Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20250 and CA264_20255 are separated by 64 nucleotides CA264_20255 and CA264_20260 overlap by 4 nucleotides CA264_20260 and CA264_20265 overlap by 26 nucleotides CA264_20265 and CA264_20270 are separated by 141 nucleotides
CA264_20250: CA264_20250 - transcriptional regulator, at 4,671,815 to 4,672,255
_20250
CA264_20255: CA264_20255 - hypothetical protein, at 4,672,320 to 4,672,859
_20255
CA264_20260: CA264_20260 - hypothetical protein, at 4,672,856 to 4,673,812
_20260
CA264_20265: CA264_20265 - hypothetical protein, at 4,673,787 to 4,674,179
_20265
CA264_20270: CA264_20270 - hypothetical protein, at 4,674,321 to 4,675,253
_20270
Position (kb)
4672
4673
4674 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4671.888 kb on + strand, within CA264_20250 at 4671.963 kb on + strand, within CA264_20250 at 4671.963 kb on + strand, within CA264_20250 at 4671.963 kb on + strand, within CA264_20250 at 4671.964 kb on - strand, within CA264_20250 at 4672.019 kb on - strand, within CA264_20250 at 4672.022 kb on - strand, within CA264_20250 at 4672.039 kb on + strand, within CA264_20250 at 4672.039 kb on + strand, within CA264_20250 at 4672.040 kb on - strand, within CA264_20250 at 4672.104 kb on + strand, within CA264_20250 at 4672.105 kb on - strand, within CA264_20250 at 4672.105 kb on - strand, within CA264_20250 at 4672.159 kb on - strand, within CA264_20250 at 4672.167 kb on + strand, within CA264_20250 at 4672.167 kb on + strand, within CA264_20250 at 4672.191 kb on - strand, within CA264_20250 at 4672.243 kb on - strand at 4672.253 kb on + strand at 4672.282 kb on - strand at 4672.312 kb on + strand at 4672.312 kb on + strand at 4672.313 kb on - strand at 4672.313 kb on - strand at 4672.313 kb on - strand at 4672.313 kb on - strand at 4672.316 kb on + strand at 4672.317 kb on - strand at 4672.321 kb on + strand at 4672.335 kb on + strand at 4672.457 kb on - strand, within CA264_20255 at 4672.457 kb on - strand, within CA264_20255 at 4672.481 kb on + strand, within CA264_20255 at 4672.482 kb on - strand, within CA264_20255 at 4672.509 kb on + strand, within CA264_20255 at 4672.510 kb on - strand, within CA264_20255 at 4672.591 kb on + strand, within CA264_20255 at 4672.628 kb on + strand, within CA264_20255 at 4672.658 kb on - strand, within CA264_20255 at 4672.729 kb on + strand, within CA264_20255 at 4672.730 kb on - strand, within CA264_20255 at 4672.730 kb on - strand, within CA264_20255 at 4672.860 kb on - strand at 4672.976 kb on - strand, within CA264_20260 at 4672.991 kb on - strand, within CA264_20260 at 4673.026 kb on + strand, within CA264_20260 at 4673.026 kb on + strand, within CA264_20260 at 4673.038 kb on + strand, within CA264_20260 at 4673.039 kb on - strand, within CA264_20260 at 4673.113 kb on + strand, within CA264_20260 at 4673.211 kb on + strand, within CA264_20260 at 4673.212 kb on - strand, within CA264_20260 at 4673.212 kb on - strand, within CA264_20260 at 4673.212 kb on - strand, within CA264_20260 at 4673.217 kb on + strand, within CA264_20260 at 4673.376 kb on + strand, within CA264_20260 at 4673.376 kb on + strand, within CA264_20260 at 4673.380 kb on - strand, within CA264_20260 at 4673.461 kb on - strand, within CA264_20260 at 4673.559 kb on + strand, within CA264_20260 at 4673.560 kb on - strand, within CA264_20260 at 4673.713 kb on + strand, within CA264_20260 at 4673.763 kb on + strand at 4673.769 kb on - strand at 4673.824 kb on - strand at 4674.082 kb on - strand, within CA264_20265 at 4674.111 kb on + strand, within CA264_20265 at 4674.157 kb on + strand at 4674.157 kb on + strand at 4674.189 kb on + strand at 4674.297 kb on + strand at 4674.299 kb on + strand at 4674.299 kb on + strand at 4674.379 kb on + strand at 4674.407 kb on - strand at 4674.467 kb on + strand, within CA264_20270 at 4674.495 kb on + strand, within CA264_20270 at 4674.506 kb on + strand, within CA264_20270 at 4674.507 kb on - strand, within CA264_20270 at 4674.558 kb on + strand, within CA264_20270 at 4674.559 kb on - strand, within CA264_20270 at 4674.644 kb on + strand, within CA264_20270 at 4674.645 kb on - strand, within CA264_20270
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,671,888 + CA264_20250 0.17 -0.5 4,671,963 + CA264_20250 0.34 +0.1 4,671,963 + CA264_20250 0.34 +0.2 4,671,963 + CA264_20250 0.34 +1.2 4,671,964 - CA264_20250 0.34 +0.4 4,672,019 - CA264_20250 0.46 -0.3 4,672,022 - CA264_20250 0.47 -0.9 4,672,039 + CA264_20250 0.51 +0.1 4,672,039 + CA264_20250 0.51 +0.3 4,672,040 - CA264_20250 0.51 -0.0 4,672,104 + CA264_20250 0.66 -0.1 4,672,105 - CA264_20250 0.66 +0.1 4,672,105 - CA264_20250 0.66 -0.7 4,672,159 - CA264_20250 0.78 -1.4 4,672,167 + CA264_20250 0.80 -0.7 4,672,167 + CA264_20250 0.80 +0.2 4,672,191 - CA264_20250 0.85 +1.9 4,672,243 - -0.2 4,672,253 + +0.6 4,672,282 - +0.3 4,672,312 + +0.9 4,672,312 + -1.8 4,672,313 - -0.3 4,672,313 - -1.3 4,672,313 - +1.5 4,672,313 - -0.3 4,672,316 + -0.2 4,672,317 - -0.5 4,672,321 + +0.9 4,672,335 + -0.6 4,672,457 - CA264_20255 0.25 +0.0 4,672,457 - CA264_20255 0.25 +0.6 4,672,481 + CA264_20255 0.30 -0.4 4,672,482 - CA264_20255 0.30 -0.2 4,672,509 + CA264_20255 0.35 +0.2 4,672,510 - CA264_20255 0.35 -0.3 4,672,591 + CA264_20255 0.50 +0.6 4,672,628 + CA264_20255 0.57 +0.3 4,672,658 - CA264_20255 0.63 +1.9 4,672,729 + CA264_20255 0.76 +0.1 4,672,730 - CA264_20255 0.76 +0.1 4,672,730 - CA264_20255 0.76 +0.2 4,672,860 - -1.7 4,672,976 - CA264_20260 0.13 +0.5 4,672,991 - CA264_20260 0.14 -0.7 4,673,026 + CA264_20260 0.18 -0.5 4,673,026 + CA264_20260 0.18 -1.0 4,673,038 + CA264_20260 0.19 -0.5 4,673,039 - CA264_20260 0.19 -0.3 4,673,113 + CA264_20260 0.27 +0.2 4,673,211 + CA264_20260 0.37 -0.2 4,673,212 - CA264_20260 0.37 -0.6 4,673,212 - CA264_20260 0.37 -0.3 4,673,212 - CA264_20260 0.37 +0.3 4,673,217 + CA264_20260 0.38 +0.4 4,673,376 + CA264_20260 0.54 +0.8 4,673,376 + CA264_20260 0.54 +0.4 4,673,380 - CA264_20260 0.55 -0.7 4,673,461 - CA264_20260 0.63 +0.1 4,673,559 + CA264_20260 0.73 +0.1 4,673,560 - CA264_20260 0.74 -0.8 4,673,713 + CA264_20260 0.90 -0.2 4,673,763 + +0.4 4,673,769 - +0.5 4,673,824 - +0.5 4,674,082 - CA264_20265 0.75 +0.1 4,674,111 + CA264_20265 0.82 +0.0 4,674,157 + +0.4 4,674,157 + +0.3 4,674,189 + +0.1 4,674,297 + -1.0 4,674,299 + -0.2 4,674,299 + +0.3 4,674,379 + -0.2 4,674,407 - -0.9 4,674,467 + CA264_20270 0.16 +0.0 4,674,495 + CA264_20270 0.19 -1.4 4,674,506 + CA264_20270 0.20 -0.7 4,674,507 - CA264_20270 0.20 -0.6 4,674,558 + CA264_20270 0.25 -0.6 4,674,559 - CA264_20270 0.26 -0.7 4,674,644 + CA264_20270 0.35 +0.2 4,674,645 - CA264_20270 0.35 +0.4
Or see this region's nucleotide sequence