Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08470 and CA264_08475 are separated by 27 nucleotides CA264_08475 and CA264_08480 are separated by 165 nucleotides
CA264_08470: CA264_08470 - glutamyl-tRNA reductase, at 1,966,041 to 1,967,387
_08470
CA264_08475: CA264_08475 - hypothetical protein, at 1,967,415 to 1,967,933
_08475
CA264_08480: CA264_08480 - murein transglycosylase, at 1,968,099 to 1,969,010
_08480
Position (kb)
1967
1968 Strain fitness (log2 ratio)
-2
-1
0
1 at 1966.436 kb on + strand, within CA264_08470 at 1966.645 kb on + strand, within CA264_08470 at 1966.679 kb on + strand, within CA264_08470 at 1966.790 kb on - strand, within CA264_08470 at 1966.835 kb on - strand, within CA264_08470 at 1966.884 kb on + strand, within CA264_08470 at 1966.884 kb on + strand, within CA264_08470 at 1966.884 kb on + strand, within CA264_08470 at 1966.885 kb on - strand, within CA264_08470 at 1966.885 kb on - strand, within CA264_08470 at 1966.940 kb on - strand, within CA264_08470 at 1966.940 kb on - strand, within CA264_08470 at 1966.981 kb on + strand, within CA264_08470 at 1966.993 kb on + strand, within CA264_08470 at 1966.993 kb on + strand, within CA264_08470 at 1966.994 kb on - strand, within CA264_08470 at 1966.994 kb on - strand, within CA264_08470 at 1966.997 kb on + strand, within CA264_08470 at 1966.997 kb on + strand, within CA264_08470 at 1966.997 kb on + strand, within CA264_08470 at 1966.998 kb on - strand, within CA264_08470 at 1966.998 kb on - strand, within CA264_08470 at 1967.055 kb on - strand, within CA264_08470 at 1967.099 kb on - strand, within CA264_08470 at 1967.108 kb on - strand, within CA264_08470 at 1967.162 kb on - strand, within CA264_08470 at 1967.162 kb on - strand, within CA264_08470 at 1967.243 kb on - strand, within CA264_08470 at 1967.295 kb on - strand at 1967.348 kb on - strand at 1967.371 kb on + strand at 1967.795 kb on + strand, within CA264_08475 at 1967.796 kb on - strand, within CA264_08475 at 1967.959 kb on + strand at 1967.960 kb on - strand at 1967.971 kb on - strand at 1967.998 kb on - strand at 1968.012 kb on + strand at 1968.012 kb on + strand at 1968.020 kb on - strand at 1968.020 kb on - strand at 1968.020 kb on - strand at 1968.101 kb on - strand at 1968.121 kb on + strand at 1968.149 kb on + strand at 1968.188 kb on + strand at 1968.189 kb on - strand at 1968.250 kb on - strand, within CA264_08480 at 1968.304 kb on + strand, within CA264_08480 at 1968.305 kb on - strand, within CA264_08480 at 1968.355 kb on + strand, within CA264_08480 at 1968.355 kb on + strand, within CA264_08480 at 1968.379 kb on + strand, within CA264_08480 at 1968.380 kb on - strand, within CA264_08480 at 1968.389 kb on - strand, within CA264_08480 at 1968.391 kb on + strand, within CA264_08480 at 1968.392 kb on - strand, within CA264_08480 at 1968.448 kb on + strand, within CA264_08480 at 1968.449 kb on - strand, within CA264_08480 at 1968.633 kb on - strand, within CA264_08480 at 1968.667 kb on + strand, within CA264_08480 at 1968.770 kb on - strand, within CA264_08480
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,966,436 + CA264_08470 0.29 -0.5 1,966,645 + CA264_08470 0.45 -2.4 1,966,679 + CA264_08470 0.47 -0.4 1,966,790 - CA264_08470 0.56 -0.5 1,966,835 - CA264_08470 0.59 +0.4 1,966,884 + CA264_08470 0.63 +0.6 1,966,884 + CA264_08470 0.63 -0.3 1,966,884 + CA264_08470 0.63 -0.0 1,966,885 - CA264_08470 0.63 -1.2 1,966,885 - CA264_08470 0.63 +0.3 1,966,940 - CA264_08470 0.67 -0.5 1,966,940 - CA264_08470 0.67 -0.0 1,966,981 + CA264_08470 0.70 +0.0 1,966,993 + CA264_08470 0.71 -0.7 1,966,993 + CA264_08470 0.71 +0.6 1,966,994 - CA264_08470 0.71 -0.1 1,966,994 - CA264_08470 0.71 +0.1 1,966,997 + CA264_08470 0.71 -1.1 1,966,997 + CA264_08470 0.71 +1.6 1,966,997 + CA264_08470 0.71 -0.1 1,966,998 - CA264_08470 0.71 -1.4 1,966,998 - CA264_08470 0.71 -0.9 1,967,055 - CA264_08470 0.75 -1.1 1,967,099 - CA264_08470 0.79 -0.5 1,967,108 - CA264_08470 0.79 -0.7 1,967,162 - CA264_08470 0.83 -0.6 1,967,162 - CA264_08470 0.83 -0.9 1,967,243 - CA264_08470 0.89 -0.9 1,967,295 - -0.1 1,967,348 - +0.3 1,967,371 + +1.1 1,967,795 + CA264_08475 0.73 -0.7 1,967,796 - CA264_08475 0.73 +1.5 1,967,959 + +1.0 1,967,960 - -0.9 1,967,971 - +1.4 1,967,998 - +0.9 1,968,012 + -1.2 1,968,012 + +0.1 1,968,020 - -1.4 1,968,020 - -1.4 1,968,020 - -0.5 1,968,101 - -0.4 1,968,121 + -2.2 1,968,149 + +0.5 1,968,188 + +0.1 1,968,189 - -0.1 1,968,250 - CA264_08480 0.17 -0.0 1,968,304 + CA264_08480 0.22 -0.1 1,968,305 - CA264_08480 0.23 -1.4 1,968,355 + CA264_08480 0.28 +0.5 1,968,355 + CA264_08480 0.28 +1.2 1,968,379 + CA264_08480 0.31 -0.4 1,968,380 - CA264_08480 0.31 -0.7 1,968,389 - CA264_08480 0.32 -1.3 1,968,391 + CA264_08480 0.32 +1.0 1,968,392 - CA264_08480 0.32 -0.4 1,968,448 + CA264_08480 0.38 +0.2 1,968,449 - CA264_08480 0.38 -1.3 1,968,633 - CA264_08480 0.59 +0.4 1,968,667 + CA264_08480 0.62 +0.9 1,968,770 - CA264_08480 0.74 +0.1
Or see this region's nucleotide sequence