Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1639

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
1,893,863	-		Echvi_1636	0.87	-1.6
1,893,973	+				+0.7
1,893,974	-				-0.3
1,893,974	-				+0.5
1,893,994	+				+1.9
1,894,009	+				+0.1
1,894,107	-				-1.0
1,894,109	+				+2.1
1,894,204	-				-0.8
1,894,246	-		Echvi_1637	0.19	+0.2
1,894,319	-		Echvi_1637	0.37	+0.2
1,894,362	-		Echvi_1637	0.48	+3.2
1,894,418	+		Echvi_1637	0.62	-0.8
1,894,418	+		Echvi_1637	0.62	+0.7
1,894,419	-		Echvi_1637	0.62	+1.5
1,894,419	-		Echvi_1637	0.62	-2.0
1,894,419	-		Echvi_1637	0.62	-0.3
1,894,419	-		Echvi_1637	0.62	-1.8
1,894,419	-		Echvi_1637	0.62	-3.0
1,894,419	-		Echvi_1637	0.62	+0.4
1,894,447	+		Echvi_1637	0.69	+0.3
1,894,447	+		Echvi_1637	0.69	+0.3
1,894,494	+		Echvi_1637	0.81	-2.1
1,894,570	+				+2.2
1,894,570	+				+0.6
1,894,571	-				+0.2
1,894,571	-				-3.0
1,894,624	-		Echvi_1638	0.18	+2.2
1,894,642	-		Echvi_1638	0.31	-0.1
1,894,668	+		Echvi_1638	0.48	+0.5
1,894,858	+				-0.3
1,894,921	-				+1.0
1,894,998	+		Echvi_1639	0.11	+0.9
1,894,999	-		Echvi_1639	0.11	-0.2
1,894,999	-		Echvi_1639	0.11	-0.5
1,894,999	-		Echvi_1639	0.11	+0.5
1,894,999	-		Echvi_1639	0.11	+0.8
1,895,062	+		Echvi_1639	0.15	+0.8
1,895,108	-		Echvi_1639	0.19	+0.2
1,895,108	-		Echvi_1639	0.19	-0.6
1,895,109	+		Echvi_1639	0.19	+0.2
1,895,110	-		Echvi_1639	0.19	+0.0
1,895,165	-		Echvi_1639	0.23	-0.2
1,895,167	+		Echvi_1639	0.23	+0.6
1,895,167	+		Echvi_1639	0.23	+1.7
1,895,168	-		Echvi_1639	0.23	+1.4
1,895,168	-		Echvi_1639	0.23	-0.7
1,895,169	+		Echvi_1639	0.23	-1.6
1,895,169	+		Echvi_1639	0.23	+1.3
1,895,169	+		Echvi_1639	0.23	-0.6
1,895,170	-		Echvi_1639	0.23	+1.2
1,895,170	-		Echvi_1639	0.23	+1.3
1,895,189	-		Echvi_1639	0.25	+0.1
1,895,239	+		Echvi_1639	0.28	-2.0
1,895,283	-		Echvi_1639	0.31	+1.0
1,895,402	+		Echvi_1639	0.40	+0.5
1,895,405	+		Echvi_1639	0.40	-1.5
1,895,405	-		Echvi_1639	0.40	+0.6
1,895,440	+		Echvi_1639	0.43	-1.1
1,895,505	+		Echvi_1639	0.48	-0.0
1,895,533	+		Echvi_1639	0.50	+0.2
1,895,589	+		Echvi_1639	0.54	-1.8
1,895,589	+		Echvi_1639	0.54	-2.0
1,895,590	-		Echvi_1639	0.54	-1.8
1,895,590	-		Echvi_1639	0.54	-0.2
1,895,590	-		Echvi_1639	0.54	+0.1
1,895,689	+		Echvi_1639	0.61	-0.4
1,895,689	+		Echvi_1639	0.61	-1.2
1,895,690	-				+2.2
1,895,690	-		Echvi_1639	0.61	-0.6
1,895,757	+		Echvi_1639	0.66	-0.4
1,895,757	+		Echvi_1639	0.66	-0.6
1,895,764	+		Echvi_1639	0.67	-0.1
1,895,765	-		Echvi_1639	0.67	-1.5
1,895,765	-		Echvi_1639	0.67	+0.4
1,895,791	-		Echvi_1639	0.69	+0.4
1,895,791	-		Echvi_1639	0.69	+0.5
1,895,832	+		Echvi_1639	0.72	+0.0
1,895,833	-		Echvi_1639	0.72	+0.8
1,895,833	-		Echvi_1639	0.72	+1.2
1,895,833	-		Echvi_1639	0.72	+0.9
1,895,833	-		Echvi_1639	0.72	+0.0
1,895,834	+		Echvi_1639	0.72	-0.6
1,895,834	+		Echvi_1639	0.72	+0.1
1,895,835	-		Echvi_1639	0.72	+0.5
1,895,837	-		Echvi_1639	0.72	-1.8
1,895,837	-		Echvi_1639	0.72	+0.7
1,895,837	-		Echvi_1639	0.72	+1.2
1,895,837	-		Echvi_1639	0.72	+1.4
1,895,837	-		Echvi_1639	0.72	-0.0
1,895,867	-		Echvi_1639	0.74	-0.8
1,895,883	+		Echvi_1639	0.75	+1.1
1,895,883	+		Echvi_1639	0.75	-0.4
1,895,883	+		Echvi_1639	0.75	-0.5
1,895,883	+		Echvi_1639	0.75	+0.9
1,895,883	+		Echvi_1639	0.75	-0.4
1,895,884	-		Echvi_1639	0.75	-0.3
1,895,884	-		Echvi_1639	0.75	+0.3
1,895,886	-		Echvi_1639	0.76	+1.1
1,895,915	+		Echvi_1639	0.78	-2.6
1,895,915	+		Echvi_1639	0.78	+0.3
1,895,916	-		Echvi_1639	0.78	+1.3
1,895,916	-		Echvi_1639	0.78	+0.1
1,895,923	+		Echvi_1639	0.78	+0.2
1,895,923	+		Echvi_1639	0.78	-0.5
1,895,933	-		Echvi_1639	0.79	+1.5
1,895,974	-		Echvi_1639	0.82	-0.8
1,895,997	-		Echvi_1639	0.84	+1.6
1,896,023	+		Echvi_1639	0.86	+0.6
1,896,023	+		Echvi_1639	0.86	+0.5
1,896,024	-		Echvi_1639	0.86	+1.8
1,896,228	+				+0.2
1,896,229	-				-1.0
1,896,272	+				-0.6
1,896,294	+				+0.6
1,896,294	+				+0.3
1,896,294	+				+1.4
1,896,294	+				-1.4
1,896,295	-				+0.5
1,896,295	-				+0.1
1,896,299	-				-0.1
1,896,299	-				+0.7
1,896,305	-				+0.8
1,896,344	-		Echvi_1640	0.13	+0.7
1,896,344	-		Echvi_1640	0.13	-0.1
1,896,344	-		Echvi_1640	0.13	+0.3
1,896,354	+		Echvi_1640	0.14	-0.4
1,896,388	-		Echvi_1640	0.18	+0.3
1,896,490	-		Echvi_1640	0.30	-0.6
1,896,510	-		Echvi_1640	0.32	-1.1
1,896,567	-		Echvi_1640	0.38	-1.3
1,896,581	-		Echvi_1640	0.40	-3.3
1,896,606	-		Echvi_1640	0.43	+1.7
1,896,625	+		Echvi_1640	0.45	+0.5
1,896,697	-		Echvi_1640	0.53	-0.2
1,896,775	+		Echvi_1640	0.62	+0.4
1,896,775	+		Echvi_1640	0.62	+0.2
1,896,778	-		Echvi_1640	0.62	+1.2
1,896,778	-		Echvi_1640	0.62	-1.5
1,896,891	+		Echvi_1640	0.75	-1.0
1,896,891	+		Echvi_1640	0.75	-0.4
1,896,891	+		Echvi_1640	0.75	+0.2
1,896,891	+		Echvi_1640	0.75	+1.9
1,896,891	+		Echvi_1640	0.75	-0.4
1,896,892	-		Echvi_1640	0.75	+1.6
1,896,892	-		Echvi_1640	0.75	+1.0
1,896,892	-		Echvi_1640	0.75	+0.2
1,896,892	-		Echvi_1640	0.75	+0.9
1,896,892	-		Echvi_1640	0.75	-1.1
1,896,941	-		Echvi_1640	0.80	-1.0
1,896,941	-		Echvi_1640	0.80	-1.1
1,896,998	+		Echvi_1640	0.87	-0.8
1,896,998	+		Echvi_1640	0.87	-0.3
1,897,065	+				+0.2
1,897,065	+				-0.5
1,897,065	+				-0.7
1,897,066	-				+0.9
1,897,066	-				-0.1
1,897,066	-				+0.2
1,897,067	+				-1.7
1,897,129	+				+0.5
1,897,151	+				-0.8
1,897,162	+				+2.0
1,897,162	+				-0.1
1,897,163	-				-1.4
1,897,172	+				+1.0
1,897,173	-				-0.9
1,897,173	-				-0.8
1,897,177	+				-2.0
1,897,197	+				+0.7
1,897,197	+				+0.8