Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08415 and CA264_08420 are separated by 76 nucleotides
CA264_08415: CA264_08415 - hypothetical protein, at 1,949,616 to 1,950,479
_08415
CA264_08420: CA264_08420 - AraC family transcriptional regulator, at 1,950,556 to 1,951,374
_08420
Position (kb)
1949
1950
1951 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1948.616 kb on - strand at 1948.623 kb on + strand at 1948.624 kb on - strand at 1948.681 kb on + strand at 1948.681 kb on + strand at 1948.681 kb on + strand at 1948.682 kb on - strand at 1948.682 kb on - strand at 1948.682 kb on - strand at 1948.682 kb on - strand at 1948.690 kb on - strand at 1948.724 kb on + strand at 1948.724 kb on + strand at 1948.724 kb on + strand at 1948.748 kb on + strand at 1948.756 kb on + strand at 1948.756 kb on + strand at 1948.821 kb on - strand at 1948.821 kb on - strand at 1948.879 kb on + strand at 1948.886 kb on - strand at 1948.888 kb on - strand at 1948.950 kb on + strand at 1949.012 kb on + strand at 1949.019 kb on - strand at 1949.020 kb on + strand at 1949.032 kb on + strand at 1949.032 kb on + strand at 1949.080 kb on - strand at 1949.087 kb on + strand at 1949.088 kb on - strand at 1949.111 kb on - strand at 1949.122 kb on + strand at 1949.123 kb on - strand at 1949.126 kb on + strand at 1949.126 kb on + strand at 1949.154 kb on + strand at 1949.154 kb on + strand at 1949.155 kb on - strand at 1949.166 kb on - strand at 1949.204 kb on + strand at 1949.213 kb on - strand at 1949.218 kb on + strand at 1949.220 kb on + strand at 1949.269 kb on + strand at 1949.283 kb on + strand at 1949.284 kb on - strand at 1949.284 kb on - strand at 1949.285 kb on + strand at 1949.352 kb on - strand at 1949.352 kb on - strand at 1949.353 kb on + strand at 1949.354 kb on - strand at 1949.362 kb on - strand at 1949.362 kb on - strand at 1949.364 kb on - strand at 1949.412 kb on - strand at 1949.412 kb on - strand at 1949.412 kb on - strand at 1949.417 kb on + strand at 1949.419 kb on + strand at 1949.419 kb on + strand at 1949.420 kb on - strand at 1949.420 kb on - strand at 1949.483 kb on + strand at 1949.485 kb on + strand at 1949.493 kb on - strand at 1949.493 kb on - strand at 1949.497 kb on + strand at 1949.617 kb on + strand at 1949.617 kb on + strand at 1949.629 kb on - strand at 1949.874 kb on + strand, within CA264_08415 at 1949.894 kb on - strand, within CA264_08415 at 1949.907 kb on + strand, within CA264_08415 at 1949.931 kb on + strand, within CA264_08415 at 1949.983 kb on + strand, within CA264_08415 at 1949.985 kb on + strand, within CA264_08415 at 1950.047 kb on + strand, within CA264_08415 at 1950.223 kb on - strand, within CA264_08415 at 1950.460 kb on + strand at 1950.460 kb on + strand at 1950.482 kb on + strand at 1950.482 kb on + strand at 1950.482 kb on + strand at 1950.483 kb on - strand at 1950.483 kb on - strand at 1950.483 kb on - strand at 1950.486 kb on + strand at 1950.595 kb on + strand at 1950.606 kb on - strand at 1950.609 kb on + strand at 1950.609 kb on + strand at 1950.610 kb on - strand at 1950.620 kb on + strand at 1950.647 kb on - strand, within CA264_08420 at 1950.647 kb on - strand, within CA264_08420 at 1950.651 kb on - strand, within CA264_08420 at 1950.677 kb on + strand, within CA264_08420 at 1950.677 kb on + strand, within CA264_08420 at 1950.678 kb on - strand, within CA264_08420 at 1950.680 kb on + strand, within CA264_08420 at 1950.752 kb on - strand, within CA264_08420 at 1950.906 kb on + strand, within CA264_08420 at 1950.907 kb on - strand, within CA264_08420 at 1950.907 kb on - strand, within CA264_08420 at 1950.932 kb on + strand, within CA264_08420 at 1950.932 kb on + strand, within CA264_08420 at 1951.115 kb on - strand, within CA264_08420 at 1951.136 kb on - strand, within CA264_08420 at 1951.220 kb on + strand, within CA264_08420 at 1951.230 kb on + strand, within CA264_08420 at 1951.231 kb on - strand, within CA264_08420 at 1951.237 kb on - strand, within CA264_08420 at 1951.331 kb on + strand at 1951.339 kb on + strand at 1951.340 kb on - strand at 1951.342 kb on + strand at 1951.380 kb on - strand at 1951.405 kb on - strand at 1951.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,948,616 - -0.4 1,948,623 + +0.9 1,948,624 - +1.5 1,948,681 + -0.2 1,948,681 + -2.2 1,948,681 + -0.9 1,948,682 - +2.7 1,948,682 - -1.3 1,948,682 - +0.4 1,948,682 - -1.7 1,948,690 - -1.7 1,948,724 + -0.0 1,948,724 + -1.6 1,948,724 + +1.3 1,948,748 + +0.7 1,948,756 + -0.4 1,948,756 + -1.0 1,948,821 - -0.3 1,948,821 - +0.9 1,948,879 + -1.2 1,948,886 - -0.3 1,948,888 - -0.4 1,948,950 + -1.7 1,949,012 + +0.1 1,949,019 - -0.5 1,949,020 + -0.1 1,949,032 + -2.0 1,949,032 + -1.3 1,949,080 - -0.9 1,949,087 + +2.5 1,949,088 - +1.9 1,949,111 - -1.5 1,949,122 + -0.9 1,949,123 - -0.8 1,949,126 + -0.4 1,949,126 + -0.0 1,949,154 + -1.2 1,949,154 + -0.9 1,949,155 - -1.9 1,949,166 - +2.0 1,949,204 + -2.1 1,949,213 - -0.4 1,949,218 + +0.2 1,949,220 + +0.4 1,949,269 + -0.1 1,949,283 + -1.1 1,949,284 - +0.7 1,949,284 - -0.5 1,949,285 + +1.9 1,949,352 - -0.8 1,949,352 - -0.9 1,949,353 + +0.5 1,949,354 - +0.0 1,949,362 - +0.3 1,949,362 - +0.9 1,949,364 - -0.4 1,949,412 - -0.9 1,949,412 - -0.5 1,949,412 - -0.2 1,949,417 + -0.3 1,949,419 + -0.4 1,949,419 + -0.8 1,949,420 - +1.1 1,949,420 - -0.1 1,949,483 + +0.1 1,949,485 + -0.4 1,949,493 - -0.5 1,949,493 - -0.3 1,949,497 + -1.1 1,949,617 + -1.5 1,949,617 + +0.0 1,949,629 - -1.1 1,949,874 + CA264_08415 0.30 -0.1 1,949,894 - CA264_08415 0.32 -2.1 1,949,907 + CA264_08415 0.34 -0.0 1,949,931 + CA264_08415 0.36 -0.2 1,949,983 + CA264_08415 0.42 -0.1 1,949,985 + CA264_08415 0.43 +0.2 1,950,047 + CA264_08415 0.50 +0.3 1,950,223 - CA264_08415 0.70 +0.5 1,950,460 + -0.2 1,950,460 + -0.9 1,950,482 + -0.4 1,950,482 + -0.2 1,950,482 + -0.2 1,950,483 - +0.6 1,950,483 - -0.8 1,950,483 - -0.8 1,950,486 + -0.4 1,950,595 + +2.1 1,950,606 - +1.0 1,950,609 + -0.5 1,950,609 + +0.5 1,950,610 - -1.5 1,950,620 + +0.1 1,950,647 - CA264_08420 0.11 -0.7 1,950,647 - CA264_08420 0.11 +0.2 1,950,651 - CA264_08420 0.12 +0.1 1,950,677 + CA264_08420 0.15 +2.5 1,950,677 + CA264_08420 0.15 -0.8 1,950,678 - CA264_08420 0.15 -0.0 1,950,680 + CA264_08420 0.15 +1.1 1,950,752 - CA264_08420 0.24 +1.1 1,950,906 + CA264_08420 0.43 -0.5 1,950,907 - CA264_08420 0.43 +0.5 1,950,907 - CA264_08420 0.43 -0.1 1,950,932 + CA264_08420 0.46 -0.3 1,950,932 + CA264_08420 0.46 +0.0 1,951,115 - CA264_08420 0.68 +0.3 1,951,136 - CA264_08420 0.71 -1.1 1,951,220 + CA264_08420 0.81 -0.9 1,951,230 + CA264_08420 0.82 -0.4 1,951,231 - CA264_08420 0.82 -0.7 1,951,237 - CA264_08420 0.83 +1.1 1,951,331 + +0.5 1,951,339 + -0.2 1,951,340 - -1.5 1,951,342 + -1.0 1,951,380 - -1.0 1,951,405 - -2.4 1,951,445 - -1.2
Or see this region's nucleotide sequence