Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13645 and CA264_13650 are separated by 260 nucleotides CA264_13650 and CA264_13655 are separated by 247 nucleotides CA264_13655 and CA264_13660 are separated by 243 nucleotides
CA264_13645: CA264_13645 - hypothetical protein, at 3,190,865 to 3,191,122
_13645
CA264_13650: CA264_13650 - hypothetical protein, at 3,191,383 to 3,191,694
_13650
CA264_13655: CA264_13655 - DNA metabolism protein, at 3,191,942 to 3,192,718
_13655
CA264_13660: CA264_13660 - putative DNA modification/repair radical SAM protein, at 3,192,962 to 3,194,227
_13660
Position (kb)
3191
3192
3193 Strain fitness (log2 ratio)
-2
-1
0
1 at 3190.959 kb on - strand, within CA264_13645 at 3191.032 kb on + strand, within CA264_13645 at 3191.033 kb on - strand, within CA264_13645 at 3191.105 kb on + strand at 3191.133 kb on - strand at 3191.137 kb on + strand at 3191.157 kb on + strand at 3191.217 kb on + strand at 3191.217 kb on + strand at 3191.217 kb on + strand at 3191.218 kb on - strand at 3191.221 kb on - strand at 3191.222 kb on + strand at 3191.223 kb on - strand at 3191.223 kb on - strand at 3191.226 kb on + strand at 3191.261 kb on + strand at 3191.323 kb on + strand at 3191.324 kb on - strand at 3191.362 kb on - strand at 3191.377 kb on - strand at 3191.390 kb on + strand at 3191.391 kb on - strand at 3191.520 kb on + strand, within CA264_13650 at 3191.564 kb on - strand, within CA264_13650 at 3191.585 kb on + strand, within CA264_13650 at 3191.585 kb on + strand, within CA264_13650 at 3191.717 kb on - strand at 3191.825 kb on - strand at 3191.839 kb on - strand at 3191.840 kb on + strand at 3191.840 kb on + strand at 3191.841 kb on - strand at 3191.841 kb on - strand at 3191.841 kb on - strand at 3191.843 kb on - strand at 3191.844 kb on + strand at 3191.844 kb on + strand at 3191.845 kb on - strand at 3191.845 kb on - strand at 3191.848 kb on + strand at 3191.848 kb on + strand at 3191.848 kb on + strand at 3191.856 kb on + strand at 3191.856 kb on + strand at 3191.858 kb on + strand at 3191.944 kb on - strand at 3191.944 kb on - strand at 3191.976 kb on + strand at 3192.037 kb on + strand, within CA264_13655 at 3192.038 kb on - strand, within CA264_13655 at 3192.080 kb on - strand, within CA264_13655 at 3192.158 kb on + strand, within CA264_13655 at 3192.168 kb on - strand, within CA264_13655 at 3192.175 kb on - strand, within CA264_13655 at 3192.204 kb on + strand, within CA264_13655 at 3192.402 kb on + strand, within CA264_13655 at 3192.403 kb on - strand, within CA264_13655 at 3192.415 kb on + strand, within CA264_13655 at 3192.416 kb on - strand, within CA264_13655 at 3192.443 kb on + strand, within CA264_13655 at 3192.444 kb on - strand, within CA264_13655 at 3192.444 kb on - strand, within CA264_13655 at 3192.448 kb on - strand, within CA264_13655 at 3192.448 kb on - strand, within CA264_13655 at 3192.489 kb on + strand, within CA264_13655 at 3192.490 kb on - strand, within CA264_13655 at 3192.493 kb on + strand, within CA264_13655 at 3192.493 kb on + strand, within CA264_13655 at 3192.493 kb on + strand, within CA264_13655 at 3192.494 kb on - strand, within CA264_13655 at 3192.494 kb on - strand, within CA264_13655 at 3192.494 kb on - strand, within CA264_13655 at 3192.494 kb on - strand, within CA264_13655 at 3192.495 kb on + strand, within CA264_13655 at 3192.495 kb on + strand, within CA264_13655 at 3192.495 kb on + strand, within CA264_13655 at 3192.498 kb on + strand, within CA264_13655 at 3192.499 kb on - strand, within CA264_13655 at 3192.499 kb on - strand, within CA264_13655 at 3192.601 kb on + strand, within CA264_13655 at 3192.601 kb on + strand, within CA264_13655 at 3192.602 kb on - strand, within CA264_13655 at 3192.602 kb on - strand, within CA264_13655 at 3192.657 kb on + strand at 3192.708 kb on + strand at 3192.708 kb on + strand at 3192.735 kb on + strand at 3192.881 kb on - strand at 3192.901 kb on + strand at 3192.903 kb on + strand at 3192.903 kb on + strand at 3192.904 kb on - strand at 3193.359 kb on + strand, within CA264_13660 at 3193.600 kb on + strand, within CA264_13660 at 3193.672 kb on + strand, within CA264_13660
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,190,959 - CA264_13645 0.36 -0.3 3,191,032 + CA264_13645 0.65 +0.7 3,191,033 - CA264_13645 0.65 -0.6 3,191,105 + -0.6 3,191,133 - +0.2 3,191,137 + -0.6 3,191,157 + -0.1 3,191,217 + -1.2 3,191,217 + +0.8 3,191,217 + -0.2 3,191,218 - +0.2 3,191,221 - +0.1 3,191,222 + +1.0 3,191,223 - -0.8 3,191,223 - -0.7 3,191,226 + -0.3 3,191,261 + +0.2 3,191,323 + -0.6 3,191,324 - -0.4 3,191,362 - +0.6 3,191,377 - +0.2 3,191,390 + -0.2 3,191,391 - -0.2 3,191,520 + CA264_13650 0.44 +0.9 3,191,564 - CA264_13650 0.58 -1.1 3,191,585 + CA264_13650 0.65 -1.7 3,191,585 + CA264_13650 0.65 -0.8 3,191,717 - -0.6 3,191,825 - -0.7 3,191,839 - -1.5 3,191,840 + -0.4 3,191,840 + -0.5 3,191,841 - -1.1 3,191,841 - -0.4 3,191,841 - +0.8 3,191,843 - +0.4 3,191,844 + -0.6 3,191,844 + -0.7 3,191,845 - -1.1 3,191,845 - -0.4 3,191,848 + -0.7 3,191,848 + -0.5 3,191,848 + -0.3 3,191,856 + -1.3 3,191,856 + -0.9 3,191,858 + -0.8 3,191,944 - -0.6 3,191,944 - -0.0 3,191,976 + +1.2 3,192,037 + CA264_13655 0.12 +0.2 3,192,038 - CA264_13655 0.12 +0.2 3,192,080 - CA264_13655 0.18 -0.5 3,192,158 + CA264_13655 0.28 -1.6 3,192,168 - CA264_13655 0.29 +0.4 3,192,175 - CA264_13655 0.30 -2.0 3,192,204 + CA264_13655 0.34 -0.7 3,192,402 + CA264_13655 0.59 +0.1 3,192,403 - CA264_13655 0.59 +1.2 3,192,415 + CA264_13655 0.61 -1.3 3,192,416 - CA264_13655 0.61 -0.3 3,192,443 + CA264_13655 0.64 -0.3 3,192,444 - CA264_13655 0.65 -0.7 3,192,444 - CA264_13655 0.65 -0.1 3,192,448 - CA264_13655 0.65 -0.7 3,192,448 - CA264_13655 0.65 +0.5 3,192,489 + CA264_13655 0.70 -0.2 3,192,490 - CA264_13655 0.71 +0.3 3,192,493 + CA264_13655 0.71 -1.1 3,192,493 + CA264_13655 0.71 -1.8 3,192,493 + CA264_13655 0.71 -0.5 3,192,494 - CA264_13655 0.71 -1.1 3,192,494 - CA264_13655 0.71 -0.4 3,192,494 - CA264_13655 0.71 +0.8 3,192,494 - CA264_13655 0.71 -1.0 3,192,495 + CA264_13655 0.71 -0.1 3,192,495 + CA264_13655 0.71 -0.5 3,192,495 + CA264_13655 0.71 -0.9 3,192,498 + CA264_13655 0.72 -0.8 3,192,499 - CA264_13655 0.72 +0.8 3,192,499 - CA264_13655 0.72 -1.3 3,192,601 + CA264_13655 0.85 -0.4 3,192,601 + CA264_13655 0.85 -1.2 3,192,602 - CA264_13655 0.85 -0.4 3,192,602 - CA264_13655 0.85 -0.3 3,192,657 + -0.7 3,192,708 + -1.9 3,192,708 + -1.6 3,192,735 + -0.4 3,192,881 - +1.2 3,192,901 + +0.2 3,192,903 + -0.3 3,192,903 + -1.1 3,192,904 - -1.6 3,193,359 + CA264_13660 0.31 +0.6 3,193,600 + CA264_13660 0.50 -0.7 3,193,672 + CA264_13660 0.56 -0.9
Or see this region's nucleotide sequence