Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03640 and PS417_03645 overlap by 14 nucleotides PS417_03645 and PS417_03650 overlap by 4 nucleotides
PS417_03640: PS417_03640 - cyclopropane-fatty-acyl-phospholipid synthase, at 825,073 to 826,344
_03640
PS417_03645: PS417_03645 - hypothetical protein, at 826,331 to 827,140
_03645
PS417_03650: PS417_03650 - FAD-dependent oxidoreductase, at 827,137 to 828,384
_03650
Position (kb) 826
827
828 Strain fitness (log2 ratio) -2
-1
0
1
2 at 825.390 kb on + strand, within PS417_03640 at 825.391 kb on - strand, within PS417_03640 at 825.392 kb on + strand, within PS417_03640 at 825.393 kb on - strand, within PS417_03640 at 825.702 kb on - strand, within PS417_03640 at 825.861 kb on - strand, within PS417_03640 at 825.861 kb on - strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 825.911 kb on + strand, within PS417_03640 at 826.024 kb on + strand, within PS417_03640 at 826.024 kb on + strand, within PS417_03640 at 826.024 kb on + strand, within PS417_03640 at 826.025 kb on - strand, within PS417_03640 at 826.198 kb on + strand, within PS417_03640 at 826.243 kb on + strand at 826.243 kb on + strand at 826.244 kb on - strand at 826.244 kb on - strand at 826.244 kb on - strand at 826.244 kb on - strand at 826.449 kb on + strand, within PS417_03645 at 826.449 kb on + strand, within PS417_03645 at 826.449 kb on + strand, within PS417_03645 at 826.450 kb on - strand, within PS417_03645 at 826.450 kb on - strand at 826.497 kb on + strand, within PS417_03645 at 826.498 kb on - strand, within PS417_03645 at 826.629 kb on + strand, within PS417_03645 at 826.729 kb on - strand, within PS417_03645 at 826.729 kb on - strand, within PS417_03645 at 826.806 kb on + strand, within PS417_03645 at 826.807 kb on - strand, within PS417_03645 at 826.826 kb on - strand, within PS417_03645 at 826.882 kb on + strand, within PS417_03645 at 826.883 kb on - strand, within PS417_03645 at 826.883 kb on - strand, within PS417_03645 at 826.959 kb on + strand, within PS417_03645 at 827.225 kb on + strand at 827.226 kb on - strand at 827.248 kb on + strand at 827.291 kb on + strand, within PS417_03650 at 827.291 kb on + strand, within PS417_03650 at 827.292 kb on - strand, within PS417_03650 at 827.292 kb on - strand, within PS417_03650 at 827.306 kb on + strand, within PS417_03650 at 827.306 kb on + strand, within PS417_03650 at 827.306 kb on + strand, within PS417_03650 at 827.307 kb on - strand, within PS417_03650 at 827.307 kb on - strand, within PS417_03650 at 827.411 kb on + strand, within PS417_03650 at 827.412 kb on - strand, within PS417_03650 at 827.412 kb on - strand, within PS417_03650 at 827.412 kb on - strand, within PS417_03650 at 827.412 kb on - strand, within PS417_03650 at 827.412 kb on - strand, within PS417_03650 at 827.744 kb on + strand, within PS417_03650 at 827.744 kb on + strand, within PS417_03650 at 827.745 kb on - strand, within PS417_03650 at 827.745 kb on - strand, within PS417_03650 at 827.745 kb on - strand, within PS417_03650 at 827.745 kb on - strand, within PS417_03650 at 827.745 kb on - strand, within PS417_03650 at 827.900 kb on + strand, within PS417_03650 at 827.901 kb on - strand, within PS417_03650 at 827.901 kb on - strand, within PS417_03650
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 825,390 + PS417_03640 0.25 -0.1 825,391 - PS417_03640 0.25 -0.2 825,392 + PS417_03640 0.25 +0.1 825,393 - PS417_03640 0.25 +0.1 825,702 - PS417_03640 0.49 +0.5 825,861 - PS417_03640 0.62 +0.2 825,861 - PS417_03640 0.62 -0.1 825,911 + PS417_03640 0.66 -0.3 825,911 + PS417_03640 0.66 +0.0 825,911 + PS417_03640 0.66 -0.3 825,911 + PS417_03640 0.66 -0.8 826,024 + PS417_03640 0.75 +0.2 826,024 + PS417_03640 0.75 +0.5 826,024 + PS417_03640 0.75 +0.2 826,025 - PS417_03640 0.75 -0.0 826,198 + PS417_03640 0.88 -0.3 826,243 + -0.1 826,243 + +0.0 826,244 - -1.2 826,244 - -0.5 826,244 - +0.0 826,244 - -0.2 826,449 + PS417_03645 0.15 +2.2 826,449 + PS417_03645 0.15 -0.0 826,449 + PS417_03645 0.15 -0.5 826,450 - PS417_03645 0.15 -0.5 826,450 - -0.1 826,497 + PS417_03645 0.20 +1.7 826,498 - PS417_03645 0.21 +0.1 826,629 + PS417_03645 0.37 -0.0 826,729 - PS417_03645 0.49 +1.1 826,729 - PS417_03645 0.49 +1.6 826,806 + PS417_03645 0.59 +0.1 826,807 - PS417_03645 0.59 +0.5 826,826 - PS417_03645 0.61 +0.5 826,882 + PS417_03645 0.68 +0.6 826,883 - PS417_03645 0.68 -0.1 826,883 - PS417_03645 0.68 +0.2 826,959 + PS417_03645 0.78 +1.1 827,225 + -0.0 827,226 - -0.5 827,248 + +1.2 827,291 + PS417_03650 0.12 +0.2 827,291 + PS417_03650 0.12 -0.4 827,292 - PS417_03650 0.12 -0.2 827,292 - PS417_03650 0.12 -0.1 827,306 + PS417_03650 0.14 +0.8 827,306 + PS417_03650 0.14 +0.1 827,306 + PS417_03650 0.14 -0.5 827,307 - PS417_03650 0.14 -0.2 827,307 - PS417_03650 0.14 +0.2 827,411 + PS417_03650 0.22 +0.3 827,412 - PS417_03650 0.22 +0.5 827,412 - PS417_03650 0.22 -1.9 827,412 - PS417_03650 0.22 +1.1 827,412 - PS417_03650 0.22 -0.1 827,412 - PS417_03650 0.22 -0.7 827,744 + PS417_03650 0.49 -0.3 827,744 + PS417_03650 0.49 -0.5 827,745 - PS417_03650 0.49 -1.5 827,745 - PS417_03650 0.49 -0.0 827,745 - PS417_03650 0.49 -0.6 827,745 - PS417_03650 0.49 -0.0 827,745 - PS417_03650 0.49 +0.5 827,900 + PS417_03650 0.61 +0.2 827,901 - PS417_03650 0.61 +0.0 827,901 - PS417_03650 0.61 +0.9
Or see this region's nucleotide sequence