Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09080 and CA264_09085 are separated by 3 nucleotides CA264_09085 and CA264_09090 are separated by 265 nucleotides
CA264_09080: CA264_09080 - FUSC family protein, at 2,125,110 to 2,126,162
_09080
CA264_09085: CA264_09085 - sugar hydrolase, at 2,126,166 to 2,128,481
_09085
CA264_09090: CA264_09090 - NADPH dehydrogenase NamA, at 2,128,747 to 2,129,823
_09090
Position (kb)
2126
2127
2128
2129 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2125.230 kb on + strand, within CA264_09080 at 2125.501 kb on - strand, within CA264_09080 at 2125.604 kb on + strand, within CA264_09080 at 2125.605 kb on - strand, within CA264_09080 at 2125.607 kb on - strand, within CA264_09080 at 2125.734 kb on - strand, within CA264_09080 at 2125.847 kb on + strand, within CA264_09080 at 2125.887 kb on - strand, within CA264_09080 at 2125.966 kb on + strand, within CA264_09080 at 2125.967 kb on - strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.033 kb on - strand, within CA264_09080 at 2126.033 kb on - strand, within CA264_09080 at 2126.033 kb on - strand, within CA264_09080 at 2126.210 kb on - strand at 2126.210 kb on - strand at 2126.210 kb on - strand at 2126.299 kb on + strand at 2126.299 kb on + strand at 2126.309 kb on + strand at 2126.361 kb on + strand at 2126.361 kb on + strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.509 kb on + strand, within CA264_09085 at 2126.510 kb on - strand, within CA264_09085 at 2126.510 kb on - strand, within CA264_09085 at 2126.520 kb on + strand, within CA264_09085 at 2126.573 kb on - strand, within CA264_09085 at 2126.579 kb on - strand, within CA264_09085 at 2126.614 kb on + strand, within CA264_09085 at 2126.615 kb on - strand, within CA264_09085 at 2126.615 kb on - strand, within CA264_09085 at 2126.662 kb on + strand, within CA264_09085 at 2126.764 kb on + strand, within CA264_09085 at 2126.774 kb on - strand, within CA264_09085 at 2126.796 kb on - strand, within CA264_09085 at 2126.867 kb on + strand, within CA264_09085 at 2126.889 kb on + strand, within CA264_09085 at 2126.899 kb on + strand, within CA264_09085 at 2126.918 kb on + strand, within CA264_09085 at 2126.930 kb on - strand, within CA264_09085 at 2126.983 kb on + strand, within CA264_09085 at 2126.983 kb on + strand, within CA264_09085 at 2126.990 kb on - strand, within CA264_09085 at 2126.990 kb on - strand, within CA264_09085 at 2127.002 kb on + strand, within CA264_09085 at 2127.003 kb on - strand, within CA264_09085 at 2127.038 kb on - strand, within CA264_09085 at 2127.052 kb on + strand, within CA264_09085 at 2127.052 kb on + strand, within CA264_09085 at 2127.053 kb on - strand, within CA264_09085 at 2127.070 kb on + strand, within CA264_09085 at 2127.070 kb on + strand, within CA264_09085 at 2127.071 kb on - strand, within CA264_09085 at 2127.073 kb on + strand, within CA264_09085 at 2127.159 kb on - strand, within CA264_09085 at 2127.185 kb on + strand, within CA264_09085 at 2127.247 kb on + strand, within CA264_09085 at 2127.353 kb on - strand, within CA264_09085 at 2127.353 kb on - strand, within CA264_09085 at 2127.443 kb on + strand, within CA264_09085 at 2127.443 kb on + strand, within CA264_09085 at 2127.443 kb on + strand, within CA264_09085 at 2127.443 kb on + strand, within CA264_09085 at 2127.448 kb on + strand, within CA264_09085 at 2127.449 kb on - strand, within CA264_09085 at 2127.449 kb on - strand, within CA264_09085 at 2127.460 kb on + strand, within CA264_09085 at 2127.460 kb on + strand, within CA264_09085 at 2127.502 kb on - strand, within CA264_09085 at 2127.502 kb on - strand, within CA264_09085 at 2127.630 kb on + strand, within CA264_09085 at 2127.742 kb on + strand, within CA264_09085 at 2127.742 kb on + strand, within CA264_09085 at 2127.775 kb on + strand, within CA264_09085 at 2127.775 kb on + strand, within CA264_09085 at 2127.811 kb on + strand, within CA264_09085 at 2127.812 kb on - strand, within CA264_09085 at 2127.812 kb on - strand, within CA264_09085 at 2127.866 kb on + strand, within CA264_09085 at 2127.867 kb on - strand, within CA264_09085 at 2127.867 kb on - strand, within CA264_09085 at 2127.867 kb on - strand, within CA264_09085 at 2127.910 kb on + strand, within CA264_09085 at 2127.911 kb on - strand, within CA264_09085 at 2127.911 kb on - strand, within CA264_09085 at 2127.917 kb on - strand, within CA264_09085 at 2127.973 kb on + strand, within CA264_09085 at 2127.973 kb on + strand, within CA264_09085 at 2127.974 kb on - strand, within CA264_09085 at 2128.039 kb on - strand, within CA264_09085 at 2128.043 kb on + strand, within CA264_09085 at 2128.043 kb on + strand, within CA264_09085 at 2128.045 kb on + strand, within CA264_09085 at 2128.046 kb on - strand, within CA264_09085 at 2128.046 kb on - strand, within CA264_09085 at 2128.048 kb on + strand, within CA264_09085 at 2128.049 kb on - strand, within CA264_09085 at 2128.134 kb on + strand, within CA264_09085 at 2128.253 kb on - strand at 2128.256 kb on + strand at 2128.257 kb on - strand at 2128.257 kb on - strand at 2128.258 kb on + strand at 2128.259 kb on - strand at 2128.259 kb on - strand at 2128.271 kb on + strand at 2128.273 kb on + strand at 2128.273 kb on + strand at 2128.274 kb on - strand at 2128.292 kb on - strand at 2128.318 kb on - strand at 2128.358 kb on + strand at 2128.359 kb on - strand at 2128.396 kb on + strand at 2128.397 kb on - strand at 2128.494 kb on + strand at 2128.494 kb on + strand at 2128.494 kb on + strand at 2128.495 kb on - strand at 2128.597 kb on + strand at 2128.598 kb on - strand at 2128.605 kb on - strand at 2128.741 kb on - strand at 2128.746 kb on + strand at 2128.747 kb on - strand at 2128.747 kb on - strand at 2128.747 kb on - strand at 2128.826 kb on - strand at 2129.039 kb on + strand, within CA264_09090 at 2129.040 kb on - strand, within CA264_09090 at 2129.136 kb on - strand, within CA264_09090 at 2129.291 kb on - strand, within CA264_09090 at 2129.291 kb on - strand, within CA264_09090 at 2129.309 kb on - strand, within CA264_09090 at 2129.341 kb on + strand, within CA264_09090 at 2129.405 kb on + strand, within CA264_09090 at 2129.420 kb on + strand, within CA264_09090
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,125,230 + CA264_09080 0.11 +0.1 2,125,501 - CA264_09080 0.37 +1.3 2,125,604 + CA264_09080 0.47 -0.5 2,125,605 - CA264_09080 0.47 -0.6 2,125,607 - CA264_09080 0.47 +0.7 2,125,734 - CA264_09080 0.59 -0.2 2,125,847 + CA264_09080 0.70 +0.1 2,125,887 - CA264_09080 0.74 -0.4 2,125,966 + CA264_09080 0.81 +0.4 2,125,967 - CA264_09080 0.81 +0.2 2,126,032 + CA264_09080 0.88 +0.4 2,126,032 + CA264_09080 0.88 +1.0 2,126,032 + CA264_09080 0.88 -0.5 2,126,032 + CA264_09080 0.88 -0.6 2,126,032 + CA264_09080 0.88 +0.1 2,126,033 - CA264_09080 0.88 -1.8 2,126,033 - CA264_09080 0.88 -0.1 2,126,033 - CA264_09080 0.88 -0.2 2,126,210 - -0.1 2,126,210 - -0.2 2,126,210 - +0.3 2,126,299 + -0.2 2,126,299 + -1.3 2,126,309 + -0.2 2,126,361 + -0.2 2,126,361 + +0.2 2,126,362 - -1.0 2,126,362 - -0.1 2,126,362 - +0.4 2,126,362 - +0.0 2,126,362 - +0.5 2,126,362 - -0.3 2,126,362 - -0.2 2,126,509 + CA264_09085 0.15 -1.5 2,126,510 - CA264_09085 0.15 -0.7 2,126,510 - CA264_09085 0.15 -2.1 2,126,520 + CA264_09085 0.15 -1.0 2,126,573 - CA264_09085 0.18 -1.5 2,126,579 - CA264_09085 0.18 +0.5 2,126,614 + CA264_09085 0.19 -0.2 2,126,615 - CA264_09085 0.19 +1.0 2,126,615 - CA264_09085 0.19 -0.3 2,126,662 + CA264_09085 0.21 -0.7 2,126,764 + CA264_09085 0.26 +0.5 2,126,774 - CA264_09085 0.26 -0.7 2,126,796 - CA264_09085 0.27 +0.0 2,126,867 + CA264_09085 0.30 -0.1 2,126,889 + CA264_09085 0.31 -0.2 2,126,899 + CA264_09085 0.32 +0.6 2,126,918 + CA264_09085 0.32 -0.2 2,126,930 - CA264_09085 0.33 -1.8 2,126,983 + CA264_09085 0.35 -2.1 2,126,983 + CA264_09085 0.35 +0.0 2,126,990 - CA264_09085 0.36 -0.3 2,126,990 - CA264_09085 0.36 -0.8 2,127,002 + CA264_09085 0.36 +1.4 2,127,003 - CA264_09085 0.36 -0.3 2,127,038 - CA264_09085 0.38 -0.8 2,127,052 + CA264_09085 0.38 -0.2 2,127,052 + CA264_09085 0.38 -0.1 2,127,053 - CA264_09085 0.38 -0.0 2,127,070 + CA264_09085 0.39 -0.4 2,127,070 + CA264_09085 0.39 +1.9 2,127,071 - CA264_09085 0.39 -0.9 2,127,073 + CA264_09085 0.39 -0.0 2,127,159 - CA264_09085 0.43 -0.5 2,127,185 + CA264_09085 0.44 -0.0 2,127,247 + CA264_09085 0.47 +0.6 2,127,353 - CA264_09085 0.51 +0.1 2,127,353 - CA264_09085 0.51 -0.3 2,127,443 + CA264_09085 0.55 -2.5 2,127,443 + CA264_09085 0.55 -0.1 2,127,443 + CA264_09085 0.55 -0.1 2,127,443 + CA264_09085 0.55 +1.0 2,127,448 + CA264_09085 0.55 -1.7 2,127,449 - CA264_09085 0.55 -1.0 2,127,449 - CA264_09085 0.55 +0.1 2,127,460 + CA264_09085 0.56 -0.1 2,127,460 + CA264_09085 0.56 -0.6 2,127,502 - CA264_09085 0.58 -1.3 2,127,502 - CA264_09085 0.58 -0.6 2,127,630 + CA264_09085 0.63 +0.1 2,127,742 + CA264_09085 0.68 +1.1 2,127,742 + CA264_09085 0.68 -0.2 2,127,775 + CA264_09085 0.69 +0.4 2,127,775 + CA264_09085 0.69 -0.1 2,127,811 + CA264_09085 0.71 -1.9 2,127,812 - CA264_09085 0.71 -0.2 2,127,812 - CA264_09085 0.71 +0.2 2,127,866 + CA264_09085 0.73 -2.2 2,127,867 - CA264_09085 0.73 +0.2 2,127,867 - CA264_09085 0.73 -0.1 2,127,867 - CA264_09085 0.73 -0.7 2,127,910 + CA264_09085 0.75 -0.5 2,127,911 - CA264_09085 0.75 -0.7 2,127,911 - CA264_09085 0.75 -1.5 2,127,917 - CA264_09085 0.76 +1.6 2,127,973 + CA264_09085 0.78 +0.9 2,127,973 + CA264_09085 0.78 -0.2 2,127,974 - CA264_09085 0.78 +0.1 2,128,039 - CA264_09085 0.81 -0.3 2,128,043 + CA264_09085 0.81 -0.3 2,128,043 + CA264_09085 0.81 -0.5 2,128,045 + CA264_09085 0.81 -0.8 2,128,046 - CA264_09085 0.81 -0.0 2,128,046 - CA264_09085 0.81 -1.2 2,128,048 + CA264_09085 0.81 -0.1 2,128,049 - CA264_09085 0.81 -0.0 2,128,134 + CA264_09085 0.85 -0.0 2,128,253 - -0.5 2,128,256 + +0.4 2,128,257 - -0.3 2,128,257 - -0.1 2,128,258 + +0.6 2,128,259 - -0.4 2,128,259 - +0.8 2,128,271 + -0.3 2,128,273 + +0.7 2,128,273 + -0.5 2,128,274 - -0.1 2,128,292 - -1.1 2,128,318 - +0.1 2,128,358 + -1.1 2,128,359 - +0.6 2,128,396 + -0.3 2,128,397 - -0.7 2,128,494 + -0.3 2,128,494 + +0.5 2,128,494 + -0.0 2,128,495 - -0.6 2,128,597 + -0.2 2,128,598 - +0.2 2,128,605 - -0.2 2,128,741 - +1.9 2,128,746 + +0.6 2,128,747 - -0.5 2,128,747 - -0.4 2,128,747 - -0.2 2,128,826 - +0.0 2,129,039 + CA264_09090 0.27 +0.9 2,129,040 - CA264_09090 0.27 -0.9 2,129,136 - CA264_09090 0.36 -0.5 2,129,291 - CA264_09090 0.51 +2.0 2,129,291 - CA264_09090 0.51 +1.0 2,129,309 - CA264_09090 0.52 +0.1 2,129,341 + CA264_09090 0.55 -0.3 2,129,405 + CA264_09090 0.61 -1.3 2,129,420 + CA264_09090 0.62 -0.3
Or see this region's nucleotide sequence