Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09010 and CA264_09015 are separated by 5 nucleotides CA264_09015 and CA264_09020 are separated by 355 nucleotides
CA264_09010: CA264_09010 - PAS domain-containing sensor histidine kinase, at 2,103,280 to 2,104,806
_09010
CA264_09015: CA264_09015 - acyl-CoA dehydrogenase, at 2,104,812 to 2,105,966
_09015
CA264_09020: CA264_09020 - alpha/beta hydrolase, at 2,106,322 to 2,107,107
_09020
Position (kb)
2104
2105
2106 Strain fitness (log2 ratio)
-1
0
1 at 2103.855 kb on + strand, within CA264_09010 at 2103.924 kb on - strand, within CA264_09010 at 2103.924 kb on - strand, within CA264_09010 at 2103.934 kb on - strand, within CA264_09010 at 2103.949 kb on + strand, within CA264_09010 at 2103.958 kb on + strand, within CA264_09010 at 2103.958 kb on + strand, within CA264_09010 at 2103.959 kb on - strand, within CA264_09010 at 2104.024 kb on - strand, within CA264_09010 at 2104.032 kb on + strand, within CA264_09010 at 2104.033 kb on - strand, within CA264_09010 at 2104.033 kb on - strand, within CA264_09010 at 2104.044 kb on + strand, within CA264_09010 at 2104.281 kb on + strand, within CA264_09010 at 2104.281 kb on + strand, within CA264_09010 at 2104.282 kb on - strand, within CA264_09010 at 2104.282 kb on - strand, within CA264_09010 at 2104.282 kb on - strand, within CA264_09010 at 2104.348 kb on - strand, within CA264_09010 at 2104.348 kb on - strand, within CA264_09010 at 2104.348 kb on - strand, within CA264_09010 at 2104.350 kb on - strand, within CA264_09010 at 2104.417 kb on - strand, within CA264_09010 at 2104.431 kb on + strand, within CA264_09010 at 2104.431 kb on + strand, within CA264_09010 at 2104.471 kb on + strand, within CA264_09010 at 2104.642 kb on + strand, within CA264_09010 at 2104.643 kb on - strand, within CA264_09010 at 2104.670 kb on + strand at 2104.790 kb on + strand at 2104.795 kb on + strand at 2104.797 kb on - strand at 2104.798 kb on - strand at 2104.813 kb on + strand at 2104.814 kb on - strand at 2104.814 kb on - strand at 2104.814 kb on - strand at 2104.826 kb on + strand at 2104.860 kb on - strand at 2104.862 kb on - strand at 2104.862 kb on - strand at 2104.862 kb on - strand at 2104.923 kb on + strand at 2104.997 kb on + strand, within CA264_09015 at 2104.998 kb on - strand, within CA264_09015 at 2105.056 kb on + strand, within CA264_09015 at 2105.170 kb on + strand, within CA264_09015 at 2105.170 kb on + strand, within CA264_09015 at 2105.257 kb on + strand, within CA264_09015 at 2105.258 kb on - strand, within CA264_09015 at 2105.281 kb on + strand, within CA264_09015 at 2105.281 kb on + strand, within CA264_09015 at 2105.282 kb on - strand, within CA264_09015 at 2105.282 kb on - strand, within CA264_09015 at 2105.478 kb on - strand, within CA264_09015 at 2105.488 kb on + strand, within CA264_09015 at 2105.488 kb on + strand, within CA264_09015 at 2105.584 kb on + strand, within CA264_09015 at 2105.648 kb on + strand, within CA264_09015 at 2105.648 kb on + strand, within CA264_09015 at 2105.649 kb on - strand, within CA264_09015 at 2105.930 kb on + strand at 2105.949 kb on + strand at 2105.988 kb on + strand at 2105.988 kb on + strand at 2105.989 kb on - strand at 2105.990 kb on + strand at 2105.990 kb on + strand at 2105.991 kb on - strand at 2105.992 kb on + strand at 2105.992 kb on + strand at 2105.992 kb on + strand at 2105.992 kb on + strand at 2105.993 kb on - strand at 2105.993 kb on - strand at 2105.993 kb on - strand at 2105.999 kb on + strand at 2106.038 kb on - strand at 2106.058 kb on + strand at 2106.058 kb on + strand at 2106.059 kb on - strand at 2106.059 kb on - strand at 2106.060 kb on + strand at 2106.060 kb on + strand at 2106.060 kb on + strand at 2106.061 kb on - strand at 2106.080 kb on + strand at 2106.106 kb on - strand at 2106.118 kb on - strand at 2106.128 kb on + strand at 2106.129 kb on - strand at 2106.163 kb on - strand at 2106.164 kb on + strand at 2106.165 kb on - strand at 2106.275 kb on + strand at 2106.275 kb on + strand at 2106.299 kb on + strand at 2106.300 kb on - strand at 2106.355 kb on + strand at 2106.355 kb on + strand at 2106.355 kb on + strand at 2106.402 kb on + strand, within CA264_09020 at 2106.423 kb on - strand, within CA264_09020 at 2106.428 kb on + strand, within CA264_09020 at 2106.429 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.464 kb on + strand, within CA264_09020 at 2106.470 kb on - strand, within CA264_09020 at 2106.499 kb on - strand, within CA264_09020 at 2106.509 kb on - strand, within CA264_09020 at 2106.514 kb on - strand, within CA264_09020 at 2106.523 kb on - strand, within CA264_09020 at 2106.540 kb on - strand, within CA264_09020 at 2106.549 kb on - strand, within CA264_09020 at 2106.549 kb on - strand, within CA264_09020 at 2106.630 kb on - strand, within CA264_09020 at 2106.728 kb on - strand, within CA264_09020 at 2106.732 kb on + strand, within CA264_09020 at 2106.733 kb on - strand, within CA264_09020 at 2106.760 kb on - strand, within CA264_09020 at 2106.762 kb on - strand, within CA264_09020 at 2106.793 kb on + strand, within CA264_09020 at 2106.794 kb on - strand, within CA264_09020 at 2106.871 kb on + strand, within CA264_09020 at 2106.926 kb on + strand, within CA264_09020 at 2106.927 kb on - strand, within CA264_09020 at 2106.950 kb on + strand, within CA264_09020 at 2106.951 kb on - strand, within CA264_09020
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 2,103,855 + CA264_09010 0.38 +0.9 2,103,924 - CA264_09010 0.42 +1.5 2,103,924 - CA264_09010 0.42 +0.2 2,103,934 - CA264_09010 0.43 +0.7 2,103,949 + CA264_09010 0.44 +0.3 2,103,958 + CA264_09010 0.44 +0.3 2,103,958 + CA264_09010 0.44 +0.0 2,103,959 - CA264_09010 0.44 -0.2 2,104,024 - CA264_09010 0.49 -0.3 2,104,032 + CA264_09010 0.49 -0.9 2,104,033 - CA264_09010 0.49 -0.1 2,104,033 - CA264_09010 0.49 +0.6 2,104,044 + CA264_09010 0.50 -0.0 2,104,281 + CA264_09010 0.66 +0.0 2,104,281 + CA264_09010 0.66 +0.2 2,104,282 - CA264_09010 0.66 +0.9 2,104,282 - CA264_09010 0.66 -0.0 2,104,282 - CA264_09010 0.66 -0.7 2,104,348 - CA264_09010 0.70 +0.0 2,104,348 - CA264_09010 0.70 +0.1 2,104,348 - CA264_09010 0.70 +0.4 2,104,350 - CA264_09010 0.70 -0.0 2,104,417 - CA264_09010 0.74 +0.5 2,104,431 + CA264_09010 0.75 +0.4 2,104,431 + CA264_09010 0.75 +1.0 2,104,471 + CA264_09010 0.78 -0.1 2,104,642 + CA264_09010 0.89 +0.0 2,104,643 - CA264_09010 0.89 +0.3 2,104,670 + -0.2 2,104,790 + -0.3 2,104,795 + +0.0 2,104,797 - -0.6 2,104,798 - -0.9 2,104,813 + +0.3 2,104,814 - -0.0 2,104,814 - -0.1 2,104,814 - +0.2 2,104,826 + -0.1 2,104,860 - -0.2 2,104,862 - -1.7 2,104,862 - -0.3 2,104,862 - -0.7 2,104,923 + -0.8 2,104,997 + CA264_09015 0.16 -0.2 2,104,998 - CA264_09015 0.16 -0.4 2,105,056 + CA264_09015 0.21 -0.1 2,105,170 + CA264_09015 0.31 -0.1 2,105,170 + CA264_09015 0.31 +0.1 2,105,257 + CA264_09015 0.39 -0.8 2,105,258 - CA264_09015 0.39 -0.2 2,105,281 + CA264_09015 0.41 +0.7 2,105,281 + CA264_09015 0.41 -0.3 2,105,282 - CA264_09015 0.41 +1.7 2,105,282 - CA264_09015 0.41 +0.1 2,105,478 - CA264_09015 0.58 -0.6 2,105,488 + CA264_09015 0.59 +0.3 2,105,488 + CA264_09015 0.59 +0.1 2,105,584 + CA264_09015 0.67 -0.9 2,105,648 + CA264_09015 0.72 +0.2 2,105,648 + CA264_09015 0.72 -0.4 2,105,649 - CA264_09015 0.72 -0.1 2,105,930 + -0.2 2,105,949 + -0.4 2,105,988 + -0.9 2,105,988 + -0.1 2,105,989 - -0.8 2,105,990 + -0.4 2,105,990 + +0.0 2,105,991 - -0.1 2,105,992 + -0.5 2,105,992 + -0.2 2,105,992 + -0.6 2,105,992 + -0.6 2,105,993 - +0.6 2,105,993 - -0.1 2,105,993 - +0.3 2,105,999 + +0.7 2,106,038 - -0.4 2,106,058 + +0.1 2,106,058 + -0.1 2,106,059 - -0.3 2,106,059 - +0.0 2,106,060 + +0.3 2,106,060 + -0.5 2,106,060 + -0.4 2,106,061 - -1.6 2,106,080 + -0.7 2,106,106 - -0.6 2,106,118 - +0.3 2,106,128 + +0.0 2,106,129 - +0.4 2,106,163 - -0.8 2,106,164 + -0.5 2,106,165 - -0.7 2,106,275 + -0.2 2,106,275 + +0.3 2,106,299 + -0.4 2,106,300 - +1.7 2,106,355 + +1.7 2,106,355 + +0.2 2,106,355 + -0.4 2,106,402 + CA264_09020 0.10 +0.0 2,106,423 - CA264_09020 0.13 -0.1 2,106,428 + CA264_09020 0.13 -1.6 2,106,429 - CA264_09020 0.14 +0.8 2,106,432 - CA264_09020 0.14 -0.7 2,106,432 - CA264_09020 0.14 +0.4 2,106,432 - CA264_09020 0.14 -0.4 2,106,432 - CA264_09020 0.14 -0.0 2,106,464 + CA264_09020 0.18 +0.1 2,106,470 - CA264_09020 0.19 +0.1 2,106,499 - CA264_09020 0.23 -0.8 2,106,509 - CA264_09020 0.24 -1.6 2,106,514 - CA264_09020 0.24 -0.2 2,106,523 - CA264_09020 0.26 -1.2 2,106,540 - CA264_09020 0.28 +0.5 2,106,549 - CA264_09020 0.29 +1.1 2,106,549 - CA264_09020 0.29 -0.3 2,106,630 - CA264_09020 0.39 -1.0 2,106,728 - CA264_09020 0.52 +0.0 2,106,732 + CA264_09020 0.52 -0.3 2,106,733 - CA264_09020 0.52 -0.3 2,106,760 - CA264_09020 0.56 +0.9 2,106,762 - CA264_09020 0.56 +0.7 2,106,793 + CA264_09020 0.60 +0.3 2,106,794 - CA264_09020 0.60 -0.3 2,106,871 + CA264_09020 0.70 -0.2 2,106,926 + CA264_09020 0.77 -0.1 2,106,927 - CA264_09020 0.77 -0.1 2,106,950 + CA264_09020 0.80 -0.3 2,106,951 - CA264_09020 0.80 -0.4
Or see this region's nucleotide sequence