Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16275 and CA264_16280 are separated by 342 nucleotides CA264_16280 and CA264_16285 overlap by 20 nucleotides
CA264_16275: CA264_16275 - PA-phosphatase, at 3,787,072 to 3,787,965
_16275
CA264_16280: CA264_16280 - bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase, at 3,788,308 to 3,789,825
_16280
CA264_16285: CA264_16285 - hypothetical protein, at 3,789,806 to 3,790,705
_16285
Position (kb)
3788
3789
3790 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3787.347 kb on + strand, within CA264_16275 at 3787.348 kb on - strand, within CA264_16275 at 3787.350 kb on + strand, within CA264_16275 at 3787.351 kb on - strand, within CA264_16275 at 3787.351 kb on - strand, within CA264_16275 at 3787.351 kb on - strand, within CA264_16275 at 3787.358 kb on + strand, within CA264_16275 at 3787.358 kb on + strand, within CA264_16275 at 3787.359 kb on - strand, within CA264_16275 at 3787.416 kb on + strand, within CA264_16275 at 3787.425 kb on + strand, within CA264_16275 at 3787.425 kb on + strand, within CA264_16275 at 3787.426 kb on - strand, within CA264_16275 at 3787.435 kb on + strand, within CA264_16275 at 3787.436 kb on - strand, within CA264_16275 at 3787.436 kb on - strand, within CA264_16275 at 3787.436 kb on - strand, within CA264_16275 at 3787.559 kb on + strand, within CA264_16275 at 3787.572 kb on + strand, within CA264_16275 at 3787.652 kb on + strand, within CA264_16275 at 3787.653 kb on - strand, within CA264_16275 at 3787.817 kb on - strand, within CA264_16275 at 3787.974 kb on + strand at 3787.975 kb on - strand at 3787.996 kb on - strand at 3788.054 kb on + strand at 3788.057 kb on - strand at 3788.057 kb on - strand at 3788.110 kb on + strand at 3788.110 kb on + strand at 3788.272 kb on + strand at 3788.272 kb on + strand at 3788.272 kb on + strand at 3788.272 kb on + strand at 3788.273 kb on - strand at 3788.273 kb on - strand at 3788.273 kb on - strand at 3788.277 kb on + strand at 3788.277 kb on + strand at 3788.278 kb on - strand at 3788.278 kb on - strand at 3788.278 kb on - strand at 3788.278 kb on - strand at 3788.281 kb on + strand at 3788.281 kb on + strand at 3788.281 kb on + strand at 3788.282 kb on - strand at 3788.379 kb on + strand at 3788.413 kb on - strand at 3788.413 kb on - strand at 3788.542 kb on + strand, within CA264_16280 at 3788.543 kb on - strand, within CA264_16280 at 3788.580 kb on + strand, within CA264_16280 at 3788.723 kb on - strand, within CA264_16280 at 3788.842 kb on + strand, within CA264_16280 at 3788.842 kb on + strand, within CA264_16280 at 3788.843 kb on - strand, within CA264_16280 at 3788.899 kb on + strand, within CA264_16280 at 3788.899 kb on + strand, within CA264_16280 at 3788.899 kb on + strand, within CA264_16280 at 3788.972 kb on - strand, within CA264_16280 at 3788.975 kb on + strand, within CA264_16280 at 3788.993 kb on + strand, within CA264_16280 at 3789.160 kb on + strand, within CA264_16280 at 3789.161 kb on - strand, within CA264_16280 at 3789.253 kb on + strand, within CA264_16280 at 3789.253 kb on + strand, within CA264_16280 at 3789.254 kb on - strand, within CA264_16280 at 3789.254 kb on - strand, within CA264_16280 at 3789.254 kb on - strand, within CA264_16280 at 3789.388 kb on - strand, within CA264_16280 at 3789.392 kb on + strand, within CA264_16280 at 3789.420 kb on + strand, within CA264_16280 at 3789.467 kb on + strand, within CA264_16280 at 3789.526 kb on + strand, within CA264_16280 at 3789.526 kb on + strand, within CA264_16280 at 3789.526 kb on + strand, within CA264_16280 at 3789.526 kb on + strand, within CA264_16280 at 3789.527 kb on - strand, within CA264_16280 at 3789.580 kb on + strand, within CA264_16280 at 3789.580 kb on + strand, within CA264_16280 at 3789.581 kb on - strand, within CA264_16280 at 3789.581 kb on - strand, within CA264_16280 at 3789.703 kb on + strand at 3789.703 kb on + strand at 3789.703 kb on + strand at 3789.704 kb on - strand at 3789.704 kb on - strand at 3789.735 kb on - strand at 3789.735 kb on - strand at 3789.830 kb on + strand at 3789.879 kb on + strand at 3789.879 kb on + strand at 3789.879 kb on + strand at 3789.880 kb on - strand at 3789.882 kb on + strand at 3789.884 kb on + strand at 3789.997 kb on - strand, within CA264_16285 at 3790.083 kb on + strand, within CA264_16285 at 3790.083 kb on + strand, within CA264_16285 at 3790.089 kb on + strand, within CA264_16285 at 3790.090 kb on - strand, within CA264_16285 at 3790.090 kb on - strand, within CA264_16285 at 3790.227 kb on + strand, within CA264_16285 at 3790.352 kb on + strand, within CA264_16285 at 3790.375 kb on - strand, within CA264_16285 at 3790.397 kb on - strand, within CA264_16285 at 3790.400 kb on + strand, within CA264_16285 at 3790.401 kb on - strand, within CA264_16285 at 3790.463 kb on + strand, within CA264_16285 at 3790.513 kb on - strand, within CA264_16285 at 3790.581 kb on + strand, within CA264_16285 at 3790.709 kb on - strand at 3790.808 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,787,347 + CA264_16275 0.31 -0.3 3,787,348 - CA264_16275 0.31 -0.8 3,787,350 + CA264_16275 0.31 +0.3 3,787,351 - CA264_16275 0.31 -0.8 3,787,351 - CA264_16275 0.31 -0.5 3,787,351 - CA264_16275 0.31 -0.5 3,787,358 + CA264_16275 0.32 -0.5 3,787,358 + CA264_16275 0.32 -0.1 3,787,359 - CA264_16275 0.32 -0.3 3,787,416 + CA264_16275 0.38 -0.6 3,787,425 + CA264_16275 0.39 -2.9 3,787,425 + CA264_16275 0.39 +0.1 3,787,426 - CA264_16275 0.40 -1.2 3,787,435 + CA264_16275 0.41 -0.9 3,787,436 - CA264_16275 0.41 -0.6 3,787,436 - CA264_16275 0.41 +1.0 3,787,436 - CA264_16275 0.41 -0.5 3,787,559 + CA264_16275 0.54 -0.9 3,787,572 + CA264_16275 0.56 -0.4 3,787,652 + CA264_16275 0.65 -0.6 3,787,653 - CA264_16275 0.65 -0.3 3,787,817 - CA264_16275 0.83 -0.5 3,787,974 + -0.3 3,787,975 - +0.4 3,787,996 - -0.4 3,788,054 + -1.2 3,788,057 - -0.6 3,788,057 - -0.5 3,788,110 + -0.6 3,788,110 + -1.3 3,788,272 + -0.5 3,788,272 + -0.1 3,788,272 + -0.8 3,788,272 + -0.6 3,788,273 - -0.7 3,788,273 - -0.5 3,788,273 - +0.0 3,788,277 + -0.7 3,788,277 + -0.8 3,788,278 - -0.5 3,788,278 - -0.6 3,788,278 - -0.7 3,788,278 - -1.2 3,788,281 + -0.9 3,788,281 + -1.2 3,788,281 + -0.9 3,788,282 - -0.5 3,788,379 + -0.5 3,788,413 - -0.7 3,788,413 - -0.4 3,788,542 + CA264_16280 0.15 -0.6 3,788,543 - CA264_16280 0.15 +0.1 3,788,580 + CA264_16280 0.18 -1.0 3,788,723 - CA264_16280 0.27 -0.6 3,788,842 + CA264_16280 0.35 -0.3 3,788,842 + CA264_16280 0.35 -0.2 3,788,843 - CA264_16280 0.35 -1.0 3,788,899 + CA264_16280 0.39 -0.2 3,788,899 + CA264_16280 0.39 -2.1 3,788,899 + CA264_16280 0.39 -0.8 3,788,972 - CA264_16280 0.44 -0.9 3,788,975 + CA264_16280 0.44 -0.4 3,788,993 + CA264_16280 0.45 -0.3 3,789,160 + CA264_16280 0.56 -0.8 3,789,161 - CA264_16280 0.56 -1.1 3,789,253 + CA264_16280 0.62 +0.3 3,789,253 + CA264_16280 0.62 -0.2 3,789,254 - CA264_16280 0.62 -0.5 3,789,254 - CA264_16280 0.62 -0.2 3,789,254 - CA264_16280 0.62 -0.2 3,789,388 - CA264_16280 0.71 -0.1 3,789,392 + CA264_16280 0.71 -0.6 3,789,420 + CA264_16280 0.73 +0.0 3,789,467 + CA264_16280 0.76 -0.1 3,789,526 + CA264_16280 0.80 -2.3 3,789,526 + CA264_16280 0.80 +0.1 3,789,526 + CA264_16280 0.80 -0.1 3,789,526 + CA264_16280 0.80 -0.9 3,789,527 - CA264_16280 0.80 -0.2 3,789,580 + CA264_16280 0.84 -0.6 3,789,580 + CA264_16280 0.84 -0.6 3,789,581 - CA264_16280 0.84 -1.8 3,789,581 - CA264_16280 0.84 +0.1 3,789,703 + -0.3 3,789,703 + -1.5 3,789,703 + -0.3 3,789,704 - -0.5 3,789,704 - -1.2 3,789,735 - -0.4 3,789,735 - -1.4 3,789,830 + -0.6 3,789,879 + -0.3 3,789,879 + -0.4 3,789,879 + -0.6 3,789,880 - -0.9 3,789,882 + -0.4 3,789,884 + -0.4 3,789,997 - CA264_16285 0.21 -0.5 3,790,083 + CA264_16285 0.31 -0.5 3,790,083 + CA264_16285 0.31 -1.7 3,790,089 + CA264_16285 0.31 -0.6 3,790,090 - CA264_16285 0.32 -0.9 3,790,090 - CA264_16285 0.32 -0.7 3,790,227 + CA264_16285 0.47 -1.6 3,790,352 + CA264_16285 0.61 +0.2 3,790,375 - CA264_16285 0.63 -0.2 3,790,397 - CA264_16285 0.66 -2.0 3,790,400 + CA264_16285 0.66 -1.4 3,790,401 - CA264_16285 0.66 -0.5 3,790,463 + CA264_16285 0.73 -0.6 3,790,513 - CA264_16285 0.79 -0.7 3,790,581 + CA264_16285 0.86 -0.3 3,790,709 - -0.9 3,790,808 - +0.2
Or see this region's nucleotide sequence