Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00785 and CA264_00790 are separated by 103 nucleotides CA264_00790 and CA264_00795 are separated by 77 nucleotides CA264_00795 and CA264_00800 are separated by 434 nucleotides
CA264_00785: CA264_00785 - hypothetical protein, at 167,980 to 169,044
_00785
CA264_00790: CA264_00790 - hypothetical protein, at 169,148 to 169,693
_00790
CA264_00795: CA264_00795 - hypothetical protein, at 169,771 to 171,078
_00795
CA264_00800: CA264_00800 - hypothetical protein, at 171,513 to 172,664
_00800
Position (kb) 169
170
171
172 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 168.800 kb on + strand, within CA264_00785 at 168.837 kb on - strand, within CA264_00785 at 168.837 kb on - strand, within CA264_00785 at 168.837 kb on - strand, within CA264_00785 at 168.846 kb on + strand, within CA264_00785 at 168.866 kb on + strand, within CA264_00785 at 169.016 kb on - strand at 169.016 kb on - strand at 169.030 kb on - strand at 169.030 kb on - strand at 169.030 kb on - strand at 169.033 kb on + strand at 169.033 kb on + strand at 169.033 kb on + strand at 169.122 kb on - strand at 169.122 kb on - strand at 169.122 kb on - strand at 169.122 kb on - strand at 169.123 kb on + strand at 169.123 kb on + strand at 169.124 kb on - strand at 169.124 kb on - strand at 169.124 kb on - strand at 169.124 kb on - strand at 169.124 kb on - strand at 169.146 kb on - strand at 169.149 kb on + strand at 169.150 kb on - strand at 169.154 kb on + strand at 169.157 kb on + strand at 169.157 kb on + strand at 169.158 kb on - strand at 169.176 kb on - strand at 169.176 kb on - strand at 169.192 kb on + strand at 169.247 kb on + strand, within CA264_00790 at 169.286 kb on - strand, within CA264_00790 at 169.317 kb on + strand, within CA264_00790 at 169.317 kb on + strand, within CA264_00790 at 169.317 kb on + strand, within CA264_00790 at 169.318 kb on - strand, within CA264_00790 at 169.327 kb on + strand, within CA264_00790 at 169.357 kb on - strand, within CA264_00790 at 169.427 kb on + strand, within CA264_00790 at 169.428 kb on - strand, within CA264_00790 at 169.454 kb on + strand, within CA264_00790 at 169.510 kb on - strand, within CA264_00790 at 169.559 kb on + strand, within CA264_00790 at 169.560 kb on - strand, within CA264_00790 at 169.572 kb on + strand, within CA264_00790 at 169.572 kb on + strand, within CA264_00790 at 169.573 kb on - strand, within CA264_00790 at 169.573 kb on - strand, within CA264_00790 at 169.607 kb on + strand, within CA264_00790 at 169.607 kb on + strand, within CA264_00790 at 169.678 kb on + strand at 169.714 kb on - strand at 169.717 kb on + strand at 169.721 kb on + strand at 169.721 kb on + strand at 169.721 kb on + strand at 169.721 kb on + strand at 169.722 kb on - strand at 169.722 kb on - strand at 169.722 kb on - strand at 169.726 kb on + strand at 169.727 kb on - strand at 169.727 kb on - strand at 169.728 kb on + strand at 169.728 kb on + strand at 169.728 kb on + strand at 169.729 kb on - strand at 169.729 kb on - strand at 169.730 kb on + strand at 169.731 kb on - strand at 169.731 kb on - strand at 169.731 kb on - strand at 169.731 kb on - strand at 169.773 kb on - strand at 169.773 kb on - strand at 169.773 kb on - strand at 169.791 kb on - strand at 169.804 kb on - strand at 169.816 kb on + strand at 169.897 kb on + strand at 169.898 kb on - strand at 169.898 kb on - strand at 169.898 kb on - strand at 169.973 kb on + strand, within CA264_00795 at 169.979 kb on - strand, within CA264_00795 at 169.994 kb on + strand, within CA264_00795 at 170.054 kb on + strand, within CA264_00795 at 170.070 kb on + strand, within CA264_00795 at 170.071 kb on - strand, within CA264_00795 at 170.098 kb on + strand, within CA264_00795 at 170.098 kb on + strand, within CA264_00795 at 170.166 kb on - strand, within CA264_00795 at 170.186 kb on + strand, within CA264_00795 at 170.186 kb on + strand, within CA264_00795 at 170.186 kb on + strand, within CA264_00795 at 170.187 kb on - strand, within CA264_00795 at 170.187 kb on - strand, within CA264_00795 at 170.187 kb on - strand, within CA264_00795 at 170.189 kb on + strand, within CA264_00795 at 170.224 kb on - strand, within CA264_00795 at 170.228 kb on - strand, within CA264_00795 at 170.325 kb on - strand, within CA264_00795 at 170.347 kb on - strand, within CA264_00795 at 170.347 kb on - strand, within CA264_00795 at 170.347 kb on - strand, within CA264_00795 at 170.347 kb on - strand, within CA264_00795 at 170.507 kb on + strand, within CA264_00795 at 170.508 kb on - strand, within CA264_00795 at 170.529 kb on - strand, within CA264_00795 at 170.529 kb on - strand, within CA264_00795 at 170.545 kb on + strand, within CA264_00795 at 170.546 kb on - strand, within CA264_00795 at 170.546 kb on - strand, within CA264_00795 at 170.565 kb on + strand, within CA264_00795 at 170.566 kb on - strand, within CA264_00795 at 170.575 kb on - strand, within CA264_00795 at 170.632 kb on + strand, within CA264_00795 at 170.659 kb on + strand, within CA264_00795 at 170.698 kb on + strand, within CA264_00795 at 170.699 kb on - strand, within CA264_00795 at 170.703 kb on - strand, within CA264_00795 at 170.703 kb on - strand, within CA264_00795 at 170.726 kb on + strand, within CA264_00795 at 170.763 kb on - strand, within CA264_00795 at 170.857 kb on + strand, within CA264_00795 at 170.860 kb on + strand, within CA264_00795 at 170.860 kb on + strand, within CA264_00795 at 170.860 kb on + strand, within CA264_00795 at 170.861 kb on - strand, within CA264_00795 at 170.861 kb on - strand, within CA264_00795 at 170.861 kb on - strand, within CA264_00795 at 170.932 kb on + strand, within CA264_00795 at 170.944 kb on + strand, within CA264_00795 at 170.945 kb on - strand, within CA264_00795 at 170.945 kb on - strand, within CA264_00795 at 170.992 kb on + strand at 170.993 kb on - strand at 171.003 kb on - strand at 171.033 kb on + strand at 171.045 kb on + strand at 171.053 kb on - strand at 171.053 kb on - strand at 171.053 kb on - strand at 171.053 kb on - strand at 171.054 kb on + strand at 171.081 kb on - strand at 171.091 kb on + strand at 171.092 kb on - strand at 171.158 kb on - strand at 171.162 kb on + strand at 171.162 kb on + strand at 171.163 kb on - strand at 171.163 kb on - strand at 171.183 kb on + strand at 171.314 kb on - strand at 171.314 kb on - strand at 171.315 kb on + strand at 171.316 kb on - strand at 171.316 kb on - strand at 171.316 kb on - strand at 171.317 kb on - strand at 171.379 kb on - strand at 171.388 kb on - strand at 171.388 kb on - strand at 171.408 kb on + strand at 171.475 kb on + strand at 171.476 kb on - strand at 171.506 kb on + strand at 171.515 kb on - strand at 171.537 kb on + strand at 171.537 kb on + strand at 171.537 kb on + strand at 171.538 kb on - strand at 171.538 kb on - strand at 171.538 kb on - strand at 171.540 kb on + strand at 171.547 kb on - strand at 171.556 kb on + strand at 171.556 kb on + strand at 171.556 kb on + strand at 171.591 kb on - strand at 171.591 kb on - strand at 171.613 kb on - strand at 171.642 kb on + strand, within CA264_00800 at 171.642 kb on + strand, within CA264_00800 at 171.642 kb on + strand, within CA264_00800 at 171.643 kb on - strand, within CA264_00800 at 171.643 kb on - strand, within CA264_00800 at 171.643 kb on - strand, within CA264_00800 at 171.706 kb on + strand, within CA264_00800 at 171.706 kb on + strand, within CA264_00800 at 171.706 kb on + strand, within CA264_00800 at 171.709 kb on + strand, within CA264_00800 at 171.710 kb on - strand, within CA264_00800 at 171.813 kb on + strand, within CA264_00800 at 171.814 kb on - strand, within CA264_00800 at 171.814 kb on - strand, within CA264_00800 at 171.814 kb on - strand, within CA264_00800 at 171.880 kb on + strand, within CA264_00800 at 171.909 kb on + strand, within CA264_00800 at 171.909 kb on + strand, within CA264_00800 at 171.909 kb on + strand, within CA264_00800 at 171.910 kb on - strand, within CA264_00800 at 171.910 kb on - strand, within CA264_00800 at 171.911 kb on + strand, within CA264_00800 at 171.911 kb on + strand, within CA264_00800 at 171.911 kb on + strand, within CA264_00800 at 171.911 kb on + strand, within CA264_00800 at 171.912 kb on - strand, within CA264_00800 at 171.912 kb on - strand, within CA264_00800 at 171.912 kb on - strand, within CA264_00800 at 171.943 kb on - strand, within CA264_00800 at 171.943 kb on - strand, within CA264_00800 at 171.953 kb on + strand, within CA264_00800 at 172.031 kb on + strand, within CA264_00800 at 172.031 kb on + strand, within CA264_00800 at 172.031 kb on + strand, within CA264_00800 at 172.031 kb on + strand, within CA264_00800 at 172.031 kb on + strand, within CA264_00800 at 172.032 kb on - strand, within CA264_00800 at 172.035 kb on + strand, within CA264_00800 at 172.036 kb on - strand, within CA264_00800 at 172.036 kb on - strand, within CA264_00800
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 168,800 + CA264_00785 0.77 -0.9 168,837 - CA264_00785 0.80 -0.2 168,837 - CA264_00785 0.80 -0.1 168,837 - CA264_00785 0.80 -0.7 168,846 + CA264_00785 0.81 -0.9 168,866 + CA264_00785 0.83 -1.8 169,016 - -0.2 169,016 - +1.6 169,030 - -1.1 169,030 - -0.7 169,030 - -0.1 169,033 + -0.3 169,033 + -0.7 169,033 + -0.2 169,122 - -0.5 169,122 - -0.7 169,122 - -0.9 169,122 - +0.2 169,123 + -0.8 169,123 + -0.1 169,124 - +0.1 169,124 - +0.5 169,124 - +0.2 169,124 - -0.7 169,124 - -0.6 169,146 - -0.9 169,149 + -0.0 169,150 - -1.7 169,154 + +0.5 169,157 + -1.0 169,157 + +1.2 169,158 - -1.2 169,176 - -0.2 169,176 - -1.0 169,192 + -0.5 169,247 + CA264_00790 0.18 -0.6 169,286 - CA264_00790 0.25 -0.5 169,317 + CA264_00790 0.31 +0.2 169,317 + CA264_00790 0.31 -0.3 169,317 + CA264_00790 0.31 -0.6 169,318 - CA264_00790 0.31 -1.1 169,327 + CA264_00790 0.33 -1.0 169,357 - CA264_00790 0.38 -1.0 169,427 + CA264_00790 0.51 -0.1 169,428 - CA264_00790 0.51 -0.4 169,454 + CA264_00790 0.56 -1.2 169,510 - CA264_00790 0.66 -0.3 169,559 + CA264_00790 0.75 -0.8 169,560 - CA264_00790 0.75 -0.4 169,572 + CA264_00790 0.78 -0.6 169,572 + CA264_00790 0.78 +0.5 169,573 - CA264_00790 0.78 -0.2 169,573 - CA264_00790 0.78 -1.6 169,607 + CA264_00790 0.84 -0.3 169,607 + CA264_00790 0.84 -0.4 169,678 + -2.0 169,714 - +0.5 169,717 + -1.3 169,721 + -1.4 169,721 + -1.3 169,721 + -0.0 169,721 + -1.0 169,722 - -0.1 169,722 - -1.2 169,722 - -0.3 169,726 + -1.5 169,727 - -0.9 169,727 - -1.7 169,728 + -1.5 169,728 + -0.0 169,728 + -2.7 169,729 - -2.2 169,729 - -1.1 169,730 + -1.1 169,731 - -0.7 169,731 - -0.4 169,731 - -0.4 169,731 - -0.7 169,773 - -0.9 169,773 - -1.0 169,773 - +0.7 169,791 - +0.1 169,804 - -1.2 169,816 + -0.6 169,897 + -0.6 169,898 - -0.7 169,898 - -0.6 169,898 - -1.4 169,973 + CA264_00795 0.15 -0.5 169,979 - CA264_00795 0.16 -0.2 169,994 + CA264_00795 0.17 -1.5 170,054 + CA264_00795 0.22 +0.7 170,070 + CA264_00795 0.23 -1.5 170,071 - CA264_00795 0.23 -0.9 170,098 + CA264_00795 0.25 -0.0 170,098 + CA264_00795 0.25 -0.6 170,166 - CA264_00795 0.30 -1.2 170,186 + CA264_00795 0.32 -0.6 170,186 + CA264_00795 0.32 -0.9 170,186 + CA264_00795 0.32 -0.5 170,187 - CA264_00795 0.32 -1.1 170,187 - CA264_00795 0.32 -1.5 170,187 - CA264_00795 0.32 +0.7 170,189 + CA264_00795 0.32 -0.2 170,224 - CA264_00795 0.35 -0.2 170,228 - CA264_00795 0.35 -0.4 170,325 - CA264_00795 0.42 -0.5 170,347 - CA264_00795 0.44 +0.9 170,347 - CA264_00795 0.44 +0.8 170,347 - CA264_00795 0.44 -1.0 170,347 - CA264_00795 0.44 -1.2 170,507 + CA264_00795 0.56 +0.8 170,508 - CA264_00795 0.56 +1.4 170,529 - CA264_00795 0.58 -0.3 170,529 - CA264_00795 0.58 -0.4 170,545 + CA264_00795 0.59 -0.8 170,546 - CA264_00795 0.59 -0.2 170,546 - CA264_00795 0.59 -1.6 170,565 + CA264_00795 0.61 -0.6 170,566 - CA264_00795 0.61 -1.6 170,575 - CA264_00795 0.61 -0.2 170,632 + CA264_00795 0.66 -0.8 170,659 + CA264_00795 0.68 -1.0 170,698 + CA264_00795 0.71 -0.7 170,699 - CA264_00795 0.71 -1.7 170,703 - CA264_00795 0.71 -1.2 170,703 - CA264_00795 0.71 -1.2 170,726 + CA264_00795 0.73 -1.3 170,763 - CA264_00795 0.76 +0.8 170,857 + CA264_00795 0.83 -0.7 170,860 + CA264_00795 0.83 -0.9 170,860 + CA264_00795 0.83 -0.6 170,860 + CA264_00795 0.83 -0.9 170,861 - CA264_00795 0.83 -0.8 170,861 - CA264_00795 0.83 -0.8 170,861 - CA264_00795 0.83 -0.2 170,932 + CA264_00795 0.89 -1.0 170,944 + CA264_00795 0.90 -0.8 170,945 - CA264_00795 0.90 -0.9 170,945 - CA264_00795 0.90 +0.1 170,992 + +0.2 170,993 - -0.3 171,003 - -0.8 171,033 + +2.1 171,045 + -0.8 171,053 - -0.7 171,053 - -0.6 171,053 - -0.9 171,053 - +0.6 171,054 + -0.9 171,081 - +0.1 171,091 + -0.7 171,092 - -1.1 171,158 - -0.7 171,162 + -2.1 171,162 + +0.1 171,163 - -1.5 171,163 - +0.1 171,183 + -0.7 171,314 - -2.9 171,314 - -0.2 171,315 + -0.5 171,316 - +0.5 171,316 - +0.0 171,316 - -0.6 171,317 - -1.5 171,379 - -0.9 171,388 - -0.2 171,388 - -0.9 171,408 + -0.8 171,475 + -1.2 171,476 - -1.0 171,506 + -0.8 171,515 - -1.0 171,537 + -0.6 171,537 + -0.6 171,537 + +0.3 171,538 - +0.4 171,538 - -0.6 171,538 - -0.9 171,540 + -0.6 171,547 - -0.2 171,556 + -0.5 171,556 + -0.7 171,556 + +1.0 171,591 - -0.1 171,591 - -0.5 171,613 - -2.4 171,642 + CA264_00800 0.11 -0.9 171,642 + CA264_00800 0.11 -0.4 171,642 + CA264_00800 0.11 -1.7 171,643 - CA264_00800 0.11 +0.1 171,643 - CA264_00800 0.11 -0.7 171,643 - CA264_00800 0.11 -0.5 171,706 + CA264_00800 0.17 -0.8 171,706 + CA264_00800 0.17 -0.6 171,706 + CA264_00800 0.17 -0.4 171,709 + CA264_00800 0.17 -0.1 171,710 - CA264_00800 0.17 -2.0 171,813 + CA264_00800 0.26 -1.2 171,814 - CA264_00800 0.26 -0.4 171,814 - CA264_00800 0.26 -0.6 171,814 - CA264_00800 0.26 -1.6 171,880 + CA264_00800 0.32 +0.5 171,909 + CA264_00800 0.34 -0.9 171,909 + CA264_00800 0.34 -0.7 171,909 + CA264_00800 0.34 -0.6 171,910 - CA264_00800 0.34 -1.6 171,910 - CA264_00800 0.34 -1.2 171,911 + CA264_00800 0.35 +0.4 171,911 + CA264_00800 0.35 -0.2 171,911 + CA264_00800 0.35 -0.5 171,911 + CA264_00800 0.35 -0.9 171,912 - CA264_00800 0.35 -0.7 171,912 - CA264_00800 0.35 +1.5 171,912 - CA264_00800 0.35 -0.4 171,943 - CA264_00800 0.37 -0.9 171,943 - CA264_00800 0.37 -1.4 171,953 + CA264_00800 0.38 -0.7 172,031 + CA264_00800 0.45 +1.1 172,031 + CA264_00800 0.45 +0.8 172,031 + CA264_00800 0.45 +0.5 172,031 + CA264_00800 0.45 -0.6 172,031 + CA264_00800 0.45 -0.6 172,032 - CA264_00800 0.45 -0.4 172,035 + CA264_00800 0.45 -0.1 172,036 - CA264_00800 0.45 +0.1 172,036 - CA264_00800 0.45 -1.1
Or see this region's nucleotide sequence