Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2858

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
3,427,498	-		Echvi_2857	0.21	+1.0
3,427,528	+		Echvi_2857	0.23	+0.0
3,427,565	+		Echvi_2857	0.26	-0.9
3,427,566	-		Echvi_2857	0.26	-0.2
3,427,596	+		Echvi_2857	0.29	-0.7
3,427,597	-		Echvi_2857	0.29	+0.4
3,427,597	-		Echvi_2857	0.29	+1.0
3,427,599	+		Echvi_2857	0.29	-0.6
3,427,599	+		Echvi_2857	0.29	-3.0
3,427,599	+		Echvi_2857	0.29	-1.6
3,427,600	-		Echvi_2857	0.29	-1.0
3,427,600	-		Echvi_2857	0.29	+1.0
3,427,604	+		Echvi_2857	0.30	-0.7
3,427,604	+		Echvi_2857	0.30	-2.0
3,427,605	-		Echvi_2857	0.30	+0.8
3,427,641	+		Echvi_2857	0.33	+0.8
3,427,642	-		Echvi_2857	0.33	-0.1
3,427,642	-		Echvi_2857	0.33	-2.6
3,427,646	+		Echvi_2857	0.33	+2.0
3,427,646	+		Echvi_2857	0.33	+0.8
3,427,647	-		Echvi_2857	0.33	-1.7
3,427,647	-		Echvi_2857	0.33	-0.2
3,427,690	+		Echvi_2857	0.37	+2.4
3,427,690	+		Echvi_2857	0.37	+2.0
3,427,690	+		Echvi_2857	0.37	-0.4
3,427,691	-		Echvi_2857	0.37	-0.5
3,427,691	-		Echvi_2857	0.37	+0.8
3,427,691	-		Echvi_2857	0.37	+0.2
3,427,691	-		Echvi_2857	0.37	+0.7
3,427,701	+		Echvi_2857	0.38	-0.7
3,427,701	+		Echvi_2857	0.38	-0.5
3,427,702	-		Echvi_2857	0.38	+1.4
3,427,702	-		Echvi_2857	0.38	+0.2
3,427,728	+		Echvi_2857	0.40	-1.0
3,427,803	+		Echvi_2857	0.46	-0.5
3,427,817	-		Echvi_2857	0.48	-1.0
3,427,868	+		Echvi_2857	0.52	+1.0
3,427,924	+		Echvi_2857	0.57	+1.9
3,427,936	-		Echvi_2857	0.58	+0.0
3,427,953	+		Echvi_2857	0.59	-1.0
3,427,956	+		Echvi_2857	0.59	+0.3
3,427,957	-		Echvi_2857	0.60	+1.1
3,428,014	-		Echvi_2857	0.64	+1.5
3,428,050	-		Echvi_2857	0.67	-2.1
3,428,070	+		Echvi_2857	0.69	+0.9
3,428,093	+		Echvi_2857	0.71	+0.1
3,428,119	-		Echvi_2857	0.73	+0.8
3,428,127	-		Echvi_2857	0.74	+0.8
3,428,187	+		Echvi_2857	0.79	+2.4
3,428,211	+		Echvi_2857	0.81	-0.1
3,428,226	+		Echvi_2857	0.82	-0.8
3,428,227	-		Echvi_2857	0.82	-0.4
3,428,233	+		Echvi_2857	0.83	+4.0
3,428,324	+				+0.2
3,428,339	-				-3.1
3,428,370	-				-0.9
3,428,370	-				+0.7
3,428,373	+				-0.7
3,428,431	+				+0.5
3,428,432	-				-0.5
3,428,434	+				-2.1
3,428,436	+				+0.8
3,428,436	+				+0.6
3,428,436	+				-1.9
3,428,436	+				+0.1
3,428,437	-				+1.1
3,428,437	-				-0.1
3,428,437	-				-0.8
3,428,437	-				+0.1
3,428,458	+				+1.2
3,428,459	-				-0.2
3,428,463	+				-0.8
3,428,464	-				-0.7
3,428,464	-				+1.3
3,428,464	-				-0.0
3,428,472	+				+0.7
3,428,472	+				-0.4
3,428,472	+				-1.4
3,428,472	+				+0.1
3,428,473	-				-0.7
3,428,473	-				+4.8
3,428,473	-				+1.9
3,428,473	-				-1.0
3,428,473	-				-0.6
3,428,474	+				+0.3
3,428,474	+				+0.8
3,428,474	+				-0.2
3,428,474	+				+0.3
3,428,474	+				-0.8
3,428,474	+				-1.4
3,428,474	+				+2.0
3,428,474	+				-1.3
3,428,474	+				-1.4
3,428,474	+				-1.6
3,428,474	+				-0.1
3,428,474	+				-0.2
3,428,474	+				+0.2
3,428,475	-				+0.8
3,428,475	-				-0.4
3,428,475	-				+1.4
3,428,475	-				+0.3
3,428,475	-				-2.6
3,428,475	-				-0.4
3,428,475	-				+0.6
3,428,475	-				-1.0
3,428,475	-				-0.3
3,428,475	-				-0.5
3,428,475	-				-0.4
3,428,475	-				+1.0
3,428,475	-				-0.6
3,428,478	+				+0.6
3,428,478	+				-0.0
3,428,479	-				+1.3
3,428,480	+				+0.5
3,428,535	+				-1.0
3,428,577	+				+0.0
3,428,602	-		Echvi_2858	0.12	-1.3
3,428,627	+		Echvi_2858	0.14	-1.8
3,428,681	+		Echvi_2858	0.19	+1.3
3,428,681	+		Echvi_2858	0.19	-1.6
3,428,682	-		Echvi_2858	0.19	-0.2
3,428,736	+		Echvi_2858	0.24	-0.3
3,428,815	+		Echvi_2858	0.31	-0.4
3,428,815	+		Echvi_2858	0.31	-1.1
3,428,816	-		Echvi_2858	0.31	+0.2
3,428,890	+		Echvi_2858	0.38	+0.5
3,428,891	-		Echvi_2858	0.38	-0.6
3,428,914	+		Echvi_2858	0.40	+1.3
3,428,915	-		Echvi_2858	0.40	+2.0
3,428,916	+		Echvi_2858	0.40	-0.5
3,428,916	+		Echvi_2858	0.40	-0.5
3,428,916	+		Echvi_2858	0.40	-0.3
3,428,916	+		Echvi_2858	0.40	-1.9
3,428,916	+		Echvi_2858	0.40	+0.0
3,428,917	-		Echvi_2858	0.40	+0.3
3,428,925	+		Echvi_2858	0.41	-0.7
3,429,020	+		Echvi_2858	0.50	+0.0
3,429,021	-		Echvi_2858	0.50	+0.4
3,429,039	+		Echvi_2858	0.51	+1.2
3,429,040	-		Echvi_2858	0.51	+2.2
3,429,040	-		Echvi_2858	0.51	-0.7
3,429,040	-		Echvi_2858	0.51	-0.1
3,429,048	+		Echvi_2858	0.52	-0.5
3,429,054	-		Echvi_2858	0.53	+0.1
3,429,141	-		Echvi_2858	0.60	-1.9
3,429,195	+		Echvi_2858	0.65	-1.1
3,429,254	+		Echvi_2858	0.71	+0.2
3,429,257	+		Echvi_2858	0.71	-2.6
3,429,258	-		Echvi_2858	0.71	-0.4
3,429,310	-		Echvi_2858	0.76	+0.5
3,429,310	-		Echvi_2858	0.76	+0.8
3,429,345	+		Echvi_2858	0.79	+0.6
3,429,463	+		Echvi_2858	0.89	-1.8
3,429,543	+				-0.8
3,429,544	-				-1.5
3,429,551	-				-2.7
3,429,592	-				+0.4
3,429,592	-				-1.1
3,429,607	-				+0.5
3,429,640	+				-1.3
3,429,741	+		Echvi_2859	0.11	-0.8
3,429,742	-		Echvi_2859	0.12	-2.2
3,429,750	-		Echvi_2859	0.13	+0.6
3,429,773	-		Echvi_2859	0.16	-1.7
3,429,821	+		Echvi_2859	0.23	+0.5
3,429,821	+		Echvi_2859	0.23	+0.8
3,429,825	-		Echvi_2859	0.24	+1.1
3,429,901	+		Echvi_2859	0.35	-2.0
3,429,902	-		Echvi_2859	0.36	+0.3
3,429,902	-		Echvi_2859	0.36	-0.4
3,429,902	-		Echvi_2859	0.36	+0.8
3,429,902	-		Echvi_2859	0.36	+0.4
3,429,910	+		Echvi_2859	0.37	+0.0
3,429,911	-		Echvi_2859	0.37	+0.5
3,429,917	+		Echvi_2859	0.38	-0.0
3,429,917	+		Echvi_2859	0.38	+1.3
3,429,921	-		Echvi_2859	0.38	-2.3
3,429,958	+		Echvi_2859	0.44	+1.3
3,430,011	+		Echvi_2859	0.52	-1.0
3,430,052	+		Echvi_2859	0.58	-0.3
3,430,116	+		Echvi_2859	0.68	+2.3
3,430,117	-		Echvi_2859	0.68	-1.5
3,430,181	-		Echvi_2859	0.77	+0.3
3,430,393	+				+2.6
3,430,410	+				+1.7
3,430,436	+				+0.0