PS417_02655 0.67 -0.3 608,671 - PS417_02655 0.67 -1.3 608,726 + PS417_02655 0.72 -1.2 608,726 + PS417_02655 0.72 -1.0 608,727 - PS417_02655 0.72 -1.4 608,727 - PS417_02655 0.72 -1.7 608,817 - PS417_02655 0.80 -1.2 608,826 - PS417_02655 0.81 -0.7 608,826 - PS417_02655 0.81 -1.1 608,826 - PS417_02655 0.81 -1.1 608,982 - -0.8 608,990 + -1.3 608,991 - -1.1 609,015 - -0.6 609,038 + -0.2 609,039 - -0.4 609,039 - -0.4 609,044 + -0.1 609,127 - -1.4 609,139 - +0.0 609,139 - -0.3 609,139 - -0.6 609,202 + +0.8 609,280 + -0.6 609,281 - -1.2 609,281 - -1.2 609,360 - -0.7 609,401 + PS417_02660 0.14 -0.4 609,401 + PS417_02660 0.14 -1.4 609,402 - PS417_02660 0.14 -0.7 609,402 - PS417_02660 0.14 -1.1 609,403 + PS417_02660 0.14 -1.3 609,403 + -0.6 609,404 - PS417_02660 0.14 -1.2 609,404 - PS417_02660 0.14 -0.3 609,450 - PS417_02660 0.19 -0.9 609,450 - PS417_02660 0.19 -1.3 609,658 + PS417_02660 0.42 -1.0 609,659 - PS417_02660 0.42 -1.5 609,722 + PS417_02660 0.49 -0.8 609,723 - PS417_02660 0.49 -0.3 609,723 - PS417_02660 0.49 -1.0 609,724 + PS417_02660 0.49 +2.8 609,724 + PS417_02660 0.49 -1.1 609,776 + PS417_02660 0.55 -0.8 609,776 + PS417_02660 0.55 +0.3 609,776 + PS417_02660 0.55 -1.1 609,776 + PS417_02660 0.55 -0.7 609,777 - PS417_02660 0.55 -1.1 609,777 - PS417_02660 0.55 -1.5 609,777 - PS417_02660 0.55 -1.9 609,777 - PS417_02660 0.55 +0.0 609,777 - PS417_02660 0.55 -0.6 609,777 - PS417_02660 0.55 -0.5 609,777 - PS417_02660 0.55 -0.6 609,788 + PS417_02660 0.56 -0.9 609,879 - PS417_02660 0.66 -1.1 609,879 - PS417_02660 0.66 -0.2 609,879 - PS417_02660 0.66 -1.1 609,938 + PS417_02660 0.73 -0.5
Or see this region's nucleotide sequence