Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13195 and CA264_13200 are separated by 268 nucleotides CA264_13200 and CA264_13205 are separated by 74 nucleotides CA264_13205 and CA264_13210 are separated by 255 nucleotides
CA264_13195: CA264_13195 - hypothetical protein, at 3,077,142 to 3,078,170
_13195
CA264_13200: CA264_13200 - lysine--tRNA ligase, at 3,078,439 to 3,079,983
_13200
CA264_13205: CA264_13205 - hypothetical protein, at 3,080,058 to 3,080,507
_13205
CA264_13210: CA264_13210 - hypothetical protein, at 3,080,763 to 3,081,101
_13210
Position (kb)
3078
3079
3080 Strain fitness (log2 ratio)
-1
0
1
2 at 3077.472 kb on + strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.475 kb on + strand, within CA264_13195 at 3077.476 kb on - strand, within CA264_13195 at 3077.583 kb on + strand, within CA264_13195 at 3077.584 kb on - strand, within CA264_13195 at 3077.620 kb on - strand, within CA264_13195 at 3077.658 kb on + strand, within CA264_13195 at 3077.659 kb on - strand, within CA264_13195 at 3077.816 kb on - strand, within CA264_13195 at 3077.868 kb on - strand, within CA264_13195 at 3077.871 kb on - strand, within CA264_13195 at 3077.939 kb on - strand, within CA264_13195 at 3077.958 kb on - strand, within CA264_13195 at 3077.995 kb on - strand, within CA264_13195 at 3078.018 kb on + strand, within CA264_13195 at 3078.019 kb on - strand, within CA264_13195 at 3078.103 kb on + strand at 3078.103 kb on + strand at 3078.123 kb on - strand at 3078.169 kb on - strand at 3078.253 kb on + strand at 3078.253 kb on + strand at 3078.270 kb on - strand at 3078.274 kb on + strand at 3078.386 kb on + strand at 3078.410 kb on - strand at 3078.447 kb on - strand at 3080.059 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.085 kb on - strand at 3080.100 kb on - strand at 3080.227 kb on - strand, within CA264_13205 at 3080.276 kb on + strand, within CA264_13205 at 3080.364 kb on + strand, within CA264_13205 at 3080.382 kb on + strand, within CA264_13205 at 3080.422 kb on + strand, within CA264_13205 at 3080.423 kb on - strand, within CA264_13205 at 3080.443 kb on - strand, within CA264_13205 at 3080.508 kb on - strand at 3080.519 kb on + strand at 3080.540 kb on - strand at 3080.587 kb on - strand at 3080.587 kb on - strand at 3080.607 kb on - strand at 3080.798 kb on + strand, within CA264_13210 at 3080.799 kb on - strand, within CA264_13210 at 3080.964 kb on - strand, within CA264_13210 at 3080.973 kb on - strand, within CA264_13210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,077,472 + CA264_13195 0.32 -0.9 3,077,473 - CA264_13195 0.32 -0.5 3,077,473 - CA264_13195 0.32 +0.0 3,077,473 - CA264_13195 0.32 +0.6 3,077,475 + CA264_13195 0.32 +0.2 3,077,476 - CA264_13195 0.32 +0.1 3,077,583 + CA264_13195 0.43 +0.3 3,077,584 - CA264_13195 0.43 -0.6 3,077,620 - CA264_13195 0.46 -0.7 3,077,658 + CA264_13195 0.50 -0.1 3,077,659 - CA264_13195 0.50 -1.4 3,077,816 - CA264_13195 0.66 -1.0 3,077,868 - CA264_13195 0.71 +0.7 3,077,871 - CA264_13195 0.71 -0.2 3,077,939 - CA264_13195 0.77 +0.5 3,077,958 - CA264_13195 0.79 -0.3 3,077,995 - CA264_13195 0.83 -1.3 3,078,018 + CA264_13195 0.85 -1.2 3,078,019 - CA264_13195 0.85 -0.2 3,078,103 + -0.1 3,078,103 + -1.5 3,078,123 - -0.6 3,078,169 - -0.4 3,078,253 + -1.5 3,078,253 + -1.0 3,078,270 - +1.1 3,078,274 + +0.2 3,078,386 + -0.6 3,078,410 - +2.0 3,078,447 - -0.8 3,080,059 + -0.2 3,080,084 + -0.4 3,080,084 + +0.1 3,080,084 + -0.6 3,080,085 - -0.4 3,080,100 - -0.2 3,080,227 - CA264_13205 0.38 +0.8 3,080,276 + CA264_13205 0.48 -0.6 3,080,364 + CA264_13205 0.68 -1.0 3,080,382 + CA264_13205 0.72 -1.1 3,080,422 + CA264_13205 0.81 -0.1 3,080,423 - CA264_13205 0.81 -1.5 3,080,443 - CA264_13205 0.86 -1.0 3,080,508 - -0.4 3,080,519 + -0.1 3,080,540 - -0.4 3,080,587 - -0.3 3,080,587 - -0.6 3,080,607 - -0.9 3,080,798 + CA264_13210 0.10 -0.7 3,080,799 - CA264_13210 0.11 +0.0 3,080,964 - CA264_13210 0.59 -1.4 3,080,973 - CA264_13210 0.62 -0.7
Or see this region's nucleotide sequence