Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13180 and CA264_13185 are separated by 14 nucleotides CA264_13185 and CA264_13190 are separated by 140 nucleotides
CA264_13180: CA264_13180 - gamma-glutamyltransferase, at 3,070,962 to 3,072,695
_13180
CA264_13185: CA264_13185 - hypothetical protein, at 3,072,710 to 3,073,102
_13185
CA264_13190: CA264_13190 - hypothetical protein, at 3,073,243 to 3,076,728
_13190
Position (kb)
3072
3073
3074 Strain fitness (log2 ratio)
-2
-1
0
1 at 3071.805 kb on + strand, within CA264_13180 at 3071.806 kb on - strand, within CA264_13180 at 3071.806 kb on - strand, within CA264_13180 at 3071.970 kb on + strand, within CA264_13180 at 3071.998 kb on + strand, within CA264_13180 at 3072.137 kb on + strand, within CA264_13180 at 3072.137 kb on + strand, within CA264_13180 at 3072.137 kb on + strand, within CA264_13180 at 3072.233 kb on - strand, within CA264_13180 at 3072.313 kb on + strand, within CA264_13180 at 3072.378 kb on + strand, within CA264_13180 at 3072.379 kb on - strand, within CA264_13180 at 3072.385 kb on + strand, within CA264_13180 at 3072.386 kb on - strand, within CA264_13180 at 3072.521 kb on - strand, within CA264_13180 at 3072.581 kb on + strand at 3072.613 kb on + strand at 3072.647 kb on - strand at 3072.693 kb on + strand at 3072.694 kb on - strand at 3072.713 kb on + strand at 3072.714 kb on - strand at 3072.714 kb on - strand at 3072.754 kb on - strand, within CA264_13185 at 3072.754 kb on - strand, within CA264_13185 at 3072.754 kb on - strand, within CA264_13185 at 3072.787 kb on + strand, within CA264_13185 at 3072.819 kb on - strand, within CA264_13185 at 3072.914 kb on + strand, within CA264_13185 at 3072.998 kb on - strand, within CA264_13185 at 3073.032 kb on + strand, within CA264_13185 at 3073.076 kb on - strand at 3073.082 kb on + strand at 3073.082 kb on + strand at 3073.116 kb on - strand at 3073.118 kb on - strand at 3073.126 kb on + strand at 3073.161 kb on - strand at 3073.161 kb on - strand at 3073.166 kb on - strand at 3073.301 kb on + strand at 3073.301 kb on + strand at 3073.302 kb on - strand at 3073.302 kb on - strand at 3073.302 kb on - strand at 3073.383 kb on + strand at 3073.384 kb on - strand at 3073.384 kb on - strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.457 kb on - strand at 3073.514 kb on - strand at 3073.514 kb on - strand at 3073.515 kb on + strand at 3073.527 kb on + strand at 3073.543 kb on + strand at 3073.544 kb on - strand at 3073.544 kb on - strand at 3073.573 kb on + strand at 3073.605 kb on - strand, within CA264_13190 at 3073.675 kb on - strand, within CA264_13190 at 3073.733 kb on + strand, within CA264_13190 at 3073.908 kb on + strand, within CA264_13190 at 3073.916 kb on - strand, within CA264_13190 at 3073.929 kb on + strand, within CA264_13190 at 3073.929 kb on + strand, within CA264_13190 at 3073.929 kb on + strand, within CA264_13190 at 3073.980 kb on + strand, within CA264_13190 at 3073.981 kb on - strand, within CA264_13190 at 3073.981 kb on - strand, within CA264_13190 at 3073.981 kb on - strand, within CA264_13190 at 3073.992 kb on + strand, within CA264_13190 at 3073.992 kb on + strand, within CA264_13190 at 3073.993 kb on - strand, within CA264_13190 at 3073.994 kb on + strand, within CA264_13190 at 3073.994 kb on + strand, within CA264_13190 at 3073.994 kb on + strand, within CA264_13190 at 3074.060 kb on + strand, within CA264_13190 at 3074.061 kb on - strand, within CA264_13190 at 3074.064 kb on + strand, within CA264_13190 at 3074.065 kb on - strand, within CA264_13190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,071,805 + CA264_13180 0.49 -0.4 3,071,806 - CA264_13180 0.49 -0.2 3,071,806 - CA264_13180 0.49 +0.1 3,071,970 + CA264_13180 0.58 -1.3 3,071,998 + CA264_13180 0.60 +0.9 3,072,137 + CA264_13180 0.68 +0.1 3,072,137 + CA264_13180 0.68 +1.6 3,072,137 + CA264_13180 0.68 -0.3 3,072,233 - CA264_13180 0.73 +0.3 3,072,313 + CA264_13180 0.78 -0.6 3,072,378 + CA264_13180 0.82 +0.4 3,072,379 - CA264_13180 0.82 -0.5 3,072,385 + CA264_13180 0.82 -0.9 3,072,386 - CA264_13180 0.82 -0.4 3,072,521 - CA264_13180 0.90 -0.2 3,072,581 + +0.6 3,072,613 + -1.4 3,072,647 - +0.1 3,072,693 + +0.5 3,072,694 - -0.5 3,072,713 + -0.7 3,072,714 - -0.6 3,072,714 - +1.4 3,072,754 - CA264_13185 0.11 -0.6 3,072,754 - CA264_13185 0.11 -0.5 3,072,754 - CA264_13185 0.11 -1.4 3,072,787 + CA264_13185 0.20 -0.2 3,072,819 - CA264_13185 0.28 -1.6 3,072,914 + CA264_13185 0.52 -1.5 3,072,998 - CA264_13185 0.73 +1.1 3,073,032 + CA264_13185 0.82 -2.0 3,073,076 - -0.7 3,073,082 + -2.0 3,073,082 + -0.9 3,073,116 - -0.9 3,073,118 - -1.6 3,073,126 + -2.0 3,073,161 - -0.8 3,073,161 - -0.9 3,073,166 - -0.3 3,073,301 + -0.4 3,073,301 + -0.6 3,073,302 - -1.2 3,073,302 - -1.8 3,073,302 - -0.9 3,073,383 + +0.7 3,073,384 - -0.1 3,073,384 - -1.5 3,073,456 + +0.1 3,073,456 + -2.0 3,073,456 + -0.4 3,073,456 + -1.2 3,073,456 + -0.0 3,073,457 - -1.8 3,073,514 - -0.1 3,073,514 - -1.5 3,073,515 + -0.2 3,073,527 + -0.6 3,073,543 + -0.2 3,073,544 - -1.5 3,073,544 - -2.5 3,073,573 + -0.7 3,073,605 - CA264_13190 0.10 -0.1 3,073,675 - CA264_13190 0.12 -0.2 3,073,733 + CA264_13190 0.14 -0.4 3,073,908 + CA264_13190 0.19 -1.7 3,073,916 - CA264_13190 0.19 -0.8 3,073,929 + CA264_13190 0.20 -0.4 3,073,929 + CA264_13190 0.20 -1.0 3,073,929 + CA264_13190 0.20 -1.0 3,073,980 + CA264_13190 0.21 -1.4 3,073,981 - CA264_13190 0.21 -0.8 3,073,981 - CA264_13190 0.21 +0.7 3,073,981 - CA264_13190 0.21 +0.5 3,073,992 + CA264_13190 0.21 -0.2 3,073,992 + CA264_13190 0.21 -0.4 3,073,993 - CA264_13190 0.22 -0.8 3,073,994 + CA264_13190 0.22 +0.0 3,073,994 + CA264_13190 0.22 -0.2 3,073,994 + CA264_13190 0.22 -0.2 3,074,060 + CA264_13190 0.23 +0.8 3,074,061 - CA264_13190 0.23 -0.5 3,074,064 + CA264_13190 0.24 -1.6 3,074,065 - CA264_13190 0.24 +0.0
Or see this region's nucleotide sequence