Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05725 and CA264_05730 are separated by 2 nucleotides CA264_05730 and CA264_05735 are separated by 13 nucleotides CA264_05735 and CA264_05740 are separated by 78 nucleotides
CA264_05725: CA264_05725 - TonB-dependent receptor, at 1,331,899 to 1,334,253
_05725
CA264_05730: CA264_05730 - hypothetical protein, at 1,334,256 to 1,335,191
_05730
CA264_05735: CA264_05735 - ion transporter, at 1,335,205 to 1,336,032
_05735
CA264_05740: CA264_05740 - DUF389 domain-containing protein, at 1,336,111 to 1,337,511
_05740
Position (kb)
1335
1336
1337 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1334.242 kb on - strand at 1334.242 kb on - strand at 1334.255 kb on + strand at 1334.256 kb on - strand at 1334.372 kb on + strand, within CA264_05730 at 1334.373 kb on - strand, within CA264_05730 at 1334.480 kb on - strand, within CA264_05730 at 1334.480 kb on - strand, within CA264_05730 at 1334.507 kb on + strand, within CA264_05730 at 1334.549 kb on + strand, within CA264_05730 at 1334.744 kb on - strand, within CA264_05730 at 1334.838 kb on + strand, within CA264_05730 at 1334.839 kb on - strand, within CA264_05730 at 1334.989 kb on - strand, within CA264_05730 at 1335.108 kb on - strand at 1335.113 kb on + strand at 1335.164 kb on + strand at 1335.244 kb on - strand at 1335.244 kb on - strand at 1335.251 kb on + strand at 1335.364 kb on + strand, within CA264_05735 at 1335.364 kb on + strand, within CA264_05735 at 1335.364 kb on + strand, within CA264_05735 at 1335.364 kb on + strand, within CA264_05735 at 1335.364 kb on + strand, within CA264_05735 at 1335.365 kb on - strand, within CA264_05735 at 1335.365 kb on - strand, within CA264_05735 at 1335.365 kb on - strand, within CA264_05735 at 1335.365 kb on - strand, within CA264_05735 at 1335.365 kb on - strand, within CA264_05735 at 1335.366 kb on + strand, within CA264_05735 at 1335.367 kb on - strand, within CA264_05735 at 1335.430 kb on + strand, within CA264_05735 at 1335.431 kb on - strand, within CA264_05735 at 1335.473 kb on + strand, within CA264_05735 at 1335.525 kb on - strand, within CA264_05735 at 1335.595 kb on - strand, within CA264_05735 at 1335.595 kb on - strand, within CA264_05735 at 1335.691 kb on + strand, within CA264_05735 at 1335.699 kb on - strand, within CA264_05735 at 1335.713 kb on - strand, within CA264_05735 at 1335.780 kb on - strand, within CA264_05735 at 1335.803 kb on + strand, within CA264_05735 at 1335.818 kb on + strand, within CA264_05735 at 1335.886 kb on + strand, within CA264_05735 at 1335.887 kb on - strand, within CA264_05735 at 1335.946 kb on + strand, within CA264_05735 at 1335.946 kb on + strand, within CA264_05735 at 1335.947 kb on - strand, within CA264_05735 at 1335.947 kb on - strand, within CA264_05735 at 1335.947 kb on - strand, within CA264_05735 at 1335.990 kb on + strand at 1336.026 kb on + strand at 1336.043 kb on + strand at 1336.043 kb on + strand at 1336.067 kb on + strand at 1336.113 kb on - strand at 1336.126 kb on + strand at 1336.127 kb on - strand at 1336.339 kb on + strand, within CA264_05740 at 1336.339 kb on + strand, within CA264_05740 at 1336.506 kb on - strand, within CA264_05740 at 1336.599 kb on - strand, within CA264_05740 at 1336.599 kb on - strand, within CA264_05740 at 1336.641 kb on - strand, within CA264_05740 at 1336.643 kb on - strand, within CA264_05740 at 1336.687 kb on + strand, within CA264_05740 at 1336.723 kb on - strand, within CA264_05740 at 1336.727 kb on - strand, within CA264_05740 at 1336.727 kb on - strand, within CA264_05740 at 1336.759 kb on + strand, within CA264_05740 at 1336.760 kb on - strand, within CA264_05740 at 1336.763 kb on + strand, within CA264_05740 at 1336.763 kb on + strand, within CA264_05740 at 1336.763 kb on + strand, within CA264_05740 at 1336.772 kb on + strand, within CA264_05740 at 1336.772 kb on + strand, within CA264_05740 at 1336.773 kb on - strand, within CA264_05740 at 1336.801 kb on + strand, within CA264_05740 at 1336.808 kb on - strand, within CA264_05740 at 1336.859 kb on + strand, within CA264_05740 at 1336.899 kb on - strand, within CA264_05740 at 1336.915 kb on - strand, within CA264_05740 at 1336.973 kb on - strand, within CA264_05740 at 1337.030 kb on - strand, within CA264_05740
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,334,242 - +0.3 1,334,242 - -0.4 1,334,255 + +0.1 1,334,256 - +0.3 1,334,372 + CA264_05730 0.12 +0.1 1,334,373 - CA264_05730 0.12 -1.2 1,334,480 - CA264_05730 0.24 +0.1 1,334,480 - CA264_05730 0.24 -2.2 1,334,507 + CA264_05730 0.27 +0.7 1,334,549 + CA264_05730 0.31 -1.5 1,334,744 - CA264_05730 0.52 -0.1 1,334,838 + CA264_05730 0.62 -0.9 1,334,839 - CA264_05730 0.62 -0.1 1,334,989 - CA264_05730 0.78 -0.2 1,335,108 - -0.9 1,335,113 + -0.2 1,335,164 + -0.8 1,335,244 - +0.1 1,335,244 - -1.7 1,335,251 + -1.6 1,335,364 + CA264_05735 0.19 -1.8 1,335,364 + CA264_05735 0.19 -0.2 1,335,364 + CA264_05735 0.19 -0.2 1,335,364 + CA264_05735 0.19 -0.3 1,335,364 + CA264_05735 0.19 +0.1 1,335,365 - CA264_05735 0.19 +0.4 1,335,365 - CA264_05735 0.19 -1.0 1,335,365 - CA264_05735 0.19 -0.4 1,335,365 - CA264_05735 0.19 +0.1 1,335,365 - CA264_05735 0.19 +0.2 1,335,366 + CA264_05735 0.19 -0.4 1,335,367 - CA264_05735 0.20 -1.7 1,335,430 + CA264_05735 0.27 -0.9 1,335,431 - CA264_05735 0.27 -0.4 1,335,473 + CA264_05735 0.32 -0.7 1,335,525 - CA264_05735 0.39 +0.0 1,335,595 - CA264_05735 0.47 -1.4 1,335,595 - CA264_05735 0.47 -1.4 1,335,691 + CA264_05735 0.59 +0.5 1,335,699 - CA264_05735 0.60 -1.9 1,335,713 - CA264_05735 0.61 -1.2 1,335,780 - CA264_05735 0.69 +0.6 1,335,803 + CA264_05735 0.72 -0.1 1,335,818 + CA264_05735 0.74 -0.4 1,335,886 + CA264_05735 0.82 +0.3 1,335,887 - CA264_05735 0.82 +0.6 1,335,946 + CA264_05735 0.89 -1.6 1,335,946 + CA264_05735 0.89 -0.2 1,335,947 - CA264_05735 0.90 +0.0 1,335,947 - CA264_05735 0.90 -0.5 1,335,947 - CA264_05735 0.90 -0.7 1,335,990 + +0.1 1,336,026 + -1.5 1,336,043 + -0.2 1,336,043 + -2.2 1,336,067 + -1.1 1,336,113 - -1.0 1,336,126 + -0.7 1,336,127 - +0.7 1,336,339 + CA264_05740 0.16 -0.1 1,336,339 + CA264_05740 0.16 +0.6 1,336,506 - CA264_05740 0.28 +0.0 1,336,599 - CA264_05740 0.35 -2.2 1,336,599 - CA264_05740 0.35 -0.7 1,336,641 - CA264_05740 0.38 +0.4 1,336,643 - CA264_05740 0.38 -1.8 1,336,687 + CA264_05740 0.41 -1.3 1,336,723 - CA264_05740 0.44 -0.5 1,336,727 - CA264_05740 0.44 -0.9 1,336,727 - CA264_05740 0.44 -1.0 1,336,759 + CA264_05740 0.46 +1.1 1,336,760 - CA264_05740 0.46 +1.1 1,336,763 + CA264_05740 0.47 -0.3 1,336,763 + CA264_05740 0.47 -1.1 1,336,763 + CA264_05740 0.47 +0.0 1,336,772 + CA264_05740 0.47 -1.2 1,336,772 + CA264_05740 0.47 -1.6 1,336,773 - CA264_05740 0.47 -1.8 1,336,801 + CA264_05740 0.49 -0.9 1,336,808 - CA264_05740 0.50 -0.9 1,336,859 + CA264_05740 0.53 -0.6 1,336,899 - CA264_05740 0.56 -0.1 1,336,915 - CA264_05740 0.57 -1.7 1,336,973 - CA264_05740 0.62 +1.9 1,337,030 - CA264_05740 0.66 -0.2
Or see this region's nucleotide sequence