Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04115 and CA264_04120 are separated by 302 nucleotides CA264_04120 and CA264_04125 are separated by 188 nucleotides CA264_04125 and CA264_04130 are separated by 935 nucleotides
CA264_04115: CA264_04115 - hypothetical protein, at 953,899 to 954,834
_04115
CA264_04120: CA264_04120 - hypothetical protein, at 955,137 to 955,421
_04120
CA264_04125: CA264_04125 - hypothetical protein, at 955,610 to 955,945
_04125
CA264_04130: CA264_04130 - hypothetical protein, at 956,881 to 957,735
_04130
Position (kb)
955
956 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 954.684 kb on + strand, within CA264_04115 at 954.717 kb on + strand, within CA264_04115 at 954.718 kb on - strand, within CA264_04115 at 954.718 kb on - strand, within CA264_04115 at 954.720 kb on + strand, within CA264_04115 at 954.721 kb on - strand, within CA264_04115 at 954.721 kb on - strand, within CA264_04115 at 954.832 kb on + strand at 954.833 kb on - strand at 954.833 kb on - strand at 954.872 kb on - strand at 954.874 kb on - strand at 954.877 kb on + strand at 954.877 kb on + strand at 954.878 kb on - strand at 954.898 kb on + strand at 954.899 kb on - strand at 954.899 kb on - strand at 954.899 kb on - strand at 954.902 kb on - strand at 954.970 kb on + strand at 954.989 kb on + strand at 954.996 kb on - strand at 954.996 kb on - strand at 954.996 kb on - strand at 954.997 kb on + strand at 954.997 kb on + strand at 954.997 kb on + strand at 955.007 kb on + strand at 955.132 kb on + strand at 955.133 kb on - strand at 955.164 kb on - strand at 955.165 kb on + strand at 955.166 kb on - strand at 955.166 kb on - strand, within CA264_04120 at 955.166 kb on - strand, within CA264_04120 at 955.166 kb on - strand, within CA264_04120 at 955.169 kb on + strand, within CA264_04120 at 955.169 kb on + strand, within CA264_04120 at 955.170 kb on - strand, within CA264_04120 at 955.170 kb on - strand, within CA264_04120 at 955.170 kb on - strand, within CA264_04120 at 955.377 kb on - strand, within CA264_04120 at 955.377 kb on - strand, within CA264_04120 at 955.398 kb on + strand at 955.449 kb on + strand at 955.487 kb on + strand at 955.487 kb on + strand at 955.487 kb on + strand at 955.488 kb on - strand at 955.488 kb on - strand at 955.488 kb on - strand at 955.488 kb on - strand at 955.492 kb on - strand at 955.492 kb on - strand at 955.494 kb on - strand at 955.579 kb on - strand at 955.579 kb on - strand at 955.588 kb on + strand at 955.619 kb on - strand at 955.642 kb on - strand at 955.688 kb on - strand, within CA264_04125 at 955.733 kb on + strand, within CA264_04125 at 955.801 kb on + strand, within CA264_04125 at 955.801 kb on + strand, within CA264_04125 at 955.808 kb on - strand, within CA264_04125 at 955.814 kb on + strand, within CA264_04125 at 955.943 kb on + strand at 955.944 kb on - strand at 955.944 kb on - strand at 955.989 kb on + strand at 956.024 kb on + strand at 956.025 kb on - strand at 956.101 kb on + strand at 956.102 kb on - strand at 956.105 kb on + strand at 956.105 kb on + strand at 956.123 kb on + strand at 956.123 kb on + strand at 956.123 kb on + strand at 956.123 kb on + strand at 956.124 kb on - strand at 956.124 kb on - strand at 956.168 kb on - strand at 956.173 kb on + strand at 956.173 kb on + strand at 956.174 kb on - strand at 956.174 kb on - strand at 956.174 kb on - strand at 956.191 kb on + strand at 956.191 kb on + strand at 956.192 kb on - strand at 956.219 kb on + strand at 956.240 kb on - strand at 956.345 kb on + strand at 956.422 kb on + strand at 956.423 kb on - strand at 956.496 kb on - strand at 956.504 kb on - strand at 956.507 kb on - strand at 956.520 kb on - strand at 956.527 kb on - strand at 956.527 kb on - strand at 956.573 kb on - strand at 956.625 kb on + strand at 956.625 kb on + strand at 956.625 kb on + strand at 956.625 kb on + strand at 956.626 kb on - strand at 956.626 kb on - strand at 956.627 kb on + strand at 956.627 kb on + strand at 956.627 kb on + strand at 956.628 kb on - strand at 956.628 kb on - strand at 956.628 kb on - strand at 956.668 kb on + strand at 956.693 kb on + strand at 956.698 kb on - strand at 956.698 kb on - strand at 956.715 kb on + strand at 956.715 kb on + strand at 956.716 kb on - strand at 956.721 kb on + strand at 956.770 kb on - strand at 956.770 kb on - strand at 956.852 kb on + strand at 956.858 kb on + strand at 956.922 kb on + strand at 956.929 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 954,684 + CA264_04115 0.84 +0.3 954,717 + CA264_04115 0.87 -1.4 954,718 - CA264_04115 0.88 +0.1 954,718 - CA264_04115 0.88 -1.7 954,720 + CA264_04115 0.88 +0.7 954,721 - CA264_04115 0.88 -0.3 954,721 - CA264_04115 0.88 -0.9 954,832 + +0.8 954,833 - -0.9 954,833 - +0.1 954,872 - -1.1 954,874 - -0.4 954,877 + -0.5 954,877 + -0.2 954,878 - +0.1 954,898 + -0.5 954,899 - -0.4 954,899 - -0.8 954,899 - -0.3 954,902 - +2.0 954,970 + -2.7 954,989 + +0.9 954,996 - -0.6 954,996 - +0.0 954,996 - -0.6 954,997 + +0.8 954,997 + -0.8 954,997 + -0.8 955,007 + -2.1 955,132 + -0.4 955,133 - -0.5 955,164 - -2.2 955,165 + -0.8 955,166 - +1.2 955,166 - CA264_04120 0.10 -1.4 955,166 - CA264_04120 0.10 -0.5 955,166 - CA264_04120 0.10 -0.6 955,169 + CA264_04120 0.11 -1.5 955,169 + CA264_04120 0.11 +0.8 955,170 - CA264_04120 0.12 +0.2 955,170 - CA264_04120 0.12 +0.2 955,170 - CA264_04120 0.12 +1.1 955,377 - CA264_04120 0.84 -0.3 955,377 - CA264_04120 0.84 -0.1 955,398 + -0.3 955,449 + -0.3 955,487 + +0.1 955,487 + -0.8 955,487 + -0.3 955,488 - -1.1 955,488 - -0.6 955,488 - -1.1 955,488 - -0.8 955,492 - -0.3 955,492 - -0.6 955,494 - +0.1 955,579 - -0.1 955,579 - -1.3 955,588 + +0.3 955,619 - -0.4 955,642 - -0.9 955,688 - CA264_04125 0.23 +1.4 955,733 + CA264_04125 0.37 +0.2 955,801 + CA264_04125 0.57 -0.9 955,801 + CA264_04125 0.57 +1.1 955,808 - CA264_04125 0.59 +0.7 955,814 + CA264_04125 0.61 -0.1 955,943 + -1.0 955,944 - +0.1 955,944 - -0.1 955,989 + +2.0 956,024 + -0.9 956,025 - -2.9 956,101 + -0.0 956,102 - +0.2 956,105 + -0.5 956,105 + +1.2 956,123 + -0.2 956,123 + +2.6 956,123 + +0.5 956,123 + +0.6 956,124 - +0.4 956,124 - +1.7 956,168 - -0.5 956,173 + -0.6 956,173 + -1.4 956,174 - -1.0 956,174 - -0.8 956,174 - +0.9 956,191 + +2.2 956,191 + -0.3 956,192 - -1.6 956,219 + -0.2 956,240 - -0.2 956,345 + -0.8 956,422 + -0.5 956,423 - -1.1 956,496 - +0.1 956,504 - -0.8 956,507 - +0.7 956,520 - -1.0 956,527 - +0.2 956,527 - -0.7 956,573 - -0.3 956,625 + -0.4 956,625 + +0.1 956,625 + -2.3 956,625 + +0.4 956,626 - +0.7 956,626 - -1.8 956,627 + -1.4 956,627 + -0.7 956,627 + -0.8 956,628 - +1.4 956,628 - -0.0 956,628 - -0.8 956,668 + -0.2 956,693 + -0.8 956,698 - -0.1 956,698 - -0.1 956,715 + -2.6 956,715 + -0.4 956,716 - +0.0 956,721 + +2.1 956,770 - -0.7 956,770 - -1.1 956,852 + -0.6 956,858 + -1.2 956,922 + -0.6 956,929 + -1.0
Or see this region's nucleotide sequence