Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19120 and CA264_19125 are separated by 315 nucleotides CA264_19125 and CA264_19130 are separated by 72 nucleotides CA264_19130 and CA264_19135 are separated by 51 nucleotides CA264_19135 and CA264_19140 are separated by 47 nucleotides
CA264_19120: CA264_19120 - B12-binding domain-containing radical SAM protein, at 4,444,075 to 4,446,276
_19120
CA264_19125: CA264_19125 - hypothetical protein, at 4,446,592 to 4,446,891
_19125
CA264_19130: CA264_19130 - DUF2798 domain-containing protein, at 4,446,964 to 4,447,191
_19130
CA264_19135: CA264_19135 - hypothetical protein, at 4,447,243 to 4,447,527
_19135
CA264_19140: CA264_19140 - hypothetical protein, at 4,447,575 to 4,447,883
_19140
Position (kb)
4446
4447 Strain fitness (log2 ratio)
-2
-1
0
1 at 4445.592 kb on - strand, within CA264_19120 at 4445.703 kb on + strand, within CA264_19120 at 4445.704 kb on - strand, within CA264_19120 at 4445.801 kb on + strand, within CA264_19120 at 4445.801 kb on + strand, within CA264_19120 at 4445.802 kb on - strand, within CA264_19120 at 4445.834 kb on - strand, within CA264_19120 at 4445.846 kb on + strand, within CA264_19120 at 4445.847 kb on - strand, within CA264_19120 at 4445.847 kb on - strand, within CA264_19120 at 4445.847 kb on - strand, within CA264_19120 at 4445.848 kb on + strand, within CA264_19120 at 4445.955 kb on - strand, within CA264_19120 at 4445.959 kb on + strand, within CA264_19120 at 4446.260 kb on - strand at 4446.262 kb on - strand at 4446.262 kb on - strand at 4446.262 kb on - strand at 4446.262 kb on - strand at 4446.280 kb on - strand at 4446.284 kb on - strand at 4446.292 kb on - strand at 4446.348 kb on - strand at 4446.421 kb on - strand at 4446.421 kb on - strand at 4446.423 kb on - strand at 4446.435 kb on - strand at 4446.439 kb on - strand at 4446.439 kb on - strand at 4446.533 kb on + strand at 4446.534 kb on - strand at 4446.574 kb on - strand at 4446.628 kb on + strand, within CA264_19125 at 4446.662 kb on - strand, within CA264_19125 at 4446.886 kb on - strand at 4446.886 kb on - strand at 4446.893 kb on - strand at 4446.893 kb on - strand at 4446.893 kb on - strand at 4446.893 kb on - strand at 4446.920 kb on + strand at 4446.965 kb on + strand at 4446.992 kb on + strand, within CA264_19130 at 4446.992 kb on + strand, within CA264_19130 at 4446.993 kb on - strand, within CA264_19130 at 4446.993 kb on - strand, within CA264_19130 at 4447.098 kb on + strand, within CA264_19130 at 4447.098 kb on + strand, within CA264_19130 at 4447.100 kb on + strand, within CA264_19130 at 4447.441 kb on + strand, within CA264_19135 at 4447.451 kb on + strand, within CA264_19135 at 4447.453 kb on - strand, within CA264_19135 at 4447.505 kb on + strand at 4447.505 kb on + strand at 4447.510 kb on - strand at 4447.575 kb on - strand at 4447.595 kb on + strand at 4447.596 kb on - strand at 4447.597 kb on + strand at 4447.597 kb on + strand at 4447.598 kb on - strand at 4447.598 kb on - strand at 4447.601 kb on + strand at 4447.601 kb on + strand at 4447.601 kb on + strand at 4447.607 kb on - strand, within CA264_19140 at 4447.607 kb on - strand, within CA264_19140 at 4447.715 kb on - strand, within CA264_19140 at 4447.737 kb on - strand, within CA264_19140 at 4447.770 kb on + strand, within CA264_19140 at 4447.771 kb on - strand, within CA264_19140 at 4447.771 kb on - strand, within CA264_19140 at 4447.774 kb on - strand, within CA264_19140 at 4447.837 kb on - strand, within CA264_19140 at 4447.837 kb on - strand, within CA264_19140 at 4447.882 kb on - strand at 4447.882 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,445,592 - CA264_19120 0.69 -0.6 4,445,703 + CA264_19120 0.74 +0.2 4,445,704 - CA264_19120 0.74 -0.4 4,445,801 + CA264_19120 0.78 -0.4 4,445,801 + CA264_19120 0.78 -1.5 4,445,802 - CA264_19120 0.78 +0.7 4,445,834 - CA264_19120 0.80 +1.1 4,445,846 + CA264_19120 0.80 -0.1 4,445,847 - CA264_19120 0.80 -0.7 4,445,847 - CA264_19120 0.80 -0.8 4,445,847 - CA264_19120 0.80 -0.2 4,445,848 + CA264_19120 0.81 -0.8 4,445,955 - CA264_19120 0.85 +0.8 4,445,959 + CA264_19120 0.86 +0.7 4,446,260 - +0.5 4,446,262 - +0.9 4,446,262 - -0.8 4,446,262 - +0.0 4,446,262 - +0.2 4,446,280 - -0.4 4,446,284 - -0.6 4,446,292 - +0.2 4,446,348 - -0.6 4,446,421 - -1.0 4,446,421 - -0.2 4,446,423 - -0.7 4,446,435 - -0.4 4,446,439 - -0.3 4,446,439 - -0.3 4,446,533 + +0.9 4,446,534 - -0.2 4,446,574 - +0.1 4,446,628 + CA264_19125 0.12 -0.3 4,446,662 - CA264_19125 0.23 +0.3 4,446,886 - -0.0 4,446,886 - +0.6 4,446,893 - +0.9 4,446,893 - +0.1 4,446,893 - -0.3 4,446,893 - +0.2 4,446,920 + -0.1 4,446,965 + -0.4 4,446,992 + CA264_19130 0.12 +0.4 4,446,992 + CA264_19130 0.12 -1.1 4,446,993 - CA264_19130 0.13 -0.5 4,446,993 - CA264_19130 0.13 -0.2 4,447,098 + CA264_19130 0.59 -0.3 4,447,098 + CA264_19130 0.59 +1.5 4,447,100 + CA264_19130 0.60 -0.6 4,447,441 + CA264_19135 0.69 +0.3 4,447,451 + CA264_19135 0.73 +0.0 4,447,453 - CA264_19135 0.74 +0.0 4,447,505 + -1.9 4,447,505 + +0.5 4,447,510 - -0.1 4,447,575 - -1.0 4,447,595 + +1.1 4,447,596 - +0.9 4,447,597 + -0.3 4,447,597 + -0.1 4,447,598 - -0.3 4,447,598 - -0.5 4,447,601 + -0.1 4,447,601 + -0.7 4,447,601 + -0.6 4,447,607 - CA264_19140 0.10 +0.0 4,447,607 - CA264_19140 0.10 +0.5 4,447,715 - CA264_19140 0.45 +0.1 4,447,737 - CA264_19140 0.52 -0.2 4,447,770 + CA264_19140 0.63 -0.7 4,447,771 - CA264_19140 0.63 -0.3 4,447,771 - CA264_19140 0.63 -0.1 4,447,774 - CA264_19140 0.64 -0.2 4,447,837 - CA264_19140 0.85 -0.1 4,447,837 - CA264_19140 0.85 -0.7 4,447,882 - +0.1 4,447,882 - +0.2
Or see this region's nucleotide sequence