Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16420

Experiment: m.b. Lomefloxacin 0.004 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.004 mM
3,817,609	+		CA264_16410	0.60	-0.6
3,817,609	+		CA264_16410	0.60	+0.1
3,817,609	+		CA264_16410	0.60	-0.4
3,817,609	+		CA264_16410	0.60	+0.9
3,817,610	-		CA264_16410	0.60	-0.4
3,817,610	-		CA264_16410	0.60	-0.7
3,817,610	-		CA264_16410	0.60	-0.2
3,817,612	+		CA264_16410	0.60	-0.4
3,817,612	+		CA264_16410	0.60	-0.7
3,817,615	+		CA264_16410	0.60	-0.1
3,817,616	-		CA264_16410	0.60	-0.1
3,817,630	+		CA264_16410	0.62	-0.7
3,817,630	+		CA264_16410	0.62	-0.3
3,817,661	-		CA264_16410	0.65	-0.2
3,817,661	-		CA264_16410	0.65	-0.2
3,817,687	+		CA264_16410	0.68	-1.1
3,817,708	+		CA264_16410	0.71	-1.4
3,817,739	-		CA264_16410	0.74	-0.6
3,817,739	-		CA264_16410	0.74	-1.0
3,817,739	-		CA264_16410	0.74	-0.4
3,817,907	+				-0.3
3,817,948	-				-0.2
3,817,958	+				-0.6
3,817,959	-				-1.2
3,818,045	-				-0.4
3,818,045	-				-0.1
3,818,059	+				-1.2
3,818,060	-				-0.9
3,818,063	+				-0.8
3,818,063	+				-0.9
3,818,064	-				-0.4
3,818,064	-				+0.0
3,818,091	+				-0.1
3,818,091	+				+0.3
3,818,094	-				-0.3
3,818,094	-				-0.8
3,818,098	-				-0.2
3,818,113	-				-0.4
3,818,125	-				-0.7
3,818,178	-				+0.0
3,818,193	-				-0.7
3,818,195	-				-2.3
3,818,299	-		CA264_16415	0.11	-0.4
3,818,535	+				-0.4
3,818,731	+				-0.6
3,818,731	+				+0.0
3,818,753	+		CA264_16420	0.11	-0.4
3,819,077	-		CA264_16420	0.29	-0.6
3,819,132	-		CA264_16420	0.32	-0.0
3,819,132	-		CA264_16420	0.32	+0.9
3,819,132	-		CA264_16420	0.32	-0.5
3,819,133	+		CA264_16420	0.32	+0.7
3,819,133	+		CA264_16420	0.32	-0.1
3,819,134	-		CA264_16420	0.32	-1.1
3,819,134	-		CA264_16420	0.32	-0.9
3,819,191	-		CA264_16420	0.35	-0.2
3,819,198	+		CA264_16420	0.35	-0.8
3,819,198	+		CA264_16420	0.35	-0.8
3,819,199	-		CA264_16420	0.35	-0.7
3,819,199	-		CA264_16420	0.35	-0.2
3,819,199	-		CA264_16420	0.35	-0.2
3,819,206	-		CA264_16420	0.36	-0.6
3,819,209	-		CA264_16420	0.36	+0.2
3,819,209	-		CA264_16420	0.36	+0.2
3,819,256	-		CA264_16420	0.39	+0.2
3,819,284	-		CA264_16420	0.40	-0.9
3,819,382	+		CA264_16420	0.45	-1.0
3,819,382	+		CA264_16420	0.45	-1.0
3,819,382	+		CA264_16420	0.45	-0.7
3,819,382	+		CA264_16420	0.45	-0.4
3,819,383	-		CA264_16420	0.45	-0.6
3,819,383	-		CA264_16420	0.45	-1.1
3,819,383	-		CA264_16420	0.45	-1.7
3,819,505	-		CA264_16420	0.52	-0.9
3,819,515	+		CA264_16420	0.53	-0.7
3,819,518	+		CA264_16420	0.53	-1.2
3,819,590	-		CA264_16420	0.57	-0.6
3,819,597	-		CA264_16420	0.57	-0.6
3,819,597	-		CA264_16420	0.57	-1.2
3,819,621	+		CA264_16420	0.59	+0.7
3,819,621	+		CA264_16420	0.59	-0.5
3,819,621	+		CA264_16420	0.59	+0.2
3,819,622	-		CA264_16420	0.59	-0.9
3,819,622	-		CA264_16420	0.59	-0.1
3,819,622	-		CA264_16420	0.59	-0.3
3,819,622	-				+1.8
3,819,686	+		CA264_16420	0.62	-1.2
3,819,686	+		CA264_16420	0.62	+0.3
3,819,687	-		CA264_16420	0.62	-0.9
3,819,688	+		CA264_16420	0.62	-0.6
3,819,688	+		CA264_16420	0.62	+0.2
3,819,689	-		CA264_16420	0.62	-0.3
3,819,689	-		CA264_16420	0.62	-1.8
3,819,790	+		CA264_16420	0.68	-0.3
3,819,790	+		CA264_16420	0.68	+0.2
3,819,790	+		CA264_16420	0.68	-0.4
3,819,794	+		CA264_16420	0.68	-0.8
3,819,794	+		CA264_16420	0.68	-0.6
3,819,794	+		CA264_16420	0.68	-1.6
3,819,801	+				-1.4
3,819,801	+		CA264_16420	0.68	-2.5
3,819,801	+		CA264_16420	0.68	-0.5
3,819,801	+		CA264_16420	0.68	+0.2
3,819,802	-		CA264_16420	0.69	-0.2
3,819,802	-		CA264_16420	0.69	-0.3
3,819,802	-		CA264_16420	0.69	-1.3
3,819,802	-		CA264_16420	0.69	-0.3
3,819,803	+		CA264_16420	0.69	-1.1
3,819,803	+		CA264_16420	0.69	-0.6
3,819,806	+		CA264_16420	0.69	-0.3
3,819,855	+		CA264_16420	0.71	-0.5
3,819,856	-		CA264_16420	0.72	-0.3
3,819,897	-		CA264_16420	0.74	-1.8
3,819,971	+		CA264_16420	0.78	-0.3
3,819,971	+		CA264_16420	0.78	-0.3
3,819,971	+		CA264_16420	0.78	-0.4
3,819,972	-		CA264_16420	0.78	+0.0
3,819,992	+		CA264_16420	0.79	-1.2
3,819,993	-		CA264_16420	0.79	-2.3
3,819,993	-		CA264_16420	0.79	-0.1
3,820,106	-		CA264_16420	0.85	+2.2
3,820,131	-		CA264_16420	0.87	-0.4
3,820,173	-		CA264_16420	0.89	-0.3
3,820,226	+				+0.5
3,820,268	+				-0.8
3,820,355	+				-1.5
3,820,355	+				-0.8
3,820,355	+				+0.1
3,820,356	-				-1.6
3,820,380	+				-0.4
3,820,381	-				-1.3
3,820,381	-				-1.2
3,820,385	+				-0.5
3,820,387	+				-2.3
3,820,388	-				-0.5
3,820,389	+				-0.6
3,820,389	+				-0.8
3,820,389	+				-1.2
3,820,389	+				-1.1
3,820,394	+				-1.3
3,820,394	+				-0.3
3,820,394	+				-1.0
3,820,524	+				-0.5
3,820,550	+				-0.4
3,820,553	-				-0.6
3,820,598	+				-0.5
3,820,599	-				-0.4
3,820,822	+		CA264_16425	0.75	-0.3
3,820,822	+		CA264_16425	0.75	+0.5
3,820,822	+		CA264_16425	0.75	-0.7
3,820,823	-		CA264_16425	0.76	-0.9
3,820,823	-		CA264_16425	0.76	-0.7
3,820,823	-		CA264_16425	0.76	-1.2
3,820,824	+		CA264_16425	0.76	-0.6
3,820,824	+		CA264_16425	0.76	-0.5
3,820,825	-		CA264_16425	0.76	-0.8
3,820,838	+		CA264_16425	0.80	-0.2
3,820,838	+		CA264_16425	0.80	-0.6
3,820,839	-		CA264_16425	0.81	-0.7
3,820,842	+		CA264_16425	0.81	-0.7
3,820,843	-		CA264_16425	0.82	-0.1
3,820,870	+				-1.1
3,820,872	+				+0.1
3,820,873	-				-0.5
3,820,873	-				-0.7
3,820,873	-				-0.2
3,820,973	+				-0.5
3,820,976	+				-0.7
3,820,977	-				-0.3
3,821,043	+				-0.9
3,821,044	-				-2.4
3,821,047	-				+1.3
3,821,049	-				-0.3
3,821,227	-				-0.7
3,821,227	-				-0.9
3,821,227	-				-0.5
3,821,270	+				-0.9
3,821,318	+				-0.4
3,821,318	+				+0.6
3,821,319	-				-0.2
3,821,319	-				-0.0
3,821,349	-		CA264_16430	0.11	-0.8
3,821,349	-		CA264_16430	0.11	+0.6
3,821,349	-		CA264_16430	0.11	-0.2