Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02430 and CA264_02435 are separated by 338 nucleotides CA264_02435 and CA264_02440 are separated by 186 nucleotides
CA264_02430: CA264_02430 - glucoamylase, at 565,986 to 567,818
_02430
CA264_02435: CA264_02435 - hypothetical protein, at 568,157 to 568,807
_02435
CA264_02440: CA264_02440 - vitamin K epoxide reductase, at 568,994 to 570,556
_02440
Position (kb) 568
569 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 567.195 kb on - strand, within CA264_02430 at 567.220 kb on + strand, within CA264_02430 at 567.220 kb on + strand, within CA264_02430 at 567.221 kb on - strand, within CA264_02430 at 567.221 kb on - strand, within CA264_02430 at 567.221 kb on - strand, within CA264_02430 at 567.614 kb on - strand, within CA264_02430 at 567.623 kb on + strand, within CA264_02430 at 567.625 kb on + strand, within CA264_02430 at 567.767 kb on + strand at 567.767 kb on + strand at 567.791 kb on - strand at 567.809 kb on - strand at 567.809 kb on - strand at 567.821 kb on + strand at 567.823 kb on + strand at 567.868 kb on + strand at 567.869 kb on - strand at 568.067 kb on + strand at 568.075 kb on + strand at 568.076 kb on - strand at 568.148 kb on + strand at 568.200 kb on + strand at 568.204 kb on - strand at 568.378 kb on + strand, within CA264_02435 at 568.391 kb on - strand, within CA264_02435 at 568.484 kb on + strand, within CA264_02435 at 568.484 kb on + strand, within CA264_02435 at 568.486 kb on + strand, within CA264_02435 at 568.486 kb on + strand, within CA264_02435 at 568.486 kb on + strand, within CA264_02435 at 568.487 kb on - strand, within CA264_02435 at 568.543 kb on + strand, within CA264_02435 at 568.590 kb on + strand, within CA264_02435 at 568.631 kb on + strand, within CA264_02435 at 568.638 kb on - strand, within CA264_02435 at 568.755 kb on - strand at 568.790 kb on + strand at 568.790 kb on + strand at 568.799 kb on - strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.808 kb on - strand at 568.808 kb on - strand at 568.808 kb on - strand at 568.810 kb on + strand at 568.811 kb on - strand at 568.844 kb on + strand at 568.888 kb on + strand at 568.889 kb on - strand at 568.889 kb on - strand at 568.895 kb on + strand at 568.944 kb on + strand at 568.944 kb on + strand at 568.945 kb on - strand at 568.947 kb on - strand at 568.953 kb on - strand at 568.953 kb on - strand at 568.962 kb on - strand at 568.990 kb on - strand at 568.990 kb on - strand at 568.990 kb on - strand at 569.053 kb on + strand at 569.074 kb on + strand at 569.075 kb on - strand at 569.140 kb on + strand at 569.310 kb on + strand, within CA264_02440 at 569.529 kb on + strand, within CA264_02440 at 569.615 kb on + strand, within CA264_02440 at 569.615 kb on + strand, within CA264_02440 at 569.616 kb on - strand, within CA264_02440 at 569.711 kb on + strand, within CA264_02440
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 567,195 - CA264_02430 0.66 -0.7 567,220 + CA264_02430 0.67 +0.5 567,220 + CA264_02430 0.67 -1.1 567,221 - CA264_02430 0.67 +1.6 567,221 - CA264_02430 0.67 -0.1 567,221 - CA264_02430 0.67 -0.9 567,614 - CA264_02430 0.89 +0.2 567,623 + CA264_02430 0.89 -0.3 567,625 + CA264_02430 0.89 -0.5 567,767 + -0.1 567,767 + -0.4 567,791 - +0.1 567,809 - -1.2 567,809 - -0.2 567,821 + -0.4 567,823 + -0.8 567,868 + -0.3 567,869 - -0.3 568,067 + -1.3 568,075 + -0.7 568,076 - -0.0 568,148 + +0.7 568,200 + -0.4 568,204 - -2.2 568,378 + CA264_02435 0.34 -0.7 568,391 - CA264_02435 0.36 -0.4 568,484 + CA264_02435 0.50 -1.1 568,484 + CA264_02435 0.50 -1.7 568,486 + CA264_02435 0.51 -2.3 568,486 + CA264_02435 0.51 -3.2 568,486 + CA264_02435 0.51 -1.4 568,487 - CA264_02435 0.51 -0.5 568,543 + CA264_02435 0.59 -0.5 568,590 + CA264_02435 0.67 -0.4 568,631 + CA264_02435 0.73 +0.1 568,638 - CA264_02435 0.74 -1.3 568,755 - +0.0 568,790 + -0.3 568,790 + -0.4 568,799 - -0.7 568,807 + -0.7 568,807 + -0.1 568,807 + -0.2 568,807 + -0.0 568,807 + -0.4 568,807 + -2.0 568,807 + -2.0 568,807 + -0.8 568,807 + -0.4 568,808 - +0.5 568,808 - -0.6 568,808 - -0.7 568,810 + +0.3 568,811 - -0.3 568,844 + -0.1 568,888 + +0.1 568,889 - -1.5 568,889 - -0.3 568,895 + +0.3 568,944 + +0.1 568,944 + -2.1 568,945 - -0.4 568,947 - -0.3 568,953 - -0.5 568,953 - -0.2 568,962 - -1.1 568,990 - -0.4 568,990 - +0.7 568,990 - +0.3 569,053 + -1.3 569,074 + -0.8 569,075 - -0.2 569,140 + +0.8 569,310 + CA264_02440 0.20 +0.5 569,529 + CA264_02440 0.34 -1.2 569,615 + CA264_02440 0.40 -0.1 569,615 + CA264_02440 0.40 -0.6 569,616 - CA264_02440 0.40 -2.5 569,711 + CA264_02440 0.46 -0.9
Or see this region's nucleotide sequence