Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11705 and CA264_11710 are separated by 86 nucleotides CA264_11710 and CA264_11715 are separated by 65 nucleotides CA264_11715 and CA264_11720 are separated by 61 nucleotides CA264_11720 and CA264_11725 are separated by 143 nucleotides CA264_11725 and CA264_11730 overlap by 26 nucleotides
CA264_11705: CA264_11705 - hypothetical protein, at 2,728,268 to 2,729,239
_11705
CA264_11710: CA264_11710 - DNA-binding protein, at 2,729,326 to 2,729,661
_11710
CA264_11715: CA264_11715 - hypothetical protein, at 2,729,727 to 2,729,936
_11715
CA264_11720: CA264_11720 - hypothetical protein, at 2,729,998 to 2,730,930
_11720
CA264_11725: CA264_11725 - hypothetical protein, at 2,731,074 to 2,731,466
_11725
CA264_11730: CA264_11730 - hypothetical protein, at 2,731,441 to 2,732,391
_11730
Position (kb)
2729
2730
2731 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2729.074 kb on - strand, within CA264_11705 at 2729.074 kb on - strand, within CA264_11705 at 2729.074 kb on - strand, within CA264_11705 at 2729.074 kb on - strand, within CA264_11705 at 2729.131 kb on + strand, within CA264_11705 at 2729.190 kb on - strand at 2729.190 kb on - strand at 2729.190 kb on - strand at 2729.241 kb on + strand at 2729.242 kb on - strand at 2729.242 kb on - strand at 2729.272 kb on - strand at 2729.293 kb on - strand at 2729.337 kb on + strand at 2729.337 kb on + strand at 2729.495 kb on - strand, within CA264_11710 at 2729.539 kb on - strand, within CA264_11710 at 2729.548 kb on + strand, within CA264_11710 at 2729.549 kb on - strand, within CA264_11710 at 2729.601 kb on + strand, within CA264_11710 at 2729.803 kb on - strand, within CA264_11715 at 2729.803 kb on - strand, within CA264_11715 at 2729.803 kb on - strand, within CA264_11715 at 2729.919 kb on + strand at 2729.920 kb on - strand at 2729.977 kb on + strand at 2729.986 kb on - strand at 2729.994 kb on + strand at 2730.015 kb on + strand at 2730.094 kb on + strand, within CA264_11720 at 2730.094 kb on + strand, within CA264_11720 at 2730.095 kb on - strand, within CA264_11720 at 2730.163 kb on + strand, within CA264_11720 at 2730.310 kb on - strand, within CA264_11720 at 2730.416 kb on - strand, within CA264_11720 at 2730.416 kb on - strand, within CA264_11720 at 2730.416 kb on - strand, within CA264_11720 at 2730.470 kb on + strand, within CA264_11720 at 2730.539 kb on + strand, within CA264_11720 at 2730.713 kb on + strand, within CA264_11720 at 2730.844 kb on + strand at 2730.844 kb on + strand at 2730.944 kb on - strand at 2731.048 kb on - strand at 2731.061 kb on - strand at 2731.061 kb on - strand at 2731.062 kb on + strand at 2731.109 kb on + strand at 2731.421 kb on - strand, within CA264_11725 at 2731.421 kb on - strand, within CA264_11725 at 2731.433 kb on - strand at 2731.433 kb on - strand at 2731.459 kb on + strand at 2731.518 kb on - strand at 2731.540 kb on - strand, within CA264_11730 at 2731.640 kb on + strand, within CA264_11730 at 2731.659 kb on + strand, within CA264_11730 at 2731.659 kb on + strand, within CA264_11730 at 2731.694 kb on - strand, within CA264_11730 at 2731.694 kb on - strand, within CA264_11730 at 2731.695 kb on + strand, within CA264_11730 at 2731.727 kb on - strand, within CA264_11730 at 2731.778 kb on - strand, within CA264_11730 at 2731.793 kb on - strand, within CA264_11730 at 2731.873 kb on + strand, within CA264_11730 at 2731.930 kb on - strand, within CA264_11730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,729,074 - CA264_11705 0.83 -1.0 2,729,074 - CA264_11705 0.83 -0.6 2,729,074 - CA264_11705 0.83 -0.9 2,729,074 - CA264_11705 0.83 -1.8 2,729,131 + CA264_11705 0.89 +0.6 2,729,190 - +1.0 2,729,190 - +0.7 2,729,190 - -0.1 2,729,241 + -0.3 2,729,242 - -0.6 2,729,242 - +0.1 2,729,272 - +0.4 2,729,293 - -0.1 2,729,337 + -0.7 2,729,337 + +1.7 2,729,495 - CA264_11710 0.50 -0.7 2,729,539 - CA264_11710 0.63 -1.0 2,729,548 + CA264_11710 0.66 -0.1 2,729,549 - CA264_11710 0.66 -0.3 2,729,601 + CA264_11710 0.82 -1.0 2,729,803 - CA264_11715 0.36 -0.1 2,729,803 - CA264_11715 0.36 +1.6 2,729,803 - CA264_11715 0.36 -1.9 2,729,919 + +0.8 2,729,920 - -1.1 2,729,977 + -0.3 2,729,986 - -0.7 2,729,994 + -1.1 2,730,015 + +0.7 2,730,094 + CA264_11720 0.10 +1.7 2,730,094 + CA264_11720 0.10 -0.2 2,730,095 - CA264_11720 0.10 +0.2 2,730,163 + CA264_11720 0.18 +2.3 2,730,310 - CA264_11720 0.33 -0.4 2,730,416 - CA264_11720 0.45 -0.3 2,730,416 - CA264_11720 0.45 +0.4 2,730,416 - CA264_11720 0.45 -1.2 2,730,470 + CA264_11720 0.51 +0.0 2,730,539 + CA264_11720 0.58 -0.3 2,730,713 + CA264_11720 0.77 -0.0 2,730,844 + -0.2 2,730,844 + -0.3 2,730,944 - +2.0 2,731,048 - +0.5 2,731,061 - -0.3 2,731,061 - -0.8 2,731,062 + -0.2 2,731,109 + -1.3 2,731,421 - CA264_11725 0.88 -2.5 2,731,421 - CA264_11725 0.88 -0.3 2,731,433 - -0.7 2,731,433 - -0.6 2,731,459 + -0.7 2,731,518 - +0.2 2,731,540 - CA264_11730 0.10 -0.4 2,731,640 + CA264_11730 0.21 -1.5 2,731,659 + CA264_11730 0.23 -0.9 2,731,659 + CA264_11730 0.23 +0.4 2,731,694 - CA264_11730 0.27 +0.1 2,731,694 - CA264_11730 0.27 +0.1 2,731,695 + CA264_11730 0.27 -0.5 2,731,727 - CA264_11730 0.30 +0.6 2,731,778 - CA264_11730 0.35 +1.0 2,731,793 - CA264_11730 0.37 -0.0 2,731,873 + CA264_11730 0.45 +1.4 2,731,930 - CA264_11730 0.51 -0.6
Or see this region's nucleotide sequence