Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07620 and CA264_07625 are separated by 101 nucleotides CA264_07625 and CA264_07630 are separated by 165 nucleotides
CA264_07620: CA264_07620 - hypothetical protein, at 1,768,638 to 1,769,384
_07620
CA264_07625: CA264_07625 - phosphohistidine phosphatase, at 1,769,486 to 1,769,983
_07625
CA264_07630: CA264_07630 - DNA topoisomerase I, at 1,770,149 to 1,772,596
_07630
Position (kb)
1769
1770 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1768.560 kb on - strand at 1768.560 kb on - strand at 1768.595 kb on - strand at 1768.603 kb on - strand at 1768.625 kb on + strand at 1768.626 kb on - strand at 1768.702 kb on + strand at 1768.703 kb on - strand at 1768.746 kb on + strand, within CA264_07620 at 1768.747 kb on - strand, within CA264_07620 at 1768.747 kb on - strand, within CA264_07620 at 1768.821 kb on + strand, within CA264_07620 at 1768.851 kb on + strand, within CA264_07620 at 1769.026 kb on - strand, within CA264_07620 at 1769.063 kb on + strand, within CA264_07620 at 1769.225 kb on + strand, within CA264_07620 at 1769.319 kb on + strand at 1769.328 kb on - strand at 1769.371 kb on - strand at 1769.371 kb on - strand at 1769.385 kb on - strand at 1769.385 kb on - strand at 1769.419 kb on + strand at 1769.447 kb on + strand at 1769.453 kb on - strand at 1769.468 kb on + strand at 1769.514 kb on - strand at 1769.618 kb on + strand, within CA264_07625 at 1769.619 kb on - strand, within CA264_07625 at 1769.752 kb on + strand, within CA264_07625 at 1769.769 kb on + strand, within CA264_07625 at 1769.927 kb on + strand, within CA264_07625 at 1769.969 kb on + strand at 1769.984 kb on - strand at 1770.005 kb on - strand at 1770.012 kb on - strand at 1770.012 kb on - strand at 1770.015 kb on - strand at 1770.028 kb on - strand at 1770.061 kb on + strand at 1770.062 kb on - strand at 1770.067 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 1,768,560 - -0.2 1,768,560 - +0.6 1,768,595 - +0.1 1,768,603 - +0.0 1,768,625 + -1.2 1,768,626 - +0.4 1,768,702 + -2.3 1,768,703 - +0.2 1,768,746 + CA264_07620 0.14 -0.8 1,768,747 - CA264_07620 0.15 +0.2 1,768,747 - CA264_07620 0.15 +0.6 1,768,821 + CA264_07620 0.24 -1.0 1,768,851 + CA264_07620 0.29 -1.2 1,769,026 - CA264_07620 0.52 -0.8 1,769,063 + CA264_07620 0.57 -0.8 1,769,225 + CA264_07620 0.79 -0.1 1,769,319 + -0.8 1,769,328 - -0.4 1,769,371 - +1.3 1,769,371 - -0.7 1,769,385 - -1.6 1,769,385 - -0.2 1,769,419 + +0.2 1,769,447 + -1.0 1,769,453 - -0.0 1,769,468 + -1.4 1,769,514 - +1.7 1,769,618 + CA264_07625 0.27 -1.3 1,769,619 - CA264_07625 0.27 -0.5 1,769,752 + CA264_07625 0.53 -1.1 1,769,769 + CA264_07625 0.57 -1.8 1,769,927 + CA264_07625 0.89 -3.3 1,769,969 + -2.2 1,769,984 - +0.0 1,770,005 - -0.8 1,770,012 - -1.2 1,770,012 - -0.1 1,770,015 - -0.5 1,770,028 - -1.0 1,770,061 + -1.4 1,770,062 - -0.6 1,770,067 - -0.8
Or see this region's nucleotide sequence