Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20230 and CA264_20235 are separated by 168 nucleotides CA264_20235 and CA264_20240 are separated by 120 nucleotides CA264_20240 and CA264_20245 overlap by 26 nucleotides CA264_20245 and CA264_20250 are separated by 4 nucleotides
CA264_20230: CA264_20230 - hypothetical protein, at 4,669,407 to 4,669,598
_20230
CA264_20235: CA264_20235 - transcriptional regulator, at 4,669,767 to 4,670,159
_20235
CA264_20240: CA264_20240 - hypothetical protein, at 4,670,280 to 4,670,981
_20240
CA264_20245: CA264_20245 - hypothetical protein, at 4,670,956 to 4,671,810
_20245
CA264_20250: CA264_20250 - transcriptional regulator, at 4,671,815 to 4,672,255
_20250
Position (kb)
4670
4671 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4669.315 kb on + strand at 4669.315 kb on + strand at 4669.315 kb on + strand at 4669.316 kb on - strand at 4669.316 kb on - strand at 4669.317 kb on + strand at 4669.317 kb on + strand at 4669.317 kb on + strand at 4669.422 kb on - strand at 4669.422 kb on - strand at 4669.665 kb on + strand at 4669.665 kb on + strand at 4669.665 kb on + strand at 4669.665 kb on + strand at 4669.666 kb on - strand at 4669.666 kb on - strand at 4669.669 kb on + strand at 4669.670 kb on - strand at 4669.670 kb on - strand at 4669.670 kb on - strand at 4669.679 kb on + strand at 4669.679 kb on + strand at 4669.680 kb on - strand at 4669.680 kb on - strand at 4669.680 kb on - strand at 4669.682 kb on - strand at 4669.823 kb on - strand, within CA264_20235 at 4669.833 kb on - strand, within CA264_20235 at 4669.871 kb on + strand, within CA264_20235 at 4669.912 kb on + strand, within CA264_20235 at 4669.916 kb on + strand, within CA264_20235 at 4670.034 kb on + strand, within CA264_20235 at 4670.034 kb on + strand, within CA264_20235 at 4670.035 kb on - strand, within CA264_20235 at 4670.035 kb on - strand, within CA264_20235 at 4670.124 kb on - strand at 4670.132 kb on + strand at 4670.133 kb on - strand at 4670.162 kb on - strand at 4670.171 kb on - strand at 4670.187 kb on + strand at 4670.214 kb on - strand at 4670.261 kb on + strand at 4670.316 kb on - strand at 4670.358 kb on - strand, within CA264_20240 at 4670.378 kb on + strand, within CA264_20240 at 4670.378 kb on + strand, within CA264_20240 at 4670.379 kb on - strand, within CA264_20240 at 4670.388 kb on + strand, within CA264_20240 at 4670.401 kb on + strand, within CA264_20240 at 4670.403 kb on + strand, within CA264_20240 at 4670.403 kb on + strand, within CA264_20240 at 4670.404 kb on - strand, within CA264_20240 at 4670.440 kb on + strand, within CA264_20240 at 4670.628 kb on + strand, within CA264_20240 at 4670.629 kb on - strand, within CA264_20240 at 4670.659 kb on + strand, within CA264_20240 at 4670.659 kb on + strand, within CA264_20240 at 4670.660 kb on - strand, within CA264_20240 at 4670.660 kb on - strand, within CA264_20240 at 4670.664 kb on + strand, within CA264_20240 at 4670.664 kb on + strand, within CA264_20240 at 4670.665 kb on - strand, within CA264_20240 at 4670.769 kb on + strand, within CA264_20240 at 4670.812 kb on - strand, within CA264_20240 at 4670.818 kb on + strand, within CA264_20240 at 4670.819 kb on - strand, within CA264_20240 at 4670.829 kb on + strand, within CA264_20240 at 4670.830 kb on - strand, within CA264_20240 at 4670.862 kb on + strand, within CA264_20240 at 4670.866 kb on - strand, within CA264_20240 at 4670.866 kb on - strand, within CA264_20240 at 4670.900 kb on - strand, within CA264_20240 at 4670.948 kb on + strand at 4670.948 kb on + strand at 4671.032 kb on + strand at 4671.127 kb on + strand, within CA264_20245 at 4671.127 kb on + strand, within CA264_20245 at 4671.146 kb on + strand, within CA264_20245 at 4671.147 kb on - strand, within CA264_20245 at 4671.286 kb on + strand, within CA264_20245 at 4671.320 kb on - strand, within CA264_20245 at 4671.320 kb on - strand, within CA264_20245 at 4671.330 kb on + strand, within CA264_20245 at 4671.341 kb on - strand, within CA264_20245 at 4671.409 kb on + strand, within CA264_20245 at 4671.410 kb on - strand, within CA264_20245 at 4671.430 kb on + strand, within CA264_20245 at 4671.431 kb on - strand, within CA264_20245 at 4671.431 kb on - strand, within CA264_20245 at 4671.475 kb on - strand, within CA264_20245 at 4671.512 kb on - strand, within CA264_20245 at 4671.627 kb on + strand, within CA264_20245 at 4671.685 kb on + strand, within CA264_20245 at 4671.686 kb on - strand, within CA264_20245 at 4671.686 kb on - strand, within CA264_20245 at 4671.705 kb on - strand, within CA264_20245 at 4671.726 kb on - strand at 4671.756 kb on + strand at 4671.756 kb on + strand at 4671.770 kb on + strand at 4671.797 kb on + strand at 4671.803 kb on + strand at 4671.804 kb on - strand at 4671.808 kb on + strand at 4671.809 kb on - strand at 4671.809 kb on - strand at 4671.809 kb on - strand at 4671.809 kb on - strand at 4671.814 kb on + strand at 4671.826 kb on - strand at 4671.826 kb on - strand at 4671.831 kb on + strand at 4671.888 kb on + strand, within CA264_20250 at 4671.963 kb on + strand, within CA264_20250 at 4671.963 kb on + strand, within CA264_20250 at 4671.963 kb on + strand, within CA264_20250 at 4671.964 kb on - strand, within CA264_20250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,669,315 + -0.4 4,669,315 + +0.4 4,669,315 + +0.3 4,669,316 - -0.6 4,669,316 - -0.5 4,669,317 + +0.0 4,669,317 + -0.5 4,669,317 + +0.2 4,669,422 - -0.3 4,669,422 - -0.2 4,669,665 + +0.2 4,669,665 + +0.1 4,669,665 + -1.7 4,669,665 + -0.2 4,669,666 - -0.0 4,669,666 - -0.2 4,669,669 + +0.0 4,669,670 - -0.2 4,669,670 - -0.5 4,669,670 - +0.1 4,669,679 + -0.5 4,669,679 + +1.3 4,669,680 - -0.0 4,669,680 - +2.9 4,669,680 - +1.2 4,669,682 - +0.4 4,669,823 - CA264_20235 0.14 -0.7 4,669,833 - CA264_20235 0.17 +0.5 4,669,871 + CA264_20235 0.26 +1.0 4,669,912 + CA264_20235 0.37 -0.6 4,669,916 + CA264_20235 0.38 -2.3 4,670,034 + CA264_20235 0.68 -0.1 4,670,034 + CA264_20235 0.68 +0.2 4,670,035 - CA264_20235 0.68 +1.1 4,670,035 - CA264_20235 0.68 -0.1 4,670,124 - -0.4 4,670,132 + +0.5 4,670,133 - -0.3 4,670,162 - -0.1 4,670,171 - +1.5 4,670,187 + -0.6 4,670,214 - +0.2 4,670,261 + -0.4 4,670,316 - -1.2 4,670,358 - CA264_20240 0.11 -0.8 4,670,378 + CA264_20240 0.14 +0.3 4,670,378 + CA264_20240 0.14 -0.8 4,670,379 - CA264_20240 0.14 -0.6 4,670,388 + CA264_20240 0.15 -0.4 4,670,401 + CA264_20240 0.17 -1.1 4,670,403 + CA264_20240 0.18 -0.3 4,670,403 + CA264_20240 0.18 -0.2 4,670,404 - CA264_20240 0.18 -0.7 4,670,440 + CA264_20240 0.23 -1.8 4,670,628 + CA264_20240 0.50 +0.2 4,670,629 - CA264_20240 0.50 -0.9 4,670,659 + CA264_20240 0.54 -0.1 4,670,659 + CA264_20240 0.54 -0.1 4,670,660 - CA264_20240 0.54 -0.1 4,670,660 - CA264_20240 0.54 -0.3 4,670,664 + CA264_20240 0.55 +0.8 4,670,664 + CA264_20240 0.55 -0.7 4,670,665 - CA264_20240 0.55 -0.2 4,670,769 + CA264_20240 0.70 +1.5 4,670,812 - CA264_20240 0.76 -0.3 4,670,818 + CA264_20240 0.77 -0.7 4,670,819 - CA264_20240 0.77 -1.4 4,670,829 + CA264_20240 0.78 +1.5 4,670,830 - CA264_20240 0.78 +0.1 4,670,862 + CA264_20240 0.83 -0.6 4,670,866 - CA264_20240 0.83 -0.4 4,670,866 - CA264_20240 0.83 -1.2 4,670,900 - CA264_20240 0.88 +1.3 4,670,948 + +0.0 4,670,948 + -0.2 4,671,032 + -1.3 4,671,127 + CA264_20245 0.20 -0.7 4,671,127 + CA264_20245 0.20 -0.2 4,671,146 + CA264_20245 0.22 +1.9 4,671,147 - CA264_20245 0.22 -0.3 4,671,286 + CA264_20245 0.39 -1.7 4,671,320 - CA264_20245 0.43 -0.4 4,671,320 - CA264_20245 0.43 +0.1 4,671,330 + CA264_20245 0.44 -0.3 4,671,341 - CA264_20245 0.45 +0.2 4,671,409 + CA264_20245 0.53 -0.6 4,671,410 - CA264_20245 0.53 +2.0 4,671,430 + CA264_20245 0.55 +0.4 4,671,431 - CA264_20245 0.56 -0.4 4,671,431 - CA264_20245 0.56 +1.7 4,671,475 - CA264_20245 0.61 -0.5 4,671,512 - CA264_20245 0.65 -0.1 4,671,627 + CA264_20245 0.78 -0.2 4,671,685 + CA264_20245 0.85 -0.2 4,671,686 - CA264_20245 0.85 +0.7 4,671,686 - CA264_20245 0.85 +0.8 4,671,705 - CA264_20245 0.88 -0.2 4,671,726 - -0.4 4,671,756 + -0.2 4,671,756 + -0.5 4,671,770 + +0.1 4,671,797 + -0.5 4,671,803 + -0.3 4,671,804 - +0.8 4,671,808 + -0.0 4,671,809 - -0.7 4,671,809 - +0.6 4,671,809 - +1.2 4,671,809 - +0.1 4,671,814 + +0.5 4,671,826 - -0.5 4,671,826 - -0.4 4,671,831 + -0.4 4,671,888 + CA264_20250 0.17 -0.5 4,671,963 + CA264_20250 0.34 +0.1 4,671,963 + CA264_20250 0.34 +0.2 4,671,963 + CA264_20250 0.34 +1.2 4,671,964 - CA264_20250 0.34 +0.4
Or see this region's nucleotide sequence