Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10300 and CA264_10305 are separated by 76 nucleotides CA264_10305 and CA264_10310 are separated by 280 nucleotides CA264_10310 and CA264_10315 are separated by 532 nucleotides
CA264_10300: CA264_10300 - RagB/SusD family nutrient uptake outer membrane protein, at 2,394,899 to 2,396,257
_10300
CA264_10305: CA264_10305 - hypothetical protein, at 2,396,334 to 2,396,630
_10305
CA264_10310: CA264_10310 - hypothetical protein, at 2,396,911 to 2,397,492
_10310
CA264_10315: CA264_10315 - DNA-binding protein, at 2,398,025 to 2,398,633
_10315
Position (kb)
2396
2397
2398 Strain fitness (log2 ratio)
-1
0
1 at 2395.929 kb on - strand, within CA264_10300 at 2396.138 kb on - strand at 2396.169 kb on - strand at 2396.321 kb on + strand at 2396.497 kb on + strand, within CA264_10305 at 2396.498 kb on - strand, within CA264_10305 at 2396.613 kb on + strand at 2396.614 kb on - strand at 2396.686 kb on + strand at 2396.768 kb on - strand at 2396.820 kb on + strand at 2396.821 kb on - strand at 2396.852 kb on + strand at 2396.959 kb on + strand at 2396.959 kb on + strand at 2396.963 kb on + strand at 2397.112 kb on + strand, within CA264_10310 at 2397.151 kb on + strand, within CA264_10310 at 2397.151 kb on + strand, within CA264_10310 at 2397.151 kb on + strand, within CA264_10310 at 2397.152 kb on - strand, within CA264_10310 at 2397.152 kb on - strand, within CA264_10310 at 2397.173 kb on + strand, within CA264_10310 at 2397.174 kb on - strand, within CA264_10310 at 2397.203 kb on + strand, within CA264_10310 at 2397.203 kb on + strand, within CA264_10310 at 2397.422 kb on + strand, within CA264_10310 at 2397.423 kb on - strand, within CA264_10310 at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.453 kb on - strand at 2397.535 kb on + strand at 2397.651 kb on - strand at 2397.719 kb on - strand at 2397.719 kb on - strand at 2397.886 kb on + strand at 2397.890 kb on + strand at 2397.891 kb on - strand at 2397.895 kb on + strand at 2397.895 kb on + strand at 2397.895 kb on + strand at 2397.895 kb on + strand at 2397.896 kb on - strand at 2397.898 kb on + strand at 2397.908 kb on + strand at 2397.910 kb on + strand at 2397.910 kb on + strand at 2397.963 kb on - strand at 2398.004 kb on + strand at 2398.004 kb on + strand at 2398.004 kb on + strand at 2398.005 kb on - strand at 2398.203 kb on - strand, within CA264_10315 at 2398.268 kb on - strand, within CA264_10315 at 2398.384 kb on + strand, within CA264_10315 at 2398.385 kb on - strand, within CA264_10315 at 2398.416 kb on - strand, within CA264_10315 at 2398.416 kb on - strand, within CA264_10315
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,395,929 - CA264_10300 0.76 -0.5 2,396,138 - -0.3 2,396,169 - -0.5 2,396,321 + -0.7 2,396,497 + CA264_10305 0.55 -0.1 2,396,498 - CA264_10305 0.55 -0.1 2,396,613 + +0.6 2,396,614 - -0.0 2,396,686 + -0.3 2,396,768 - -0.0 2,396,820 + -0.7 2,396,821 - -0.2 2,396,852 + -0.0 2,396,959 + -0.2 2,396,959 + +0.3 2,396,963 + -0.3 2,397,112 + CA264_10310 0.35 -0.6 2,397,151 + CA264_10310 0.41 -0.3 2,397,151 + CA264_10310 0.41 -0.3 2,397,151 + CA264_10310 0.41 -0.2 2,397,152 - CA264_10310 0.41 -0.9 2,397,152 - CA264_10310 0.41 -0.5 2,397,173 + CA264_10310 0.45 -0.3 2,397,174 - CA264_10310 0.45 -0.2 2,397,203 + CA264_10310 0.50 -0.4 2,397,203 + CA264_10310 0.50 -0.7 2,397,422 + CA264_10310 0.88 -0.5 2,397,423 - CA264_10310 0.88 +0.3 2,397,452 + -0.6 2,397,452 + +0.3 2,397,452 + -0.0 2,397,452 + -0.1 2,397,452 + +1.1 2,397,453 - +0.6 2,397,535 + -0.1 2,397,651 - -0.6 2,397,719 - +0.7 2,397,719 - -1.3 2,397,886 + -0.0 2,397,890 + -0.4 2,397,891 - -0.8 2,397,895 + -0.0 2,397,895 + -0.9 2,397,895 + +0.9 2,397,895 + +0.6 2,397,896 - +0.6 2,397,898 + -0.0 2,397,908 + -0.3 2,397,910 + +0.2 2,397,910 + +0.2 2,397,963 - +0.5 2,398,004 + -0.5 2,398,004 + +0.6 2,398,004 + +1.6 2,398,005 - -0.1 2,398,203 - CA264_10315 0.29 +1.2 2,398,268 - CA264_10315 0.40 +0.3 2,398,384 + CA264_10315 0.59 -1.7 2,398,385 - CA264_10315 0.59 -0.7 2,398,416 - CA264_10315 0.64 +0.0 2,398,416 - CA264_10315 0.64 +0.0
Or see this region's nucleotide sequence