Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13325 and CA264_13330 are separated by 71 nucleotides CA264_13330 and CA264_13335 are separated by 33 nucleotides CA264_13335 and CA264_13340 are separated by 154 nucleotides
CA264_13325: CA264_13325 - phosphoserine aminotransferase, at 3,110,011 to 3,111,099
_13325
CA264_13330: CA264_13330 - hypothetical protein, at 3,111,171 to 3,111,359
_13330
CA264_13335: CA264_13335 - hypothetical protein, at 3,111,393 to 3,111,926
_13335
CA264_13340: CA264_13340 - iron-sulfur cluster assembly accessory protein, at 3,112,081 to 3,112,428
_13340
Position (kb)
3111
3112 Strain fitness (log2 ratio)
-1
0
1
2 at 3110.191 kb on + strand, within CA264_13325 at 3110.192 kb on - strand, within CA264_13325 at 3110.684 kb on - strand, within CA264_13325 at 3110.759 kb on - strand, within CA264_13325 at 3110.847 kb on + strand, within CA264_13325 at 3110.851 kb on + strand, within CA264_13325 at 3110.852 kb on - strand, within CA264_13325 at 3110.852 kb on - strand, within CA264_13325 at 3110.921 kb on + strand, within CA264_13325 at 3110.951 kb on + strand, within CA264_13325 at 3110.952 kb on - strand, within CA264_13325 at 3111.004 kb on + strand at 3111.004 kb on + strand at 3111.005 kb on - strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.007 kb on - strand at 3111.007 kb on - strand at 3111.046 kb on - strand at 3111.063 kb on + strand at 3111.063 kb on + strand at 3111.063 kb on + strand at 3111.064 kb on - strand at 3111.144 kb on + strand at 3111.145 kb on - strand at 3111.148 kb on + strand at 3111.148 kb on + strand at 3111.148 kb on + strand at 3111.148 kb on + strand at 3111.148 kb on + strand at 3111.149 kb on - strand at 3111.149 kb on - strand at 3111.149 kb on - strand at 3111.149 kb on - strand at 3111.228 kb on - strand, within CA264_13330 at 3111.254 kb on + strand, within CA264_13330 at 3111.305 kb on + strand, within CA264_13330 at 3111.305 kb on + strand, within CA264_13330 at 3111.309 kb on + strand, within CA264_13330 at 3111.310 kb on - strand, within CA264_13330 at 3111.310 kb on - strand, within CA264_13330 at 3111.371 kb on - strand at 3111.380 kb on + strand at 3111.380 kb on + strand at 3111.394 kb on + strand at 3111.525 kb on - strand, within CA264_13335 at 3111.571 kb on - strand, within CA264_13335 at 3111.598 kb on + strand, within CA264_13335 at 3111.598 kb on + strand, within CA264_13335 at 3111.599 kb on - strand, within CA264_13335 at 3111.617 kb on + strand, within CA264_13335 at 3111.618 kb on - strand, within CA264_13335 at 3111.690 kb on + strand, within CA264_13335 at 3111.717 kb on - strand, within CA264_13335 at 3111.830 kb on - strand, within CA264_13335 at 3111.847 kb on + strand, within CA264_13335 at 3111.847 kb on + strand, within CA264_13335 at 3111.850 kb on + strand, within CA264_13335 at 3111.851 kb on - strand, within CA264_13335 at 3111.851 kb on - strand, within CA264_13335 at 3111.879 kb on + strand at 3111.935 kb on + strand at 3111.948 kb on - strand at 3112.011 kb on + strand at 3112.011 kb on + strand at 3112.012 kb on - strand at 3112.078 kb on - strand at 3112.110 kb on - strand at 3112.110 kb on - strand at 3112.110 kb on - strand at 3112.300 kb on - strand, within CA264_13340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 3,110,191 + CA264_13325 0.17 +0.1 3,110,192 - CA264_13325 0.17 +0.5 3,110,684 - CA264_13325 0.62 +0.1 3,110,759 - CA264_13325 0.69 -0.5 3,110,847 + CA264_13325 0.77 +0.2 3,110,851 + CA264_13325 0.77 -0.6 3,110,852 - CA264_13325 0.77 +0.1 3,110,852 - CA264_13325 0.77 -0.2 3,110,921 + CA264_13325 0.84 +1.2 3,110,951 + CA264_13325 0.86 +0.2 3,110,952 - CA264_13325 0.86 -0.4 3,111,004 + -0.3 3,111,004 + +0.7 3,111,005 - +0.6 3,111,006 + -0.4 3,111,006 + -0.0 3,111,007 - +1.1 3,111,007 - +1.1 3,111,046 - +0.1 3,111,063 + -0.2 3,111,063 + -0.1 3,111,063 + +0.0 3,111,064 - -0.0 3,111,144 + -0.3 3,111,145 - +0.1 3,111,148 + +0.2 3,111,148 + -0.5 3,111,148 + -0.6 3,111,148 + -0.5 3,111,148 + +0.4 3,111,149 - -0.5 3,111,149 - +0.0 3,111,149 - -0.2 3,111,149 - -0.2 3,111,228 - CA264_13330 0.30 -0.7 3,111,254 + CA264_13330 0.44 +1.0 3,111,305 + CA264_13330 0.71 -0.2 3,111,305 + CA264_13330 0.71 -0.6 3,111,309 + CA264_13330 0.73 -0.2 3,111,310 - CA264_13330 0.74 -0.7 3,111,310 - CA264_13330 0.74 -0.4 3,111,371 - -1.3 3,111,380 + -0.8 3,111,380 + -0.0 3,111,394 + -0.6 3,111,525 - CA264_13335 0.25 +0.8 3,111,571 - CA264_13335 0.33 -0.7 3,111,598 + CA264_13335 0.38 -0.3 3,111,598 + CA264_13335 0.38 +1.2 3,111,599 - CA264_13335 0.39 -0.3 3,111,617 + CA264_13335 0.42 +0.2 3,111,618 - CA264_13335 0.42 +0.5 3,111,690 + CA264_13335 0.56 -0.3 3,111,717 - CA264_13335 0.61 +0.8 3,111,830 - CA264_13335 0.82 -0.1 3,111,847 + CA264_13335 0.85 +2.3 3,111,847 + CA264_13335 0.85 -0.6 3,111,850 + CA264_13335 0.86 -0.0 3,111,851 - CA264_13335 0.86 -0.6 3,111,851 - CA264_13335 0.86 -1.4 3,111,879 + +0.5 3,111,935 + -0.9 3,111,948 - +0.8 3,112,011 + -0.3 3,112,011 + -0.0 3,112,012 - +0.2 3,112,078 - -0.8 3,112,110 - +0.8 3,112,110 - -0.5 3,112,110 - -0.2 3,112,300 - CA264_13340 0.63 -0.3
Or see this region's nucleotide sequence