Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09020 and CA264_09025 are separated by 95 nucleotides CA264_09025 and CA264_09030 are separated by 758 nucleotides
CA264_09020: CA264_09020 - alpha/beta hydrolase, at 2,106,322 to 2,107,107
_09020
CA264_09025: CA264_09025 - peptidase M28, at 2,107,203 to 2,108,855
_09025
CA264_09030: CA264_09030 - glycoside hydrolase family 31, at 2,109,614 to 2,112,085
_09030
Position (kb)
2107
2108
2109 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2106.275 kb on + strand at 2106.275 kb on + strand at 2106.299 kb on + strand at 2106.300 kb on - strand at 2106.355 kb on + strand at 2106.355 kb on + strand at 2106.355 kb on + strand at 2106.402 kb on + strand, within CA264_09020 at 2106.423 kb on - strand, within CA264_09020 at 2106.428 kb on + strand, within CA264_09020 at 2106.429 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.464 kb on + strand, within CA264_09020 at 2106.470 kb on - strand, within CA264_09020 at 2106.499 kb on - strand, within CA264_09020 at 2106.509 kb on - strand, within CA264_09020 at 2106.514 kb on - strand, within CA264_09020 at 2106.523 kb on - strand, within CA264_09020 at 2106.540 kb on - strand, within CA264_09020 at 2106.549 kb on - strand, within CA264_09020 at 2106.549 kb on - strand, within CA264_09020 at 2106.630 kb on - strand, within CA264_09020 at 2106.728 kb on - strand, within CA264_09020 at 2106.732 kb on + strand, within CA264_09020 at 2106.733 kb on - strand, within CA264_09020 at 2106.760 kb on - strand, within CA264_09020 at 2106.762 kb on - strand, within CA264_09020 at 2106.793 kb on + strand, within CA264_09020 at 2106.794 kb on - strand, within CA264_09020 at 2106.871 kb on + strand, within CA264_09020 at 2106.926 kb on + strand, within CA264_09020 at 2106.927 kb on - strand, within CA264_09020 at 2106.950 kb on + strand, within CA264_09020 at 2106.951 kb on - strand, within CA264_09020 at 2107.002 kb on + strand, within CA264_09020 at 2107.002 kb on + strand, within CA264_09020 at 2107.002 kb on + strand, within CA264_09020 at 2107.003 kb on - strand, within CA264_09020 at 2107.003 kb on - strand, within CA264_09020 at 2107.016 kb on + strand, within CA264_09020 at 2107.023 kb on - strand, within CA264_09020 at 2107.046 kb on + strand at 2107.046 kb on + strand at 2107.121 kb on - strand at 2107.122 kb on + strand at 2107.126 kb on + strand at 2107.126 kb on + strand at 2107.152 kb on - strand at 2107.163 kb on - strand at 2107.184 kb on + strand at 2107.216 kb on + strand at 2107.216 kb on + strand at 2107.229 kb on + strand at 2107.230 kb on - strand at 2107.230 kb on - strand at 2107.280 kb on - strand at 2107.328 kb on - strand at 2107.328 kb on - strand at 2107.344 kb on + strand at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.502 kb on + strand, within CA264_09025 at 2107.515 kb on - strand, within CA264_09025 at 2107.515 kb on - strand, within CA264_09025 at 2107.579 kb on + strand, within CA264_09025 at 2107.579 kb on + strand, within CA264_09025 at 2107.580 kb on - strand, within CA264_09025 at 2107.606 kb on + strand, within CA264_09025 at 2107.606 kb on + strand, within CA264_09025 at 2107.669 kb on - strand, within CA264_09025 at 2107.677 kb on + strand, within CA264_09025 at 2107.677 kb on + strand, within CA264_09025 at 2107.678 kb on - strand, within CA264_09025 at 2107.678 kb on - strand, within CA264_09025 at 2107.678 kb on - strand, within CA264_09025 at 2107.682 kb on + strand, within CA264_09025 at 2107.682 kb on + strand, within CA264_09025 at 2107.683 kb on - strand, within CA264_09025 at 2107.683 kb on - strand, within CA264_09025 at 2107.683 kb on - strand, within CA264_09025 at 2107.687 kb on + strand, within CA264_09025 at 2107.687 kb on + strand, within CA264_09025 at 2107.688 kb on - strand, within CA264_09025 at 2107.700 kb on + strand, within CA264_09025 at 2107.711 kb on + strand, within CA264_09025 at 2107.715 kb on + strand, within CA264_09025 at 2107.716 kb on - strand, within CA264_09025 at 2107.716 kb on - strand, within CA264_09025 at 2107.751 kb on - strand, within CA264_09025 at 2107.758 kb on + strand, within CA264_09025 at 2107.758 kb on + strand, within CA264_09025 at 2107.758 kb on + strand, within CA264_09025 at 2107.787 kb on + strand, within CA264_09025 at 2107.826 kb on + strand, within CA264_09025 at 2107.829 kb on + strand, within CA264_09025 at 2107.879 kb on + strand, within CA264_09025 at 2107.882 kb on + strand, within CA264_09025 at 2107.882 kb on + strand, within CA264_09025 at 2107.883 kb on - strand, within CA264_09025 at 2107.883 kb on - strand, within CA264_09025 at 2107.917 kb on + strand, within CA264_09025 at 2107.931 kb on + strand, within CA264_09025 at 2107.931 kb on + strand, within CA264_09025 at 2107.931 kb on + strand, within CA264_09025 at 2107.932 kb on - strand, within CA264_09025 at 2107.932 kb on - strand, within CA264_09025 at 2108.070 kb on + strand, within CA264_09025 at 2108.076 kb on - strand, within CA264_09025 at 2108.100 kb on + strand, within CA264_09025 at 2108.101 kb on - strand, within CA264_09025 at 2108.152 kb on - strand, within CA264_09025 at 2108.152 kb on - strand, within CA264_09025 at 2108.158 kb on + strand, within CA264_09025 at 2108.163 kb on - strand, within CA264_09025 at 2108.213 kb on + strand, within CA264_09025 at 2108.213 kb on + strand, within CA264_09025 at 2108.217 kb on + strand, within CA264_09025 at 2108.275 kb on + strand, within CA264_09025 at 2108.275 kb on + strand, within CA264_09025 at 2108.276 kb on - strand, within CA264_09025 at 2108.277 kb on + strand, within CA264_09025 at 2108.278 kb on - strand, within CA264_09025 at 2108.283 kb on - strand, within CA264_09025 at 2108.320 kb on + strand, within CA264_09025 at 2108.362 kb on - strand, within CA264_09025 at 2108.373 kb on + strand, within CA264_09025 at 2108.374 kb on - strand, within CA264_09025 at 2108.384 kb on - strand, within CA264_09025 at 2108.420 kb on + strand, within CA264_09025 at 2108.421 kb on - strand, within CA264_09025 at 2108.453 kb on - strand, within CA264_09025 at 2108.462 kb on - strand, within CA264_09025 at 2108.483 kb on - strand, within CA264_09025 at 2108.483 kb on - strand, within CA264_09025 at 2108.516 kb on - strand, within CA264_09025 at 2108.516 kb on - strand, within CA264_09025 at 2108.516 kb on - strand, within CA264_09025 at 2108.619 kb on + strand, within CA264_09025 at 2108.748 kb on + strand at 2108.779 kb on + strand at 2108.779 kb on + strand at 2108.779 kb on + strand at 2108.949 kb on + strand at 2108.953 kb on + strand at 2108.999 kb on + strand at 2109.000 kb on - strand at 2109.040 kb on - strand at 2109.040 kb on - strand at 2109.057 kb on + strand at 2109.057 kb on + strand at 2109.057 kb on + strand at 2109.058 kb on - strand at 2109.058 kb on - strand at 2109.058 kb on - strand at 2109.059 kb on + strand at 2109.059 kb on + strand at 2109.060 kb on - strand at 2109.060 kb on - strand at 2109.060 kb on - strand at 2109.060 kb on - strand at 2109.074 kb on + strand at 2109.074 kb on + strand at 2109.075 kb on - strand at 2109.132 kb on + strand at 2109.132 kb on + strand at 2109.133 kb on - strand at 2109.142 kb on + strand at 2109.143 kb on - strand at 2109.143 kb on - strand at 2109.174 kb on - strand at 2109.174 kb on - strand at 2109.175 kb on + strand at 2109.175 kb on + strand at 2109.176 kb on - strand at 2109.176 kb on - strand at 2109.183 kb on - strand at 2109.377 kb on - strand at 2109.380 kb on + strand at 2109.381 kb on - strand at 2109.396 kb on + strand at 2109.398 kb on + strand at 2109.412 kb on + strand at 2109.413 kb on - strand at 2109.419 kb on - strand at 2109.477 kb on + strand at 2109.480 kb on - strand at 2109.483 kb on + strand at 2109.483 kb on + strand at 2109.497 kb on + strand at 2109.497 kb on + strand at 2109.498 kb on - strand at 2109.518 kb on - strand at 2109.552 kb on - strand at 2109.552 kb on - strand at 2109.552 kb on - strand at 2109.553 kb on + strand at 2109.599 kb on - strand at 2109.622 kb on + strand at 2109.622 kb on + strand at 2109.622 kb on + strand at 2109.622 kb on + strand at 2109.622 kb on + strand at 2109.623 kb on - strand at 2109.623 kb on - strand at 2109.623 kb on - strand at 2109.673 kb on - strand at 2109.815 kb on + strand at 2109.816 kb on - strand at 2109.816 kb on - strand at 2109.823 kb on + strand at 2109.824 kb on - strand at 2109.837 kb on + strand at 2109.838 kb on - strand at 2109.838 kb on - strand at 2109.838 kb on - strand at 2109.842 kb on - strand at 2109.842 kb on - strand at 2109.848 kb on + strand at 2109.848 kb on + strand at 2109.849 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,106,275 + -0.2 2,106,275 + +0.3 2,106,299 + -0.4 2,106,300 - +1.7 2,106,355 + +1.7 2,106,355 + +0.2 2,106,355 + -0.4 2,106,402 + CA264_09020 0.10 +0.0 2,106,423 - CA264_09020 0.13 -0.1 2,106,428 + CA264_09020 0.13 -1.6 2,106,429 - CA264_09020 0.14 +0.8 2,106,432 - CA264_09020 0.14 -0.7 2,106,432 - CA264_09020 0.14 +0.4 2,106,432 - CA264_09020 0.14 -0.4 2,106,432 - CA264_09020 0.14 -0.0 2,106,464 + CA264_09020 0.18 +0.1 2,106,470 - CA264_09020 0.19 +0.1 2,106,499 - CA264_09020 0.23 -0.8 2,106,509 - CA264_09020 0.24 -1.6 2,106,514 - CA264_09020 0.24 -0.2 2,106,523 - CA264_09020 0.26 -1.2 2,106,540 - CA264_09020 0.28 +0.5 2,106,549 - CA264_09020 0.29 +1.1 2,106,549 - CA264_09020 0.29 -0.3 2,106,630 - CA264_09020 0.39 -1.0 2,106,728 - CA264_09020 0.52 +0.0 2,106,732 + CA264_09020 0.52 -0.3 2,106,733 - CA264_09020 0.52 -0.3 2,106,760 - CA264_09020 0.56 +0.9 2,106,762 - CA264_09020 0.56 +0.7 2,106,793 + CA264_09020 0.60 +0.3 2,106,794 - CA264_09020 0.60 -0.3 2,106,871 + CA264_09020 0.70 -0.2 2,106,926 + CA264_09020 0.77 -0.1 2,106,927 - CA264_09020 0.77 -0.1 2,106,950 + CA264_09020 0.80 -0.3 2,106,951 - CA264_09020 0.80 -0.4 2,107,002 + CA264_09020 0.87 -0.6 2,107,002 + CA264_09020 0.87 +0.2 2,107,002 + CA264_09020 0.87 -1.7 2,107,003 - CA264_09020 0.87 -0.2 2,107,003 - CA264_09020 0.87 -1.2 2,107,016 + CA264_09020 0.88 -1.0 2,107,023 - CA264_09020 0.89 -0.8 2,107,046 + -2.5 2,107,046 + -0.7 2,107,121 - -0.3 2,107,122 + -0.6 2,107,126 + -0.4 2,107,126 + -0.1 2,107,152 - -0.4 2,107,163 - -2.0 2,107,184 + +0.5 2,107,216 + -0.3 2,107,216 + -1.2 2,107,229 + -0.3 2,107,230 - +0.3 2,107,230 - -0.5 2,107,280 - +0.5 2,107,328 - -0.5 2,107,328 - -0.2 2,107,344 + -0.4 2,107,410 + CA264_09025 0.13 +0.2 2,107,410 + CA264_09025 0.13 -0.1 2,107,410 + CA264_09025 0.13 -0.3 2,107,410 + CA264_09025 0.13 +0.0 2,107,410 + CA264_09025 0.13 +0.5 2,107,502 + CA264_09025 0.18 -0.5 2,107,515 - CA264_09025 0.19 +0.6 2,107,515 - CA264_09025 0.19 +0.0 2,107,579 + CA264_09025 0.23 -1.6 2,107,579 + CA264_09025 0.23 -1.4 2,107,580 - CA264_09025 0.23 -0.1 2,107,606 + CA264_09025 0.24 -0.8 2,107,606 + CA264_09025 0.24 -0.1 2,107,669 - CA264_09025 0.28 +0.4 2,107,677 + CA264_09025 0.29 +1.3 2,107,677 + CA264_09025 0.29 -0.2 2,107,678 - CA264_09025 0.29 -0.2 2,107,678 - CA264_09025 0.29 +0.5 2,107,678 - CA264_09025 0.29 +1.1 2,107,682 + CA264_09025 0.29 +0.1 2,107,682 + CA264_09025 0.29 -0.4 2,107,683 - CA264_09025 0.29 -0.3 2,107,683 - CA264_09025 0.29 -0.5 2,107,683 - CA264_09025 0.29 -0.1 2,107,687 + CA264_09025 0.29 -0.6 2,107,687 + CA264_09025 0.29 +0.5 2,107,688 - CA264_09025 0.29 -0.4 2,107,700 + CA264_09025 0.30 -0.7 2,107,711 + CA264_09025 0.31 +0.2 2,107,715 + CA264_09025 0.31 +0.8 2,107,716 - CA264_09025 0.31 -0.4 2,107,716 - CA264_09025 0.31 +0.1 2,107,751 - CA264_09025 0.33 -0.3 2,107,758 + CA264_09025 0.34 -0.2 2,107,758 + CA264_09025 0.34 -0.1 2,107,758 + CA264_09025 0.34 +0.1 2,107,787 + CA264_09025 0.35 -0.9 2,107,826 + CA264_09025 0.38 +0.7 2,107,829 + CA264_09025 0.38 +1.0 2,107,879 + CA264_09025 0.41 +0.3 2,107,882 + CA264_09025 0.41 -0.3 2,107,882 + CA264_09025 0.41 -0.3 2,107,883 - CA264_09025 0.41 -0.0 2,107,883 - CA264_09025 0.41 +1.7 2,107,917 + CA264_09025 0.43 -0.1 2,107,931 + CA264_09025 0.44 -0.2 2,107,931 + CA264_09025 0.44 -0.1 2,107,931 + CA264_09025 0.44 -0.1 2,107,932 - CA264_09025 0.44 -0.1 2,107,932 - CA264_09025 0.44 -0.5 2,108,070 + CA264_09025 0.52 +0.7 2,108,076 - CA264_09025 0.53 -1.0 2,108,100 + CA264_09025 0.54 +0.0 2,108,101 - CA264_09025 0.54 +0.0 2,108,152 - CA264_09025 0.57 +0.5 2,108,152 - CA264_09025 0.57 -0.5 2,108,158 + CA264_09025 0.58 -0.2 2,108,163 - CA264_09025 0.58 -3.1 2,108,213 + CA264_09025 0.61 +0.4 2,108,213 + CA264_09025 0.61 -1.3 2,108,217 + CA264_09025 0.61 -0.6 2,108,275 + CA264_09025 0.65 -0.4 2,108,275 + CA264_09025 0.65 -0.4 2,108,276 - CA264_09025 0.65 +0.4 2,108,277 + CA264_09025 0.65 +0.5 2,108,278 - CA264_09025 0.65 +0.5 2,108,283 - CA264_09025 0.65 +0.1 2,108,320 + CA264_09025 0.68 -0.9 2,108,362 - CA264_09025 0.70 -0.1 2,108,373 + CA264_09025 0.71 -0.1 2,108,374 - CA264_09025 0.71 -0.2 2,108,384 - CA264_09025 0.71 -0.4 2,108,420 + CA264_09025 0.74 +0.2 2,108,421 - CA264_09025 0.74 -2.6 2,108,453 - CA264_09025 0.76 -0.0 2,108,462 - CA264_09025 0.76 +0.0 2,108,483 - CA264_09025 0.77 +0.6 2,108,483 - CA264_09025 0.77 -0.4 2,108,516 - CA264_09025 0.79 -0.2 2,108,516 - CA264_09025 0.79 -0.2 2,108,516 - CA264_09025 0.79 +0.1 2,108,619 + CA264_09025 0.86 +2.3 2,108,748 + +1.5 2,108,779 + -0.2 2,108,779 + -1.3 2,108,779 + -1.4 2,108,949 + -0.5 2,108,953 + +0.4 2,108,999 + -0.1 2,109,000 - -0.1 2,109,040 - +0.3 2,109,040 - -0.8 2,109,057 + -0.4 2,109,057 + -0.7 2,109,057 + +0.7 2,109,058 - -0.9 2,109,058 - +1.3 2,109,058 - +0.6 2,109,059 + +0.5 2,109,059 + -0.6 2,109,060 - -0.0 2,109,060 - -0.6 2,109,060 - +0.5 2,109,060 - -0.8 2,109,074 + -0.1 2,109,074 + -0.3 2,109,075 - -0.7 2,109,132 + -1.2 2,109,132 + -0.0 2,109,133 - +0.0 2,109,142 + +0.0 2,109,143 - -0.4 2,109,143 - +0.5 2,109,174 - -0.2 2,109,174 - -1.1 2,109,175 + +0.2 2,109,175 + +0.1 2,109,176 - -0.9 2,109,176 - -0.0 2,109,183 - -1.6 2,109,377 - -0.3 2,109,380 + -0.1 2,109,381 - -0.8 2,109,396 + +1.8 2,109,398 + -0.0 2,109,412 + +0.2 2,109,413 - +0.0 2,109,419 - -0.0 2,109,477 + +1.7 2,109,480 - +0.2 2,109,483 + +0.6 2,109,483 + +0.7 2,109,497 + -0.3 2,109,497 + +0.2 2,109,498 - -0.3 2,109,518 - -1.1 2,109,552 - -0.5 2,109,552 - -0.4 2,109,552 - +0.5 2,109,553 + +0.7 2,109,599 - -0.2 2,109,622 + -0.4 2,109,622 + +0.5 2,109,622 + -0.3 2,109,622 + -0.0 2,109,622 + +0.0 2,109,623 - +0.3 2,109,623 - -0.4 2,109,623 - -0.5 2,109,673 - -0.6 2,109,815 + -0.4 2,109,816 - +0.3 2,109,816 - +1.8 2,109,823 + -0.0 2,109,824 - -1.3 2,109,837 + -1.7 2,109,838 - +0.2 2,109,838 - +1.0 2,109,838 - -0.4 2,109,842 - +0.6 2,109,842 - +0.5 2,109,848 + -0.4 2,109,848 + -0.8 2,109,849 - -0.2
Or see this region's nucleotide sequence