Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13730 and CA264_13735 are separated by 78 nucleotides CA264_13735 and CA264_13740 are separated by 11 nucleotides CA264_13740 and CA264_13745 are separated by 266 nucleotides
CA264_13730: CA264_13730 - hypothetical protein, at 3,208,672 to 3,209,214
_13730
CA264_13735: CA264_13735 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 3,209,293 to 3,210,186
_13735
CA264_13740: CA264_13740 - cytidylate kinase, at 3,210,198 to 3,210,902
_13740
CA264_13745: CA264_13745 - adenine deaminase, at 3,211,169 to 3,212,803
_13745
Position (kb)
3210
3211 Strain fitness (log2 ratio)
-2
-1
0
1 at 3209.217 kb on + strand at 3209.217 kb on + strand at 3209.261 kb on + strand at 3209.262 kb on - strand at 3209.275 kb on - strand at 3209.321 kb on - strand at 3209.322 kb on + strand at 3209.323 kb on - strand at 3209.323 kb on - strand at 3209.323 kb on - strand at 3210.178 kb on + strand at 3210.925 kb on + strand at 3210.925 kb on + strand at 3210.982 kb on - strand at 3211.074 kb on - strand at 3211.106 kb on + strand at 3211.114 kb on - strand at 3211.150 kb on - strand at 3211.169 kb on - strand at 3211.169 kb on - strand at 3211.209 kb on + strand at 3211.209 kb on + strand at 3211.213 kb on + strand at 3211.213 kb on + strand at 3211.213 kb on + strand at 3211.214 kb on - strand at 3211.214 kb on - strand at 3211.298 kb on + strand at 3211.329 kb on + strand at 3211.329 kb on + strand at 3211.329 kb on + strand at 3211.440 kb on + strand, within CA264_13745 at 3211.440 kb on + strand, within CA264_13745 at 3211.441 kb on - strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.455 kb on - strand, within CA264_13745 at 3211.455 kb on - strand, within CA264_13745 at 3211.598 kb on + strand, within CA264_13745 at 3211.680 kb on - strand, within CA264_13745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,209,217 + +0.1 3,209,217 + -0.1 3,209,261 + +0.0 3,209,262 - -0.6 3,209,275 - +0.2 3,209,321 - +0.2 3,209,322 + -0.4 3,209,323 - +0.2 3,209,323 - -0.0 3,209,323 - -0.0 3,210,178 + -0.2 3,210,925 + +1.2 3,210,925 + -0.0 3,210,982 - +0.0 3,211,074 - +0.5 3,211,106 + +0.9 3,211,114 - -0.2 3,211,150 - +0.4 3,211,169 - -0.2 3,211,169 - -0.1 3,211,209 + -0.1 3,211,209 + +0.7 3,211,213 + -0.7 3,211,213 + -0.1 3,211,213 + -2.3 3,211,214 - +0.6 3,211,214 - +0.7 3,211,298 + -0.2 3,211,329 + +0.4 3,211,329 + -1.4 3,211,329 + +0.5 3,211,440 + CA264_13745 0.17 -1.0 3,211,440 + CA264_13745 0.17 -0.7 3,211,441 - CA264_13745 0.17 -0.2 3,211,454 + CA264_13745 0.17 -1.5 3,211,454 + CA264_13745 0.17 -1.4 3,211,454 + CA264_13745 0.17 -0.1 3,211,455 - CA264_13745 0.17 +0.8 3,211,455 - CA264_13745 0.17 +0.4 3,211,598 + CA264_13745 0.26 -0.3 3,211,680 - CA264_13745 0.31 -1.5
Or see this region's nucleotide sequence