Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12865 and PS417_12870 are separated by 192 nucleotides PS417_12870 and PS417_12875 are separated by 5 nucleotides PS417_12875 and PS417_12880 overlap by 33 nucleotides
PS417_12865: PS417_12865 - chloride channel protein, at 2,813,746 to 2,814,993
_12865
PS417_12870: PS417_12870 - enoyl-CoA hydratase, at 2,815,186 to 2,815,998
_12870
PS417_12875: PS417_12875 - NADH pyrophosphatase, at 2,816,004 to 2,816,837
_12875
PS417_12880: PS417_12880 - membrane protein, at 2,816,805 to 2,817,584
_12880
Position (kb)
2815
2816 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2814.346 kb on + strand, within PS417_12865 at 2814.346 kb on + strand, within PS417_12865 at 2814.347 kb on - strand, within PS417_12865 at 2814.443 kb on - strand, within PS417_12865 at 2814.483 kb on - strand, within PS417_12865 at 2814.865 kb on - strand, within PS417_12865 at 2814.994 kb on - strand at 2815.022 kb on + strand at 2815.022 kb on + strand at 2815.023 kb on - strand at 2815.023 kb on - strand at 2815.023 kb on - strand at 2815.025 kb on - strand at 2815.145 kb on - strand at 2815.145 kb on - strand at 2815.146 kb on + strand at 2815.146 kb on + strand at 2815.146 kb on + strand at 2815.147 kb on - strand at 2815.147 kb on - strand at 2815.147 kb on - strand at 2815.147 kb on - strand at 2815.159 kb on - strand at 2815.702 kb on + strand, within PS417_12870 at 2815.865 kb on - strand, within PS417_12870 at 2815.900 kb on + strand, within PS417_12870 at 2815.923 kb on + strand at 2816.298 kb on + strand, within PS417_12875 at 2816.391 kb on + strand, within PS417_12875 at 2816.392 kb on - strand, within PS417_12875 at 2816.509 kb on - strand, within PS417_12875 at 2816.509 kb on - strand, within PS417_12875 at 2816.509 kb on - strand, within PS417_12875 at 2816.509 kb on - strand, within PS417_12875 at 2816.590 kb on + strand, within PS417_12875 at 2816.604 kb on - strand, within PS417_12875 at 2816.610 kb on + strand, within PS417_12875 at 2816.610 kb on + strand, within PS417_12875 at 2816.610 kb on + strand at 2816.611 kb on - strand, within PS417_12875 at 2816.611 kb on - strand, within PS417_12875 at 2816.611 kb on - strand, within PS417_12875 at 2816.611 kb on - strand, within PS417_12875 at 2816.791 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 2,814,346 + PS417_12865 0.48 -0.3 2,814,346 + PS417_12865 0.48 -0.4 2,814,347 - PS417_12865 0.48 +0.7 2,814,443 - PS417_12865 0.56 +1.1 2,814,483 - PS417_12865 0.59 -1.1 2,814,865 - PS417_12865 0.90 +0.1 2,814,994 - -0.2 2,815,022 + -0.1 2,815,022 + -0.2 2,815,023 - +0.4 2,815,023 - -0.9 2,815,023 - -0.9 2,815,025 - -0.1 2,815,145 - +0.4 2,815,145 - -0.1 2,815,146 + -0.3 2,815,146 + +0.3 2,815,146 + -0.0 2,815,147 - -0.5 2,815,147 - -0.0 2,815,147 - +0.3 2,815,147 - -0.5 2,815,159 - +0.2 2,815,702 + PS417_12870 0.63 +0.1 2,815,865 - PS417_12870 0.84 -0.0 2,815,900 + PS417_12870 0.88 +3.2 2,815,923 + -0.2 2,816,298 + PS417_12875 0.35 +0.0 2,816,391 + PS417_12875 0.46 +1.2 2,816,392 - PS417_12875 0.47 -0.2 2,816,509 - PS417_12875 0.61 -1.7 2,816,509 - PS417_12875 0.61 +0.4 2,816,509 - PS417_12875 0.61 -0.9 2,816,509 - PS417_12875 0.61 -0.0 2,816,590 + PS417_12875 0.70 +0.4 2,816,604 - PS417_12875 0.72 -0.3 2,816,610 + PS417_12875 0.73 -0.3 2,816,610 + PS417_12875 0.73 -0.9 2,816,610 + +1.7 2,816,611 - PS417_12875 0.73 +0.4 2,816,611 - PS417_12875 0.73 +1.0 2,816,611 - PS417_12875 0.73 +0.1 2,816,611 - PS417_12875 0.73 +0.0 2,816,791 - +0.1
Or see this region's nucleotide sequence