Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03645 and CA264_03650 are separated by 20 nucleotides CA264_03650 and CA264_03655 are separated by 25 nucleotides
CA264_03645: CA264_03645 - hypothetical protein, at 849,618 to 850,949
_03645
CA264_03650: CA264_03650 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit, at 850,970 to 852,118
_03650
CA264_03655: CA264_03655 - multidrug efflux RND transporter permease subunit, at 852,144 to 855,338
_03655
Position (kb)
850
851
852
853 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 850.058 kb on - strand, within CA264_03645 at 850.146 kb on + strand, within CA264_03645 at 850.167 kb on + strand, within CA264_03645 at 850.167 kb on + strand, within CA264_03645 at 850.168 kb on - strand, within CA264_03645 at 850.168 kb on - strand, within CA264_03645 at 850.183 kb on + strand, within CA264_03645 at 850.278 kb on + strand, within CA264_03645 at 850.363 kb on + strand, within CA264_03645 at 850.363 kb on + strand, within CA264_03645 at 850.489 kb on - strand, within CA264_03645 at 850.498 kb on - strand, within CA264_03645 at 850.509 kb on + strand, within CA264_03645 at 850.509 kb on + strand, within CA264_03645 at 850.537 kb on - strand, within CA264_03645 at 850.609 kb on - strand at 850.660 kb on + strand, within CA264_03645 at 850.661 kb on - strand, within CA264_03645 at 850.715 kb on + strand, within CA264_03645 at 850.725 kb on + strand, within CA264_03645 at 850.725 kb on + strand, within CA264_03645 at 850.776 kb on + strand, within CA264_03645 at 850.777 kb on - strand, within CA264_03645 at 850.818 kb on + strand at 850.819 kb on - strand at 850.870 kb on - strand at 850.872 kb on + strand at 850.872 kb on + strand at 850.873 kb on - strand at 850.933 kb on + strand at 850.933 kb on + strand at 850.963 kb on - strand at 850.979 kb on - strand at 850.982 kb on + strand at 851.018 kb on - strand at 851.020 kb on - strand at 851.131 kb on + strand, within CA264_03650 at 851.131 kb on + strand, within CA264_03650 at 851.131 kb on + strand, within CA264_03650 at 851.207 kb on + strand, within CA264_03650 at 851.271 kb on - strand, within CA264_03650 at 851.397 kb on + strand, within CA264_03650 at 851.398 kb on - strand, within CA264_03650 at 851.398 kb on - strand, within CA264_03650 at 851.402 kb on + strand, within CA264_03650 at 851.402 kb on + strand, within CA264_03650 at 851.621 kb on - strand, within CA264_03650 at 851.647 kb on - strand, within CA264_03650 at 851.712 kb on - strand, within CA264_03650 at 851.773 kb on + strand, within CA264_03650 at 851.774 kb on - strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.922 kb on + strand, within CA264_03650 at 851.922 kb on + strand, within CA264_03650 at 852.025 kb on - strand at 852.035 kb on - strand at 852.157 kb on + strand at 852.161 kb on + strand at 852.163 kb on + strand at 852.182 kb on + strand at 852.184 kb on + strand at 852.194 kb on + strand at 852.195 kb on - strand at 852.195 kb on - strand at 852.196 kb on + strand at 852.196 kb on + strand at 852.196 kb on + strand at 852.196 kb on + strand at 852.225 kb on - strand at 852.257 kb on + strand at 852.291 kb on + strand at 852.292 kb on - strand at 852.292 kb on - strand at 852.294 kb on - strand at 852.375 kb on + strand at 852.375 kb on + strand at 852.376 kb on - strand at 852.376 kb on - strand at 852.380 kb on + strand at 852.380 kb on + strand at 852.386 kb on + strand at 852.387 kb on - strand at 852.511 kb on + strand, within CA264_03655 at 852.616 kb on - strand, within CA264_03655 at 852.616 kb on - strand, within CA264_03655 at 852.627 kb on + strand, within CA264_03655 at 852.627 kb on + strand, within CA264_03655 at 852.627 kb on + strand, within CA264_03655 at 852.628 kb on - strand, within CA264_03655 at 852.628 kb on - strand, within CA264_03655 at 852.628 kb on - strand, within CA264_03655 at 852.719 kb on + strand, within CA264_03655 at 852.733 kb on - strand, within CA264_03655 at 852.756 kb on - strand, within CA264_03655 at 852.756 kb on - strand, within CA264_03655 at 852.894 kb on - strand, within CA264_03655 at 852.930 kb on + strand, within CA264_03655 at 852.930 kb on + strand, within CA264_03655 at 852.972 kb on + strand, within CA264_03655 at 853.064 kb on + strand, within CA264_03655 at 853.068 kb on + strand, within CA264_03655 at 853.068 kb on + strand, within CA264_03655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 850,058 - CA264_03645 0.33 -0.6 850,146 + CA264_03645 0.40 +0.5 850,167 + CA264_03645 0.41 -1.0 850,167 + CA264_03645 0.41 -0.8 850,168 - CA264_03645 0.41 -1.5 850,168 - CA264_03645 0.41 -0.0 850,183 + CA264_03645 0.42 +1.2 850,278 + CA264_03645 0.50 -0.6 850,363 + CA264_03645 0.56 -1.2 850,363 + CA264_03645 0.56 -1.6 850,489 - CA264_03645 0.65 -0.3 850,498 - CA264_03645 0.66 -0.7 850,509 + CA264_03645 0.67 +1.0 850,509 + CA264_03645 0.67 -0.3 850,537 - CA264_03645 0.69 +1.6 850,609 - +0.8 850,660 + CA264_03645 0.78 +0.3 850,661 - CA264_03645 0.78 -0.8 850,715 + CA264_03645 0.82 -0.7 850,725 + CA264_03645 0.83 -0.2 850,725 + CA264_03645 0.83 -0.9 850,776 + CA264_03645 0.87 -0.5 850,777 - CA264_03645 0.87 -0.0 850,818 + -1.0 850,819 - -1.0 850,870 - -0.2 850,872 + -1.4 850,872 + -1.1 850,873 - -1.3 850,933 + -0.0 850,933 + -0.2 850,963 - -1.3 850,979 - -1.6 850,982 + -1.4 851,018 - -1.2 851,020 - -1.3 851,131 + CA264_03650 0.14 +0.3 851,131 + CA264_03650 0.14 -1.1 851,131 + CA264_03650 0.14 -0.6 851,207 + CA264_03650 0.21 -1.5 851,271 - CA264_03650 0.26 -2.3 851,397 + CA264_03650 0.37 -0.0 851,398 - CA264_03650 0.37 -1.3 851,398 - CA264_03650 0.37 -1.2 851,402 + CA264_03650 0.38 -1.4 851,402 + CA264_03650 0.38 -0.1 851,621 - CA264_03650 0.57 -1.0 851,647 - CA264_03650 0.59 -1.1 851,712 - CA264_03650 0.65 -1.1 851,773 + CA264_03650 0.70 -0.8 851,774 - CA264_03650 0.70 -2.4 851,912 + CA264_03650 0.82 -2.3 851,912 + CA264_03650 0.82 -0.7 851,912 + CA264_03650 0.82 -0.4 851,912 + CA264_03650 0.82 -0.5 851,912 + CA264_03650 0.82 -1.5 851,913 - CA264_03650 0.82 -2.6 851,913 - CA264_03650 0.82 -2.8 851,913 - CA264_03650 0.82 -1.0 851,913 - CA264_03650 0.82 -1.5 851,913 - CA264_03650 0.82 +0.8 851,918 + CA264_03650 0.83 -0.6 851,918 + CA264_03650 0.83 -0.2 851,918 + CA264_03650 0.83 +0.6 851,919 - CA264_03650 0.83 -1.4 851,919 - CA264_03650 0.83 -1.2 851,919 - CA264_03650 0.83 -0.0 851,919 - CA264_03650 0.83 -2.3 851,919 - CA264_03650 0.83 -0.4 851,922 + CA264_03650 0.83 -1.8 851,922 + CA264_03650 0.83 -2.2 852,025 - +0.3 852,035 - +0.3 852,157 + -1.8 852,161 + -1.8 852,163 + -0.2 852,182 + -2.1 852,184 + -0.4 852,194 + -2.8 852,195 - -1.9 852,195 - +0.3 852,196 + -1.2 852,196 + -2.6 852,196 + +0.0 852,196 + -0.5 852,225 - -1.0 852,257 + -2.7 852,291 + +0.2 852,292 - +0.6 852,292 - -0.2 852,294 - -1.3 852,375 + -0.8 852,375 + -0.5 852,376 - +0.2 852,376 - -2.1 852,380 + -1.4 852,380 + -0.4 852,386 + -2.5 852,387 - -1.9 852,511 + CA264_03655 0.11 -1.3 852,616 - CA264_03655 0.15 -1.2 852,616 - CA264_03655 0.15 -1.7 852,627 + CA264_03655 0.15 -0.4 852,627 + CA264_03655 0.15 -0.0 852,627 + CA264_03655 0.15 -2.4 852,628 - CA264_03655 0.15 -3.6 852,628 - CA264_03655 0.15 -1.6 852,628 - CA264_03655 0.15 +0.5 852,719 + CA264_03655 0.18 +0.6 852,733 - CA264_03655 0.18 -0.5 852,756 - CA264_03655 0.19 -2.2 852,756 - CA264_03655 0.19 -1.1 852,894 - CA264_03655 0.23 +0.2 852,930 + CA264_03655 0.25 -1.1 852,930 + CA264_03655 0.25 -1.0 852,972 + CA264_03655 0.26 -1.6 853,064 + CA264_03655 0.29 -2.7 853,068 + CA264_03655 0.29 +1.2 853,068 + CA264_03655 0.29 -2.1
Or see this region's nucleotide sequence