Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18630 and CA264_18635 are separated by 36 nucleotides CA264_18635 and CA264_18640 are separated by 83 nucleotides CA264_18640 and CA264_18645 are separated by 145 nucleotides
CA264_18630: CA264_18630 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase, at 4,332,090 to 4,333,613
_18630
CA264_18635: CA264_18635 - phosphoribosylglycinamide formyltransferase, at 4,333,650 to 4,334,237
_18635
CA264_18640: CA264_18640 - ATPase, at 4,334,321 to 4,334,704
_18640
CA264_18645: CA264_18645 - haloacid dehalogenase, at 4,334,850 to 4,335,674
_18645
Position (kb)
4333
4334
4335 Strain fitness (log2 ratio)
-1
0
1 at 4332.760 kb on + strand, within CA264_18630 at 4332.938 kb on - strand, within CA264_18630 at 4332.993 kb on + strand, within CA264_18630 at 4333.144 kb on - strand, within CA264_18630 at 4333.147 kb on - strand, within CA264_18630 at 4333.147 kb on - strand, within CA264_18630 at 4333.333 kb on + strand, within CA264_18630 at 4333.430 kb on + strand, within CA264_18630 at 4333.455 kb on + strand, within CA264_18630 at 4333.513 kb on + strand at 4333.513 kb on + strand at 4333.513 kb on + strand at 4333.514 kb on - strand at 4333.514 kb on - strand at 4333.573 kb on + strand at 4333.637 kb on - strand at 4333.651 kb on + strand at 4333.678 kb on - strand at 4333.807 kb on + strand, within CA264_18635 at 4333.891 kb on + strand, within CA264_18635 at 4333.891 kb on + strand, within CA264_18635 at 4333.892 kb on - strand, within CA264_18635 at 4333.892 kb on - strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4334.102 kb on - strand, within CA264_18635 at 4334.228 kb on + strand at 4334.229 kb on - strand at 4334.252 kb on - strand at 4334.267 kb on - strand at 4334.276 kb on + strand at 4334.283 kb on + strand at 4334.284 kb on - strand at 4334.284 kb on - strand at 4334.304 kb on + strand at 4334.304 kb on + strand at 4334.358 kb on + strand at 4334.440 kb on - strand, within CA264_18640 at 4334.590 kb on + strand, within CA264_18640 at 4334.652 kb on + strand, within CA264_18640 at 4334.652 kb on + strand, within CA264_18640 at 4334.682 kb on + strand at 4334.685 kb on + strand at 4334.712 kb on + strand at 4334.712 kb on + strand at 4334.713 kb on - strand at 4334.713 kb on - strand at 4334.722 kb on + strand at 4334.722 kb on + strand at 4334.723 kb on - strand at 4334.723 kb on - strand at 4334.733 kb on + strand at 4334.734 kb on - strand at 4334.777 kb on + strand at 4334.780 kb on - strand at 4334.804 kb on + strand at 4334.804 kb on + strand at 4334.809 kb on + strand at 4334.809 kb on + strand at 4334.832 kb on - strand at 4334.834 kb on + strand at 4334.838 kb on + strand at 4334.839 kb on - strand at 4334.839 kb on - strand at 4334.839 kb on - strand at 4334.839 kb on - strand at 4334.869 kb on - strand at 4334.870 kb on + strand at 4334.871 kb on - strand at 4334.880 kb on + strand at 4334.892 kb on + strand at 4334.892 kb on + strand at 4334.892 kb on + strand at 4334.986 kb on - strand, within CA264_18645 at 4334.986 kb on - strand, within CA264_18645 at 4334.995 kb on + strand, within CA264_18645 at 4334.996 kb on - strand, within CA264_18645 at 4335.035 kb on + strand, within CA264_18645 at 4335.036 kb on - strand, within CA264_18645 at 4335.104 kb on - strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.143 kb on - strand, within CA264_18645 at 4335.143 kb on - strand, within CA264_18645
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 4,332,760 + CA264_18630 0.44 -0.9 4,332,938 - CA264_18630 0.56 -0.9 4,332,993 + CA264_18630 0.59 -0.8 4,333,144 - CA264_18630 0.69 -1.0 4,333,147 - CA264_18630 0.69 -0.3 4,333,147 - CA264_18630 0.69 -0.2 4,333,333 + CA264_18630 0.82 -0.8 4,333,430 + CA264_18630 0.88 -1.3 4,333,455 + CA264_18630 0.90 -0.5 4,333,513 + +1.3 4,333,513 + +0.3 4,333,513 + -0.6 4,333,514 - -0.1 4,333,514 - +0.5 4,333,573 + -1.6 4,333,637 - +0.0 4,333,651 + +0.1 4,333,678 - -0.9 4,333,807 + CA264_18635 0.27 +0.2 4,333,891 + CA264_18635 0.41 -0.1 4,333,891 + CA264_18635 0.41 -0.2 4,333,892 - CA264_18635 0.41 -1.1 4,333,892 - CA264_18635 0.41 -0.1 4,333,914 + CA264_18635 0.45 +0.6 4,333,914 + CA264_18635 0.45 -0.1 4,333,914 + CA264_18635 0.45 -0.3 4,333,914 + CA264_18635 0.45 +0.4 4,334,102 - CA264_18635 0.77 +0.4 4,334,228 + -0.5 4,334,229 - +1.0 4,334,252 - -0.3 4,334,267 - -0.2 4,334,276 + -0.3 4,334,283 + -0.2 4,334,284 - +1.3 4,334,284 - +0.2 4,334,304 + -0.4 4,334,304 + +0.5 4,334,358 + -0.0 4,334,440 - CA264_18640 0.31 -0.7 4,334,590 + CA264_18640 0.70 -0.2 4,334,652 + CA264_18640 0.86 +0.2 4,334,652 + CA264_18640 0.86 +0.7 4,334,682 + -0.5 4,334,685 + -0.1 4,334,712 + +0.2 4,334,712 + -0.2 4,334,713 - -0.1 4,334,713 - -0.4 4,334,722 + -0.4 4,334,722 + -0.1 4,334,723 - -0.6 4,334,723 - +0.4 4,334,733 + +0.1 4,334,734 - +0.1 4,334,777 + -0.0 4,334,780 - -0.4 4,334,804 + -0.8 4,334,804 + -0.3 4,334,809 + -0.1 4,334,809 + +0.3 4,334,832 - -0.0 4,334,834 + -0.4 4,334,838 + +0.0 4,334,839 - -0.4 4,334,839 - -0.1 4,334,839 - +0.6 4,334,839 - +0.2 4,334,869 - -0.3 4,334,870 + +0.1 4,334,871 - -0.3 4,334,880 + +1.2 4,334,892 + +0.9 4,334,892 + -1.5 4,334,892 + -1.0 4,334,986 - CA264_18645 0.16 +0.6 4,334,986 - CA264_18645 0.16 -0.5 4,334,995 + CA264_18645 0.18 +0.5 4,334,996 - CA264_18645 0.18 +0.2 4,335,035 + CA264_18645 0.22 -0.4 4,335,036 - CA264_18645 0.23 -0.3 4,335,104 - CA264_18645 0.31 +0.7 4,335,142 + CA264_18645 0.35 +0.3 4,335,142 + CA264_18645 0.35 -0.5 4,335,142 + CA264_18645 0.35 -0.1 4,335,142 + CA264_18645 0.35 -1.4 4,335,142 + CA264_18645 0.35 +0.3 4,335,143 - CA264_18645 0.36 -0.4 4,335,143 - CA264_18645 0.36 -0.3
Or see this region's nucleotide sequence