Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21170 and CA264_21175 are separated by 184 nucleotides CA264_21175 and CA264_21180 are separated by 181 nucleotides
CA264_21170: CA264_21170 - hypothetical protein, at 100,942 to 101,574
_21170
CA264_21175: CA264_21175 - STAS/SEC14 domain-containing protein, at 101,759 to 102,115
_21175
CA264_21180: CA264_21180 - ribulose-phosphate 3-epimerase, at 102,297 to 102,953
_21180
Position (kb)
101
102
103 Strain fitness (log2 ratio)
-1
0
1 at 100.764 kb on + strand at 100.767 kb on + strand at 100.768 kb on - strand at 100.830 kb on - strand at 100.838 kb on + strand at 100.839 kb on - strand at 100.894 kb on + strand at 100.894 kb on + strand at 100.895 kb on - strand at 100.895 kb on - strand at 100.895 kb on - strand at 100.895 kb on - strand at 100.924 kb on + strand at 100.933 kb on - strand at 100.933 kb on - strand at 100.933 kb on - strand at 100.941 kb on + strand at 100.957 kb on + strand at 100.986 kb on - strand at 100.995 kb on + strand at 101.019 kb on - strand, within CA264_21170 at 101.067 kb on - strand, within CA264_21170 at 101.074 kb on + strand, within CA264_21170 at 101.075 kb on - strand, within CA264_21170 at 101.075 kb on - strand, within CA264_21170 at 101.078 kb on + strand, within CA264_21170 at 101.127 kb on - strand, within CA264_21170 at 101.260 kb on + strand, within CA264_21170 at 101.261 kb on - strand, within CA264_21170 at 101.275 kb on - strand, within CA264_21170 at 101.321 kb on + strand, within CA264_21170 at 101.379 kb on - strand, within CA264_21170 at 101.417 kb on + strand, within CA264_21170 at 101.418 kb on - strand, within CA264_21170 at 101.418 kb on - strand, within CA264_21170 at 101.475 kb on + strand, within CA264_21170 at 101.475 kb on + strand, within CA264_21170 at 101.476 kb on - strand, within CA264_21170 at 101.506 kb on + strand, within CA264_21170 at 101.507 kb on - strand, within CA264_21170 at 101.507 kb on - strand, within CA264_21170 at 101.507 kb on - strand, within CA264_21170 at 101.507 kb on - strand, within CA264_21170 at 101.509 kb on + strand, within CA264_21170 at 101.509 kb on + strand, within CA264_21170 at 101.510 kb on - strand, within CA264_21170 at 101.510 kb on - strand, within CA264_21170 at 101.514 kb on + strand at 101.515 kb on - strand at 101.515 kb on - strand at 101.565 kb on + strand at 101.565 kb on + strand at 101.575 kb on + strand at 101.592 kb on + strand at 101.592 kb on + strand at 101.592 kb on + strand at 101.592 kb on + strand at 101.593 kb on - strand at 101.593 kb on - strand at 101.593 kb on - strand at 101.593 kb on - strand at 101.593 kb on - strand at 101.615 kb on + strand at 101.668 kb on + strand at 101.668 kb on + strand at 101.669 kb on - strand at 101.669 kb on - strand at 101.669 kb on - strand at 101.669 kb on - strand at 101.672 kb on + strand at 101.713 kb on + strand at 101.713 kb on + strand at 101.714 kb on - strand at 101.714 kb on - strand at 101.844 kb on + strand, within CA264_21175 at 101.865 kb on + strand, within CA264_21175 at 101.866 kb on - strand, within CA264_21175 at 101.866 kb on - strand, within CA264_21175 at 101.869 kb on - strand, within CA264_21175 at 101.894 kb on + strand, within CA264_21175 at 101.895 kb on - strand, within CA264_21175 at 102.047 kb on - strand, within CA264_21175 at 102.065 kb on + strand, within CA264_21175 at 102.154 kb on + strand at 102.154 kb on + strand at 102.155 kb on - strand at 102.173 kb on - strand at 102.175 kb on - strand at 102.180 kb on - strand at 102.408 kb on + strand, within CA264_21180 at 102.409 kb on - strand, within CA264_21180 at 102.467 kb on + strand, within CA264_21180 at 102.467 kb on + strand, within CA264_21180 at 102.467 kb on + strand, within CA264_21180 at 102.541 kb on - strand, within CA264_21180 at 102.541 kb on - strand, within CA264_21180 at 102.580 kb on + strand, within CA264_21180 at 102.636 kb on + strand, within CA264_21180 at 102.646 kb on - strand, within CA264_21180 at 102.654 kb on + strand, within CA264_21180 at 102.705 kb on + strand, within CA264_21180 at 102.706 kb on - strand, within CA264_21180 at 102.706 kb on - strand, within CA264_21180 at 102.780 kb on - strand, within CA264_21180 at 102.838 kb on - strand, within CA264_21180 at 102.855 kb on + strand, within CA264_21180 at 102.856 kb on - strand, within CA264_21180 at 102.856 kb on - strand, within CA264_21180 at 102.875 kb on + strand, within CA264_21180 at 102.876 kb on - strand, within CA264_21180 at 102.876 kb on - strand, within CA264_21180 at 102.931 kb on - strand at 102.931 kb on - strand at 102.956 kb on + strand at 103.061 kb on + strand at 103.062 kb on - strand at 103.098 kb on + strand at 103.098 kb on + strand at 103.099 kb on - strand at 103.105 kb on + strand at 103.114 kb on - strand at 103.114 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 100,764 + +0.0 100,767 + +0.1 100,768 - +0.2 100,830 - -0.6 100,838 + -0.3 100,839 - +0.6 100,894 + +0.4 100,894 + -0.1 100,895 - -0.1 100,895 - -0.1 100,895 - +1.2 100,895 - +0.1 100,924 + -0.8 100,933 - -0.4 100,933 - +0.8 100,933 - +0.1 100,941 + +1.3 100,957 + +0.6 100,986 - -0.4 100,995 + -0.0 101,019 - CA264_21170 0.12 +1.5 101,067 - CA264_21170 0.20 +0.2 101,074 + CA264_21170 0.21 -0.4 101,075 - CA264_21170 0.21 -0.4 101,075 - CA264_21170 0.21 +0.2 101,078 + CA264_21170 0.21 -0.4 101,127 - CA264_21170 0.29 -0.9 101,260 + CA264_21170 0.50 -0.7 101,261 - CA264_21170 0.50 -1.6 101,275 - CA264_21170 0.53 +0.5 101,321 + CA264_21170 0.60 -0.3 101,379 - CA264_21170 0.69 -1.4 101,417 + CA264_21170 0.75 +0.6 101,418 - CA264_21170 0.75 -0.0 101,418 - CA264_21170 0.75 -0.0 101,475 + CA264_21170 0.84 +0.2 101,475 + CA264_21170 0.84 +0.8 101,476 - CA264_21170 0.84 -0.0 101,506 + CA264_21170 0.89 +0.1 101,507 - CA264_21170 0.89 -0.4 101,507 - CA264_21170 0.89 +0.1 101,507 - CA264_21170 0.89 +0.3 101,507 - CA264_21170 0.89 +0.0 101,509 + CA264_21170 0.90 -0.8 101,509 + CA264_21170 0.90 -1.0 101,510 - CA264_21170 0.90 -0.3 101,510 - CA264_21170 0.90 -0.3 101,514 + +0.3 101,515 - +0.1 101,515 - -0.6 101,565 + -1.4 101,565 + -1.6 101,575 + +0.7 101,592 + +0.5 101,592 + +0.4 101,592 + -0.9 101,592 + +0.0 101,593 - +0.8 101,593 - +0.3 101,593 - +0.3 101,593 - -0.1 101,593 - -0.2 101,615 + +0.1 101,668 + +0.5 101,668 + -0.4 101,669 - -0.2 101,669 - -1.4 101,669 - -0.4 101,669 - -0.2 101,672 + -0.9 101,713 + -0.6 101,713 + +0.4 101,714 - -0.4 101,714 - +0.8 101,844 + CA264_21175 0.24 -0.6 101,865 + CA264_21175 0.30 +0.5 101,866 - CA264_21175 0.30 -0.0 101,866 - CA264_21175 0.30 -0.0 101,869 - CA264_21175 0.31 +0.7 101,894 + CA264_21175 0.38 -0.8 101,895 - CA264_21175 0.38 -1.2 102,047 - CA264_21175 0.81 +0.2 102,065 + CA264_21175 0.86 -0.9 102,154 + +0.0 102,154 + +0.5 102,155 - -0.5 102,173 - +1.2 102,175 - +0.1 102,180 - -1.4 102,408 + CA264_21180 0.17 +0.4 102,409 - CA264_21180 0.17 +1.1 102,467 + CA264_21180 0.26 -0.1 102,467 + CA264_21180 0.26 +0.3 102,467 + CA264_21180 0.26 +0.1 102,541 - CA264_21180 0.37 +1.2 102,541 - CA264_21180 0.37 +0.7 102,580 + CA264_21180 0.43 -0.6 102,636 + CA264_21180 0.52 +0.9 102,646 - CA264_21180 0.53 -0.8 102,654 + CA264_21180 0.54 -0.7 102,705 + CA264_21180 0.62 +0.1 102,706 - CA264_21180 0.62 +1.5 102,706 - CA264_21180 0.62 +0.2 102,780 - CA264_21180 0.74 -0.4 102,838 - CA264_21180 0.82 -0.3 102,855 + CA264_21180 0.85 -1.0 102,856 - CA264_21180 0.85 -0.1 102,856 - CA264_21180 0.85 -0.3 102,875 + CA264_21180 0.88 -0.3 102,876 - CA264_21180 0.88 -1.1 102,876 - CA264_21180 0.88 -1.0 102,931 - +0.3 102,931 - -0.5 102,956 + +0.9 103,061 + -0.4 103,062 - -0.1 103,098 + +0.7 103,098 + +0.2 103,099 - -0.6 103,105 + -0.4 103,114 - +0.5 103,114 - -0.6
Or see this region's nucleotide sequence