Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05560 and CA264_05565 are separated by 562 nucleotides CA264_05565 and CA264_05570 are separated by 54 nucleotides CA264_05570 and CA264_05575 are separated by 132 nucleotides
CA264_05560: CA264_05560 - hypothetical protein, at 1,294,564 to 1,295,730
_05560
CA264_05565: CA264_05565 - tRNA-Thr, at 1,296,293 to 1,296,365
_05565
CA264_05570: CA264_05570 - tRNA-Thr, at 1,296,420 to 1,296,495
_05570
CA264_05575: CA264_05575 - hypothetical protein, at 1,296,628 to 1,298,721
_05575
Position (kb)
1296
1297 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1295.731 kb on - strand at 1295.735 kb on + strand at 1295.756 kb on - strand at 1295.767 kb on - strand at 1295.786 kb on + strand at 1295.798 kb on + strand at 1295.821 kb on + strand at 1295.821 kb on + strand at 1295.823 kb on + strand at 1295.823 kb on + strand at 1295.824 kb on - strand at 1295.827 kb on - strand at 1295.827 kb on - strand at 1295.839 kb on + strand at 1295.840 kb on - strand at 1295.845 kb on + strand at 1295.846 kb on - strand at 1295.857 kb on + strand at 1295.857 kb on + strand at 1295.858 kb on - strand at 1295.858 kb on - strand at 1295.922 kb on - strand at 1295.922 kb on - strand at 1295.924 kb on - strand at 1295.924 kb on - strand at 1296.088 kb on - strand at 1296.120 kb on + strand at 1296.121 kb on - strand at 1296.121 kb on - strand at 1296.127 kb on + strand at 1296.127 kb on + strand at 1296.128 kb on - strand at 1296.133 kb on - strand at 1296.149 kb on + strand at 1296.149 kb on + strand at 1296.167 kb on - strand at 1296.168 kb on + strand at 1296.168 kb on + strand at 1296.169 kb on - strand at 1296.200 kb on - strand at 1296.200 kb on - strand at 1296.289 kb on + strand at 1296.329 kb on + strand, within CA264_05565 at 1296.400 kb on - strand at 1296.400 kb on - strand at 1296.595 kb on - strand at 1296.595 kb on - strand at 1296.828 kb on + strand at 1296.853 kb on - strand, within CA264_05575 at 1296.946 kb on - strand, within CA264_05575 at 1296.946 kb on - strand, within CA264_05575 at 1296.952 kb on - strand, within CA264_05575 at 1296.978 kb on + strand, within CA264_05575 at 1296.978 kb on + strand, within CA264_05575 at 1297.253 kb on - strand, within CA264_05575 at 1297.400 kb on + strand, within CA264_05575 at 1297.400 kb on + strand, within CA264_05575 at 1297.401 kb on - strand, within CA264_05575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,295,731 - -1.6 1,295,735 + -0.2 1,295,756 - +0.3 1,295,767 - -0.9 1,295,786 + -0.9 1,295,798 + -0.6 1,295,821 + -1.5 1,295,821 + +0.8 1,295,823 + -1.1 1,295,823 + +0.3 1,295,824 - -0.3 1,295,827 - +1.0 1,295,827 - +0.6 1,295,839 + -0.8 1,295,840 - -0.4 1,295,845 + +0.6 1,295,846 - -0.9 1,295,857 + +0.1 1,295,857 + -0.2 1,295,858 - +1.4 1,295,858 - -2.7 1,295,922 - -0.2 1,295,922 - -1.2 1,295,924 - -1.1 1,295,924 - +0.2 1,296,088 - +0.1 1,296,120 + -0.4 1,296,121 - +1.6 1,296,121 - -0.4 1,296,127 + -0.8 1,296,127 + -1.7 1,296,128 - +0.6 1,296,133 - +2.0 1,296,149 + +1.2 1,296,149 + -0.5 1,296,167 - +0.1 1,296,168 + -0.3 1,296,168 + +0.8 1,296,169 - -1.6 1,296,200 - -0.6 1,296,200 - -0.4 1,296,289 + -1.0 1,296,329 + CA264_05565 0.49 -0.0 1,296,400 - -0.3 1,296,400 - -0.0 1,296,595 - -0.5 1,296,595 - +0.4 1,296,828 + +1.0 1,296,853 - CA264_05575 0.11 -2.4 1,296,946 - CA264_05575 0.15 -0.2 1,296,946 - CA264_05575 0.15 -1.0 1,296,952 - CA264_05575 0.15 -2.1 1,296,978 + CA264_05575 0.17 +0.9 1,296,978 + CA264_05575 0.17 -1.2 1,297,253 - CA264_05575 0.30 -1.0 1,297,400 + CA264_05575 0.37 -0.7 1,297,400 + CA264_05575 0.37 -0.5 1,297,401 - CA264_05575 0.37 -0.6
Or see this region's nucleotide sequence