Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01715 and CA264_01720 are separated by 93 nucleotides CA264_01720 and CA264_01725 are separated by 2 nucleotides CA264_01725 and CA264_01730 are separated by 147 nucleotides
CA264_01715: CA264_01715 - 4Fe-4S ferredoxin, at 401,324 to 401,926
_01715
CA264_01720: CA264_01720 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6, at 402,020 to 402,547
_01720
CA264_01725: CA264_01725 - NADH-quinone oxidoreductase subunit K, at 402,550 to 402,864
_01725
CA264_01730: CA264_01730 - NADH-quinone oxidoreductase subunit L, at 403,012 to 405,156
_01730
Position (kb) 402
403 Strain fitness (log2 ratio) -1
0
1 at 401.622 kb on + strand, within CA264_01715 at 401.676 kb on - strand, within CA264_01715 at 401.693 kb on - strand, within CA264_01715 at 402.030 kb on + strand at 402.030 kb on + strand at 402.031 kb on - strand at 402.031 kb on - strand at 402.091 kb on - strand, within CA264_01720 at 402.241 kb on + strand, within CA264_01720 at 402.289 kb on - strand, within CA264_01720 at 402.298 kb on - strand, within CA264_01720 at 402.323 kb on - strand, within CA264_01720 at 402.325 kb on - strand, within CA264_01720 at 402.341 kb on + strand, within CA264_01720 at 402.343 kb on + strand, within CA264_01720 at 402.343 kb on + strand, within CA264_01720 at 402.343 kb on + strand, within CA264_01720 at 402.344 kb on - strand, within CA264_01720 at 402.346 kb on + strand, within CA264_01720 at 402.346 kb on + strand, within CA264_01720 at 402.352 kb on + strand, within CA264_01720 at 402.353 kb on - strand, within CA264_01720 at 402.462 kb on + strand, within CA264_01720 at 402.463 kb on - strand, within CA264_01720 at 402.519 kb on - strand at 402.519 kb on - strand at 402.520 kb on + strand at 402.520 kb on + strand at 402.521 kb on - strand at 402.574 kb on - strand at 402.579 kb on - strand at 402.585 kb on - strand, within CA264_01725 at 402.815 kb on - strand, within CA264_01725 at 402.862 kb on + strand at 402.862 kb on + strand at 402.880 kb on + strand at 402.880 kb on + strand at 402.880 kb on + strand at 402.880 kb on + strand at 402.897 kb on + strand at 402.897 kb on + strand at 402.897 kb on + strand at 402.901 kb on + strand at 402.917 kb on + strand at 402.917 kb on + strand at 402.917 kb on + strand at 402.918 kb on - strand at 402.918 kb on - strand at 402.923 kb on + strand at 402.953 kb on + strand at 402.972 kb on - strand at 403.002 kb on - strand at 403.002 kb on - strand at 403.084 kb on + strand at 403.128 kb on + strand at 403.129 kb on - strand at 403.152 kb on + strand at 403.199 kb on - strand at 403.241 kb on + strand, within CA264_01730 at 403.364 kb on - strand, within CA264_01730 at 403.402 kb on - strand, within CA264_01730 at 403.410 kb on - strand, within CA264_01730 at 403.544 kb on + strand, within CA264_01730 at 403.563 kb on - strand, within CA264_01730 at 403.592 kb on - strand, within CA264_01730 at 403.626 kb on - strand, within CA264_01730 at 403.669 kb on - strand, within CA264_01730 at 403.707 kb on - strand, within CA264_01730 at 403.713 kb on - strand, within CA264_01730 at 403.753 kb on - strand, within CA264_01730 at 403.763 kb on + strand, within CA264_01730 at 403.842 kb on - strand, within CA264_01730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 401,622 + CA264_01715 0.49 +0.5 401,676 - CA264_01715 0.58 -0.1 401,693 - CA264_01715 0.61 +0.2 402,030 + +0.4 402,030 + +1.2 402,031 - -0.2 402,031 - +0.3 402,091 - CA264_01720 0.13 +0.8 402,241 + CA264_01720 0.42 +0.3 402,289 - CA264_01720 0.51 -1.0 402,298 - CA264_01720 0.53 -0.7 402,323 - CA264_01720 0.57 -0.1 402,325 - CA264_01720 0.58 -0.3 402,341 + CA264_01720 0.61 +0.5 402,343 + CA264_01720 0.61 -0.5 402,343 + CA264_01720 0.61 +0.4 402,343 + CA264_01720 0.61 -0.1 402,344 - CA264_01720 0.61 +0.0 402,346 + CA264_01720 0.62 +0.2 402,346 + CA264_01720 0.62 +0.1 402,352 + CA264_01720 0.63 -0.1 402,353 - CA264_01720 0.63 +0.2 402,462 + CA264_01720 0.84 -0.1 402,463 - CA264_01720 0.84 -0.7 402,519 - +0.7 402,519 - +0.1 402,520 + +0.5 402,520 + +0.2 402,521 - +0.6 402,574 - -0.2 402,579 - -1.5 402,585 - CA264_01725 0.11 -1.3 402,815 - CA264_01725 0.84 -0.2 402,862 + -1.4 402,862 + +0.6 402,880 + -0.9 402,880 + -1.0 402,880 + -1.2 402,880 + -0.2 402,897 + -0.1 402,897 + +0.0 402,897 + -0.5 402,901 + -0.4 402,917 + +1.4 402,917 + +0.2 402,917 + -0.2 402,918 - -0.3 402,918 - -0.2 402,923 + -0.6 402,953 + -0.4 402,972 - -0.8 403,002 - -0.5 403,002 - -0.4 403,084 + -0.1 403,128 + -0.7 403,129 - -0.8 403,152 + +0.5 403,199 - +0.1 403,241 + CA264_01730 0.11 -0.7 403,364 - CA264_01730 0.16 +1.0 403,402 - CA264_01730 0.18 -1.0 403,410 - CA264_01730 0.19 -0.2 403,544 + CA264_01730 0.25 -0.9 403,563 - CA264_01730 0.26 +0.7 403,592 - CA264_01730 0.27 -0.0 403,626 - CA264_01730 0.29 +0.8 403,669 - CA264_01730 0.31 +0.3 403,707 - CA264_01730 0.32 -0.5 403,713 - CA264_01730 0.33 -0.2 403,753 - CA264_01730 0.35 +0.1 403,763 + CA264_01730 0.35 -0.6 403,842 - CA264_01730 0.39 +0.0
Or see this region's nucleotide sequence