Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07525 and CA264_07530 are separated by 394 nucleotides CA264_07530 and CA264_07535 overlap by 11 nucleotides
CA264_07525: CA264_07525 - hypothetical protein, at 1,742,184 to 1,743,212
_07525
CA264_07530: CA264_07530 - ATP-binding protein, at 1,743,607 to 1,744,962
_07530
CA264_07535: CA264_07535 - sigma-54-dependent Fis family transcriptional regulator, at 1,744,952 to 1,746,337
_07535
Position (kb)
1743
1744
1745 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1742.615 kb on - strand, within CA264_07525 at 1742.652 kb on + strand, within CA264_07525 at 1742.653 kb on - strand, within CA264_07525 at 1742.653 kb on - strand, within CA264_07525 at 1742.678 kb on + strand, within CA264_07525 at 1742.690 kb on - strand, within CA264_07525 at 1742.692 kb on + strand, within CA264_07525 at 1742.693 kb on - strand, within CA264_07525 at 1742.711 kb on + strand, within CA264_07525 at 1742.711 kb on + strand, within CA264_07525 at 1742.899 kb on + strand, within CA264_07525 at 1742.926 kb on + strand, within CA264_07525 at 1742.927 kb on - strand, within CA264_07525 at 1742.927 kb on - strand, within CA264_07525 at 1742.927 kb on - strand, within CA264_07525 at 1742.996 kb on - strand, within CA264_07525 at 1743.049 kb on + strand, within CA264_07525 at 1743.050 kb on - strand, within CA264_07525 at 1743.091 kb on + strand, within CA264_07525 at 1743.092 kb on - strand, within CA264_07525 at 1743.118 kb on + strand at 1743.119 kb on - strand at 1743.152 kb on - strand at 1743.233 kb on - strand at 1743.233 kb on - strand at 1743.320 kb on + strand at 1743.320 kb on + strand at 1743.346 kb on + strand at 1743.413 kb on - strand at 1743.414 kb on + strand at 1743.414 kb on + strand at 1743.415 kb on - strand at 1743.454 kb on + strand at 1743.495 kb on + strand at 1743.496 kb on - strand at 1743.511 kb on + strand at 1743.511 kb on + strand at 1743.511 kb on + strand at 1743.512 kb on - strand at 1743.549 kb on + strand at 1743.550 kb on - strand at 1743.598 kb on - strand at 1743.726 kb on + strand at 1743.726 kb on + strand at 1743.748 kb on + strand, within CA264_07530 at 1743.749 kb on - strand, within CA264_07530 at 1743.749 kb on - strand, within CA264_07530 at 1743.886 kb on + strand, within CA264_07530 at 1743.894 kb on + strand, within CA264_07530 at 1743.895 kb on - strand, within CA264_07530 at 1743.895 kb on - strand, within CA264_07530 at 1744.018 kb on + strand, within CA264_07530 at 1744.060 kb on + strand, within CA264_07530 at 1744.061 kb on - strand, within CA264_07530 at 1744.061 kb on - strand, within CA264_07530 at 1744.194 kb on + strand, within CA264_07530 at 1744.195 kb on - strand, within CA264_07530 at 1744.197 kb on - strand, within CA264_07530 at 1744.257 kb on + strand, within CA264_07530 at 1744.328 kb on - strand, within CA264_07530 at 1744.328 kb on - strand, within CA264_07530 at 1744.328 kb on - strand, within CA264_07530 at 1744.328 kb on - strand, within CA264_07530 at 1744.549 kb on - strand, within CA264_07530 at 1744.623 kb on - strand, within CA264_07530 at 1744.751 kb on + strand, within CA264_07530 at 1744.751 kb on + strand, within CA264_07530 at 1744.752 kb on - strand, within CA264_07530 at 1744.752 kb on - strand, within CA264_07530 at 1744.755 kb on + strand, within CA264_07530 at 1744.755 kb on + strand, within CA264_07530 at 1744.755 kb on + strand, within CA264_07530 at 1744.756 kb on - strand, within CA264_07530 at 1744.756 kb on - strand, within CA264_07530 at 1744.778 kb on + strand, within CA264_07530 at 1744.779 kb on - strand, within CA264_07530 at 1744.779 kb on - strand, within CA264_07530 at 1744.844 kb on - strand at 1744.963 kb on - strand at 1745.025 kb on - strand at 1745.235 kb on + strand, within CA264_07535 at 1745.236 kb on - strand, within CA264_07535 at 1745.236 kb on - strand, within CA264_07535 at 1745.295 kb on - strand, within CA264_07535 at 1745.303 kb on + strand, within CA264_07535 at 1745.304 kb on - strand, within CA264_07535 at 1745.304 kb on - strand, within CA264_07535 at 1745.304 kb on - strand, within CA264_07535 at 1745.504 kb on + strand, within CA264_07535 at 1745.504 kb on + strand, within CA264_07535 at 1745.505 kb on - strand, within CA264_07535 at 1745.703 kb on - strand, within CA264_07535 at 1745.822 kb on - strand, within CA264_07535 at 1745.822 kb on - strand, within CA264_07535 at 1745.825 kb on + strand, within CA264_07535 at 1745.825 kb on + strand, within CA264_07535 at 1745.825 kb on + strand, within CA264_07535 at 1745.826 kb on - strand, within CA264_07535 at 1745.830 kb on + strand, within CA264_07535 at 1745.848 kb on + strand, within CA264_07535 at 1745.849 kb on - strand, within CA264_07535 at 1745.940 kb on + strand, within CA264_07535 at 1745.941 kb on - strand, within CA264_07535
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 1,742,615 - CA264_07525 0.42 -0.4 1,742,652 + CA264_07525 0.45 -0.7 1,742,653 - CA264_07525 0.46 +0.9 1,742,653 - CA264_07525 0.46 -0.3 1,742,678 + CA264_07525 0.48 -0.3 1,742,690 - CA264_07525 0.49 -0.6 1,742,692 + CA264_07525 0.49 +0.2 1,742,693 - CA264_07525 0.49 +0.4 1,742,711 + CA264_07525 0.51 -0.4 1,742,711 + CA264_07525 0.51 -0.2 1,742,899 + CA264_07525 0.69 -0.2 1,742,926 + CA264_07525 0.72 -1.5 1,742,927 - CA264_07525 0.72 +1.0 1,742,927 - CA264_07525 0.72 +0.9 1,742,927 - CA264_07525 0.72 -0.7 1,742,996 - CA264_07525 0.79 +0.2 1,743,049 + CA264_07525 0.84 -0.1 1,743,050 - CA264_07525 0.84 +0.1 1,743,091 + CA264_07525 0.88 +0.5 1,743,092 - CA264_07525 0.88 +0.8 1,743,118 + -1.3 1,743,119 - -0.5 1,743,152 - -0.6 1,743,233 - +0.2 1,743,233 - +0.8 1,743,320 + -0.0 1,743,320 + -1.3 1,743,346 + +0.1 1,743,413 - +0.7 1,743,414 + +0.6 1,743,414 + -0.2 1,743,415 - -0.1 1,743,454 + +0.1 1,743,495 + +0.2 1,743,496 - +1.0 1,743,511 + -1.0 1,743,511 + -0.1 1,743,511 + +0.3 1,743,512 - +0.2 1,743,549 + +0.3 1,743,550 - +0.6 1,743,598 - +0.2 1,743,726 + +2.0 1,743,726 + -0.8 1,743,748 + CA264_07530 0.10 +1.2 1,743,749 - CA264_07530 0.10 +0.5 1,743,749 - CA264_07530 0.10 -0.5 1,743,886 + CA264_07530 0.21 -0.2 1,743,894 + CA264_07530 0.21 -0.3 1,743,895 - CA264_07530 0.21 -0.4 1,743,895 - CA264_07530 0.21 -1.4 1,744,018 + CA264_07530 0.30 +0.0 1,744,060 + CA264_07530 0.33 -0.1 1,744,061 - CA264_07530 0.33 -0.9 1,744,061 - CA264_07530 0.33 -0.6 1,744,194 + CA264_07530 0.43 -0.6 1,744,195 - CA264_07530 0.43 -1.2 1,744,197 - CA264_07530 0.44 -0.7 1,744,257 + CA264_07530 0.48 -1.5 1,744,328 - CA264_07530 0.53 -1.0 1,744,328 - CA264_07530 0.53 -0.4 1,744,328 - CA264_07530 0.53 -0.1 1,744,328 - CA264_07530 0.53 -0.2 1,744,549 - CA264_07530 0.69 +2.2 1,744,623 - CA264_07530 0.75 +0.0 1,744,751 + CA264_07530 0.84 -1.9 1,744,751 + CA264_07530 0.84 +0.4 1,744,752 - CA264_07530 0.84 +1.9 1,744,752 - CA264_07530 0.84 -0.5 1,744,755 + CA264_07530 0.85 +0.6 1,744,755 + CA264_07530 0.85 -0.6 1,744,755 + CA264_07530 0.85 +0.0 1,744,756 - CA264_07530 0.85 -0.6 1,744,756 - CA264_07530 0.85 -2.0 1,744,778 + CA264_07530 0.86 -0.9 1,744,779 - CA264_07530 0.86 -0.2 1,744,779 - CA264_07530 0.86 +0.5 1,744,844 - -0.2 1,744,963 - -1.6 1,745,025 - -1.0 1,745,235 + CA264_07535 0.20 +0.2 1,745,236 - CA264_07535 0.20 -0.2 1,745,236 - CA264_07535 0.20 -0.3 1,745,295 - CA264_07535 0.25 -1.4 1,745,303 + CA264_07535 0.25 +1.3 1,745,304 - CA264_07535 0.25 +0.1 1,745,304 - CA264_07535 0.25 +0.3 1,745,304 - CA264_07535 0.25 +1.0 1,745,504 + CA264_07535 0.40 +0.3 1,745,504 + CA264_07535 0.40 +1.0 1,745,505 - CA264_07535 0.40 -0.0 1,745,703 - CA264_07535 0.54 -0.3 1,745,822 - CA264_07535 0.63 -0.7 1,745,822 - CA264_07535 0.63 +0.8 1,745,825 + CA264_07535 0.63 +1.0 1,745,825 + CA264_07535 0.63 -0.0 1,745,825 + CA264_07535 0.63 -1.8 1,745,826 - CA264_07535 0.63 -0.3 1,745,830 + CA264_07535 0.63 -0.2 1,745,848 + CA264_07535 0.65 -0.3 1,745,849 - CA264_07535 0.65 +0.6 1,745,940 + CA264_07535 0.71 -0.0 1,745,941 - CA264_07535 0.71 -0.3
Or see this region's nucleotide sequence