Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14900 and CA264_14905 are separated by 494 nucleotides
CA264_14900: CA264_14900 - uvrA paralog in Bacteroidetes (from data) , at 3,501,208 to 3,504,015
_14900
CA264_14905: CA264_14905 - hypothetical protein, at 3,504,510 to 3,505,532
_14905
Position (kb)
3501
3502
3503
3504
3505 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3500.214 kb on + strand at 3500.228 kb on + strand at 3500.272 kb on + strand at 3500.273 kb on - strand at 3500.274 kb on + strand at 3500.275 kb on - strand at 3500.286 kb on + strand at 3500.286 kb on + strand at 3500.293 kb on + strand at 3500.299 kb on - strand at 3500.313 kb on + strand at 3500.314 kb on - strand at 3500.314 kb on - strand at 3500.329 kb on - strand at 3500.359 kb on + strand at 3500.359 kb on + strand at 3500.360 kb on - strand at 3500.360 kb on - strand at 3500.420 kb on - strand at 3500.430 kb on + strand at 3500.434 kb on + strand at 3500.434 kb on + strand at 3500.435 kb on - strand at 3500.435 kb on - strand at 3500.440 kb on + strand at 3500.479 kb on - strand at 3500.484 kb on - strand at 3500.500 kb on + strand at 3500.501 kb on - strand at 3500.501 kb on - strand at 3500.501 kb on - strand at 3500.501 kb on - strand at 3500.505 kb on + strand at 3500.532 kb on + strand at 3500.532 kb on + strand at 3500.532 kb on + strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.533 kb on - strand at 3500.548 kb on - strand at 3500.573 kb on - strand at 3500.578 kb on - strand at 3500.622 kb on + strand at 3500.622 kb on + strand at 3500.650 kb on + strand at 3500.654 kb on + strand at 3500.663 kb on - strand at 3500.673 kb on - strand at 3500.677 kb on + strand at 3500.677 kb on + strand at 3500.752 kb on + strand at 3500.753 kb on - strand at 3500.773 kb on - strand at 3500.782 kb on + strand at 3500.805 kb on - strand at 3500.889 kb on - strand at 3500.911 kb on + strand at 3500.967 kb on - strand at 3500.979 kb on - strand at 3500.982 kb on + strand at 3500.983 kb on - strand at 3500.985 kb on - strand at 3500.986 kb on + strand at 3500.986 kb on + strand at 3500.987 kb on - strand at 3501.026 kb on + strand at 3501.050 kb on + strand at 3501.084 kb on - strand at 3501.108 kb on - strand at 3501.154 kb on + strand at 3501.154 kb on + strand at 3501.155 kb on - strand at 3501.156 kb on + strand at 3501.157 kb on - strand at 3501.157 kb on - strand at 3501.157 kb on - strand at 3501.158 kb on + strand at 3501.198 kb on + strand at 3501.200 kb on + strand at 3501.201 kb on - strand at 3501.325 kb on + strand at 3501.381 kb on + strand at 3501.582 kb on - strand, within CA264_14900 at 3501.775 kb on - strand, within CA264_14900 at 3501.814 kb on + strand, within CA264_14900 at 3501.903 kb on + strand, within CA264_14900 at 3501.930 kb on - strand, within CA264_14900 at 3501.930 kb on - strand, within CA264_14900 at 3502.005 kb on - strand, within CA264_14900 at 3502.483 kb on + strand, within CA264_14900 at 3502.486 kb on - strand, within CA264_14900 at 3502.486 kb on - strand, within CA264_14900 at 3502.486 kb on - strand, within CA264_14900 at 3502.486 kb on - strand, within CA264_14900 at 3502.540 kb on - strand, within CA264_14900 at 3502.629 kb on - strand, within CA264_14900 at 3502.674 kb on + strand, within CA264_14900 at 3502.674 kb on + strand, within CA264_14900 at 3502.718 kb on - strand, within CA264_14900 at 3502.772 kb on - strand, within CA264_14900 at 3502.772 kb on - strand, within CA264_14900 at 3502.772 kb on - strand, within CA264_14900 at 3502.775 kb on + strand, within CA264_14900 at 3502.776 kb on - strand, within CA264_14900 at 3502.916 kb on + strand, within CA264_14900 at 3502.967 kb on + strand, within CA264_14900 at 3503.070 kb on - strand, within CA264_14900 at 3503.070 kb on - strand, within CA264_14900 at 3503.111 kb on - strand, within CA264_14900 at 3503.111 kb on - strand, within CA264_14900 at 3503.167 kb on - strand, within CA264_14900 at 3503.342 kb on + strand, within CA264_14900 at 3503.365 kb on + strand, within CA264_14900 at 3503.365 kb on + strand, within CA264_14900 at 3503.366 kb on - strand, within CA264_14900 at 3503.367 kb on + strand, within CA264_14900 at 3503.368 kb on - strand, within CA264_14900 at 3503.371 kb on + strand, within CA264_14900 at 3503.418 kb on + strand, within CA264_14900 at 3503.423 kb on + strand, within CA264_14900 at 3503.423 kb on + strand, within CA264_14900 at 3503.424 kb on - strand, within CA264_14900 at 3503.425 kb on + strand, within CA264_14900 at 3503.559 kb on + strand, within CA264_14900 at 3503.593 kb on + strand, within CA264_14900 at 3503.594 kb on - strand, within CA264_14900 at 3503.597 kb on - strand, within CA264_14900 at 3503.619 kb on - strand, within CA264_14900 at 3503.655 kb on - strand, within CA264_14900 at 3503.661 kb on - strand, within CA264_14900 at 3503.701 kb on - strand, within CA264_14900 at 3503.707 kb on + strand, within CA264_14900 at 3503.708 kb on - strand, within CA264_14900 at 3503.816 kb on + strand at 3503.956 kb on + strand at 3503.958 kb on + strand at 3503.959 kb on - strand at 3503.959 kb on - strand at 3503.980 kb on + strand at 3504.015 kb on + strand at 3504.043 kb on + strand at 3504.044 kb on - strand at 3504.044 kb on - strand at 3504.046 kb on + strand at 3504.080 kb on + strand at 3504.088 kb on - strand at 3504.093 kb on + strand at 3504.093 kb on + strand at 3504.100 kb on - strand at 3504.103 kb on + strand at 3504.134 kb on - strand at 3504.197 kb on - strand at 3504.197 kb on - strand at 3504.240 kb on - strand at 3504.250 kb on + strand at 3504.306 kb on - strand at 3504.307 kb on + strand at 3504.307 kb on + strand at 3504.307 kb on + strand at 3504.308 kb on - strand at 3504.505 kb on + strand at 3504.521 kb on + strand at 3504.522 kb on - strand at 3504.530 kb on + strand at 3504.530 kb on + strand at 3504.530 kb on + strand at 3504.531 kb on - strand at 3504.542 kb on - strand at 3504.609 kb on + strand at 3504.623 kb on + strand, within CA264_14905 at 3504.676 kb on + strand, within CA264_14905 at 3504.723 kb on - strand, within CA264_14905 at 3504.723 kb on - strand, within CA264_14905
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,500,214 + -0.8 3,500,228 + +1.1 3,500,272 + -0.9 3,500,273 - +0.1 3,500,274 + -0.4 3,500,275 - -0.9 3,500,286 + -0.4 3,500,286 + +0.7 3,500,293 + -0.3 3,500,299 - -0.3 3,500,313 + +0.1 3,500,314 - +0.0 3,500,314 - +0.3 3,500,329 - -1.2 3,500,359 + -0.5 3,500,359 + -0.0 3,500,360 - -0.2 3,500,360 - -0.9 3,500,420 - -0.7 3,500,430 + -0.3 3,500,434 + +0.2 3,500,434 + -0.2 3,500,435 - +0.0 3,500,435 - -0.2 3,500,440 + -0.3 3,500,479 - -0.3 3,500,484 - -0.9 3,500,500 + -0.5 3,500,501 - -1.0 3,500,501 - -0.1 3,500,501 - +0.2 3,500,501 - -0.4 3,500,505 + +0.0 3,500,532 + -0.5 3,500,532 + -0.3 3,500,532 + -0.4 3,500,533 - -0.3 3,500,533 - -0.1 3,500,533 - -0.9 3,500,533 - +0.1 3,500,533 - -1.4 3,500,548 - -0.1 3,500,573 - -0.4 3,500,578 - -0.2 3,500,622 + +0.5 3,500,622 + -0.2 3,500,650 + -0.1 3,500,654 + +0.2 3,500,663 - -0.3 3,500,673 - -2.2 3,500,677 + +0.4 3,500,677 + +0.7 3,500,752 + -0.3 3,500,753 - -0.7 3,500,773 - -1.1 3,500,782 + +1.4 3,500,805 - +0.1 3,500,889 - -0.2 3,500,911 + -0.2 3,500,967 - -0.3 3,500,979 - +0.2 3,500,982 + +0.5 3,500,983 - +0.0 3,500,985 - -0.1 3,500,986 + -0.9 3,500,986 + -1.3 3,500,987 - +0.0 3,501,026 + -0.8 3,501,050 + -0.3 3,501,084 - +0.2 3,501,108 - -0.1 3,501,154 + -0.2 3,501,154 + -0.3 3,501,155 - +0.0 3,501,156 + -0.7 3,501,157 - -0.2 3,501,157 - -0.2 3,501,157 - -0.4 3,501,158 + -1.1 3,501,198 + +0.2 3,501,200 + -0.7 3,501,201 - -0.0 3,501,325 + -0.9 3,501,381 + -1.0 3,501,582 - CA264_14900 0.13 -0.9 3,501,775 - CA264_14900 0.20 -0.9 3,501,814 + CA264_14900 0.22 +0.1 3,501,903 + CA264_14900 0.25 -0.5 3,501,930 - CA264_14900 0.26 +1.5 3,501,930 - CA264_14900 0.26 -1.1 3,502,005 - CA264_14900 0.28 -1.1 3,502,483 + CA264_14900 0.45 -0.7 3,502,486 - CA264_14900 0.46 -1.0 3,502,486 - CA264_14900 0.46 -1.1 3,502,486 - CA264_14900 0.46 -1.1 3,502,486 - CA264_14900 0.46 -1.1 3,502,540 - CA264_14900 0.47 -0.0 3,502,629 - CA264_14900 0.51 -1.4 3,502,674 + CA264_14900 0.52 -1.9 3,502,674 + CA264_14900 0.52 -0.9 3,502,718 - CA264_14900 0.54 +0.1 3,502,772 - CA264_14900 0.56 -0.6 3,502,772 - CA264_14900 0.56 -0.8 3,502,772 - CA264_14900 0.56 -0.6 3,502,775 + CA264_14900 0.56 -1.4 3,502,776 - CA264_14900 0.56 +0.0 3,502,916 + CA264_14900 0.61 -0.4 3,502,967 + CA264_14900 0.63 +1.0 3,503,070 - CA264_14900 0.66 -0.8 3,503,070 - CA264_14900 0.66 -0.8 3,503,111 - CA264_14900 0.68 +0.3 3,503,111 - CA264_14900 0.68 -0.6 3,503,167 - CA264_14900 0.70 -3.1 3,503,342 + CA264_14900 0.76 +0.5 3,503,365 + CA264_14900 0.77 +0.3 3,503,365 + CA264_14900 0.77 +0.7 3,503,366 - CA264_14900 0.77 -0.9 3,503,367 + CA264_14900 0.77 -0.6 3,503,368 - CA264_14900 0.77 -1.0 3,503,371 + CA264_14900 0.77 -0.5 3,503,418 + CA264_14900 0.79 +0.3 3,503,423 + CA264_14900 0.79 +0.0 3,503,423 + CA264_14900 0.79 -1.6 3,503,424 - CA264_14900 0.79 -1.5 3,503,425 + CA264_14900 0.79 +0.1 3,503,559 + CA264_14900 0.84 -1.4 3,503,593 + CA264_14900 0.85 -1.2 3,503,594 - CA264_14900 0.85 -0.9 3,503,597 - CA264_14900 0.85 -1.8 3,503,619 - CA264_14900 0.86 -1.7 3,503,655 - CA264_14900 0.87 -0.8 3,503,661 - CA264_14900 0.87 -1.0 3,503,701 - CA264_14900 0.89 -0.8 3,503,707 + CA264_14900 0.89 -0.3 3,503,708 - CA264_14900 0.89 -0.2 3,503,816 + -0.1 3,503,956 + -1.7 3,503,958 + -0.3 3,503,959 - -0.6 3,503,959 - +0.9 3,503,980 + +0.1 3,504,015 + +0.9 3,504,043 + -0.4 3,504,044 - +2.5 3,504,044 - -0.4 3,504,046 + +0.1 3,504,080 + +0.2 3,504,088 - +1.7 3,504,093 + +1.2 3,504,093 + -0.1 3,504,100 - -0.6 3,504,103 + -0.3 3,504,134 - +0.7 3,504,197 - -0.5 3,504,197 - +0.5 3,504,240 - -0.4 3,504,250 + +0.4 3,504,306 - +0.1 3,504,307 + +0.0 3,504,307 + +1.0 3,504,307 + -1.2 3,504,308 - -0.2 3,504,505 + +0.3 3,504,521 + -1.0 3,504,522 - +1.5 3,504,530 + +0.9 3,504,530 + -0.7 3,504,530 + -0.5 3,504,531 - +0.5 3,504,542 - +0.6 3,504,609 + -0.8 3,504,623 + CA264_14905 0.11 -0.3 3,504,676 + CA264_14905 0.16 -0.1 3,504,723 - CA264_14905 0.21 -1.0 3,504,723 - CA264_14905 0.21 +0.6
Or see this region's nucleotide sequence