Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01900 and CA264_01905 are separated by 470 nucleotides CA264_01905 and CA264_01910 are separated by 227 nucleotides
CA264_01900: CA264_01900 - hypothetical protein, at 442,590 to 443,381
_01900
CA264_01905: CA264_01905 - cystathionine beta-synthase, at 443,852 to 445,696
_01905
CA264_01910: CA264_01910 - transposase, at 445,924 to 446,472
_01910
Position (kb) 443
444
445
446 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 442.871 kb on + strand, within CA264_01900 at 442.872 kb on - strand, within CA264_01900 at 443.061 kb on - strand, within CA264_01900 at 443.062 kb on + strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.141 kb on + strand, within CA264_01900 at 443.242 kb on + strand, within CA264_01900 at 443.261 kb on - strand, within CA264_01900 at 443.324 kb on - strand at 443.377 kb on + strand at 443.377 kb on + strand at 443.443 kb on + strand at 443.444 kb on - strand at 443.473 kb on - strand at 443.536 kb on - strand at 443.542 kb on - strand at 443.542 kb on - strand at 443.581 kb on + strand at 443.582 kb on - strand at 443.619 kb on + strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.631 kb on + strand at 443.656 kb on + strand at 443.665 kb on - strand at 443.668 kb on + strand at 443.668 kb on + strand at 443.669 kb on - strand at 443.669 kb on - strand at 443.679 kb on - strand at 443.709 kb on + strand at 443.710 kb on - strand at 443.821 kb on + strand at 443.848 kb on + strand at 443.852 kb on - strand at 443.852 kb on - strand at 443.941 kb on + strand at 444.053 kb on + strand, within CA264_01905 at 444.055 kb on + strand, within CA264_01905 at 444.064 kb on - strand, within CA264_01905 at 444.191 kb on - strand, within CA264_01905 at 444.218 kb on - strand, within CA264_01905 at 444.267 kb on - strand, within CA264_01905 at 444.267 kb on - strand, within CA264_01905 at 444.314 kb on - strand, within CA264_01905 at 444.361 kb on - strand, within CA264_01905 at 444.435 kb on + strand, within CA264_01905 at 444.499 kb on - strand, within CA264_01905 at 444.604 kb on - strand, within CA264_01905 at 444.604 kb on - strand, within CA264_01905 at 444.645 kb on + strand, within CA264_01905 at 444.667 kb on + strand, within CA264_01905 at 444.860 kb on - strand, within CA264_01905 at 445.027 kb on + strand, within CA264_01905 at 445.030 kb on - strand, within CA264_01905 at 445.274 kb on - strand, within CA264_01905 at 445.298 kb on + strand, within CA264_01905 at 445.457 kb on + strand, within CA264_01905 at 445.524 kb on - strand at 445.567 kb on - strand at 445.695 kb on - strand at 445.710 kb on - strand at 445.715 kb on - strand at 445.731 kb on + strand at 445.732 kb on - strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.760 kb on + strand at 445.761 kb on - strand at 445.761 kb on - strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.853 kb on - strand at 445.863 kb on + strand at 445.901 kb on - strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.911 kb on - strand at 445.939 kb on - strand at 445.941 kb on + strand at 445.942 kb on - strand at 445.967 kb on + strand at 445.985 kb on + strand, within CA264_01910 at 445.985 kb on + strand, within CA264_01910 at 445.986 kb on - strand, within CA264_01910 at 445.989 kb on + strand, within CA264_01910 at 445.990 kb on - strand, within CA264_01910 at 446.041 kb on - strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.077 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.307 kb on + strand, within CA264_01910 at 446.352 kb on + strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.378 kb on + strand, within CA264_01910 at 446.379 kb on - strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.411 kb on - strand, within CA264_01910 at 446.432 kb on + strand at 446.435 kb on - strand at 446.460 kb on - strand at 446.472 kb on + strand at 446.473 kb on - strand at 446.479 kb on + strand at 446.479 kb on + strand at 446.480 kb on - strand at 446.480 kb on - strand at 446.482 kb on + strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.490 kb on - strand at 446.500 kb on + strand at 446.500 kb on + strand at 446.501 kb on - strand at 446.509 kb on - strand at 446.538 kb on + strand at 446.538 kb on + strand at 446.539 kb on - strand at 446.545 kb on + strand at 446.549 kb on + strand at 446.550 kb on - strand at 446.550 kb on - strand at 446.695 kb on - strand at 446.695 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 442,871 + CA264_01900 0.35 +2.2 442,872 - CA264_01900 0.36 -0.4 443,061 - CA264_01900 0.59 -0.6 443,062 + CA264_01900 0.60 +0.3 443,063 - CA264_01900 0.60 -0.5 443,063 - CA264_01900 0.60 -0.4 443,141 + CA264_01900 0.70 +0.5 443,242 + CA264_01900 0.82 -0.5 443,261 - CA264_01900 0.85 +2.4 443,324 - -1.3 443,377 + +2.1 443,377 + -0.5 443,443 + -1.0 443,444 - -1.2 443,473 - -1.1 443,536 - -1.1 443,542 - -0.7 443,542 - -0.8 443,581 + -1.1 443,582 - -1.4 443,619 + -1.6 443,620 - -0.4 443,620 - -0.7 443,620 - -0.8 443,620 - +0.5 443,631 + -1.3 443,656 + -0.7 443,665 - +0.6 443,668 + -0.4 443,668 + +0.3 443,669 - +0.9 443,669 - -0.4 443,679 - -0.3 443,709 + +0.3 443,710 - -1.6 443,821 + +1.0 443,848 + -0.7 443,852 - -1.5 443,852 - +0.8 443,941 + -2.0 444,053 + CA264_01905 0.11 +0.2 444,055 + CA264_01905 0.11 -0.0 444,064 - CA264_01905 0.11 +0.4 444,191 - CA264_01905 0.18 -2.2 444,218 - CA264_01905 0.20 -0.6 444,267 - CA264_01905 0.22 -0.9 444,267 - CA264_01905 0.22 +1.0 444,314 - CA264_01905 0.25 +0.4 444,361 - CA264_01905 0.28 -0.3 444,435 + CA264_01905 0.32 -0.1 444,499 - CA264_01905 0.35 -0.7 444,604 - CA264_01905 0.41 -0.6 444,604 - CA264_01905 0.41 -1.1 444,645 + CA264_01905 0.43 -0.2 444,667 + CA264_01905 0.44 -1.1 444,860 - CA264_01905 0.55 -0.0 445,027 + CA264_01905 0.64 +0.3 445,030 - CA264_01905 0.64 +1.9 445,274 - CA264_01905 0.77 -1.5 445,298 + CA264_01905 0.78 -0.7 445,457 + CA264_01905 0.87 -0.7 445,524 - -0.2 445,567 - +0.5 445,695 - -0.9 445,710 - +1.6 445,715 - -0.0 445,731 + -1.0 445,732 - -0.1 445,735 + -0.8 445,735 + +0.0 445,735 + -0.0 445,735 + -1.1 445,736 - -0.2 445,736 - -1.5 445,736 - -0.2 445,736 - -0.7 445,760 + -0.6 445,761 - -0.4 445,761 - -0.6 445,769 + -1.2 445,769 + -0.5 445,769 + +0.4 445,769 + -0.5 445,769 + -0.2 445,769 + -1.0 445,803 + -0.6 445,803 + -1.2 445,803 + -0.3 445,803 + -1.7 445,803 + -0.9 445,804 - -1.0 445,804 - +0.1 445,804 - -0.8 445,853 - -1.1 445,863 + -1.1 445,901 - +0.7 445,910 + -1.1 445,910 + +0.3 445,910 + -1.5 445,910 + -1.5 445,911 - -0.2 445,939 - -0.9 445,941 + -0.7 445,942 - +0.4 445,967 + -0.0 445,985 + CA264_01910 0.11 +0.4 445,985 + CA264_01910 0.11 -0.7 445,986 - CA264_01910 0.11 -0.6 445,989 + CA264_01910 0.12 +1.4 445,990 - CA264_01910 0.12 -0.3 446,041 - CA264_01910 0.21 +1.3 446,042 + CA264_01910 0.21 +0.7 446,042 + CA264_01910 0.21 +3.0 446,043 - CA264_01910 0.22 -0.9 446,043 - CA264_01910 0.22 +0.4 446,043 - CA264_01910 0.22 +0.3 446,077 - CA264_01910 0.28 -0.1 446,227 - CA264_01910 0.55 -0.3 446,227 - CA264_01910 0.55 -0.1 446,307 + CA264_01910 0.70 -0.2 446,352 + CA264_01910 0.78 +1.0 446,353 - CA264_01910 0.78 -0.7 446,353 - CA264_01910 0.78 -0.0 446,378 + CA264_01910 0.83 -0.7 446,379 - CA264_01910 0.83 +0.4 446,410 + CA264_01910 0.89 -0.5 446,410 + CA264_01910 0.89 -0.5 446,411 - CA264_01910 0.89 +0.6 446,432 + -0.1 446,435 - -0.6 446,460 - +0.7 446,472 + -0.4 446,473 - -0.1 446,479 + +0.3 446,479 + -0.2 446,480 - -0.3 446,480 - -1.2 446,482 + -0.1 446,483 - -0.6 446,483 - +0.6 446,483 - -0.3 446,490 - -0.6 446,500 + -0.7 446,500 + -1.6 446,501 - +0.3 446,509 - +0.3 446,538 + -0.2 446,538 + +1.1 446,539 - -0.4 446,545 + -0.8 446,549 + +0.5 446,550 - -1.4 446,550 - -1.5 446,695 - -0.7 446,695 - +0.0
Or see this region's nucleotide sequence