Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07400 and CA264_07405 are separated by 6 nucleotides CA264_07405 and CA264_07410 are separated by 171 nucleotides
CA264_07400: CA264_07400 - threonine--tRNA ligase, at 1,703,862 to 1,705,799
_07400
CA264_07405: CA264_07405 - hypothetical protein, at 1,705,806 to 1,706,885
_07405
CA264_07410: CA264_07410 - hypothetical protein, at 1,707,057 to 1,707,845
_07410
Position (kb)
1705
1706
1707 Strain fitness (log2 ratio)
-1
0
1
2 at 1705.799 kb on + strand at 1705.799 kb on + strand at 1705.834 kb on - strand at 1705.870 kb on + strand at 1705.871 kb on - strand at 1705.900 kb on + strand at 1705.900 kb on + strand at 1705.900 kb on + strand at 1705.900 kb on + strand at 1705.901 kb on - strand at 1705.901 kb on - strand at 1705.901 kb on - strand at 1705.917 kb on + strand, within CA264_07405 at 1705.918 kb on - strand, within CA264_07405 at 1705.936 kb on + strand, within CA264_07405 at 1705.957 kb on + strand, within CA264_07405 at 1705.975 kb on + strand, within CA264_07405 at 1705.975 kb on + strand, within CA264_07405 at 1706.026 kb on + strand, within CA264_07405 at 1706.083 kb on - strand, within CA264_07405 at 1706.083 kb on - strand, within CA264_07405 at 1706.094 kb on - strand, within CA264_07405 at 1706.095 kb on + strand, within CA264_07405 at 1706.122 kb on - strand, within CA264_07405 at 1706.123 kb on + strand, within CA264_07405 at 1706.124 kb on - strand, within CA264_07405 at 1706.127 kb on + strand, within CA264_07405 at 1706.127 kb on + strand, within CA264_07405 at 1706.128 kb on - strand, within CA264_07405 at 1706.195 kb on + strand, within CA264_07405 at 1706.197 kb on + strand, within CA264_07405 at 1706.197 kb on + strand, within CA264_07405 at 1706.281 kb on - strand, within CA264_07405 at 1706.344 kb on + strand, within CA264_07405 at 1706.344 kb on + strand, within CA264_07405 at 1706.344 kb on + strand, within CA264_07405 at 1706.398 kb on + strand, within CA264_07405 at 1706.399 kb on - strand, within CA264_07405 at 1706.401 kb on + strand, within CA264_07405 at 1706.401 kb on + strand, within CA264_07405 at 1706.401 kb on + strand, within CA264_07405 at 1706.402 kb on - strand, within CA264_07405 at 1706.402 kb on - strand, within CA264_07405 at 1706.486 kb on - strand, within CA264_07405 at 1706.486 kb on - strand, within CA264_07405 at 1706.487 kb on + strand, within CA264_07405 at 1706.524 kb on + strand, within CA264_07405 at 1706.525 kb on - strand, within CA264_07405 at 1706.601 kb on + strand, within CA264_07405 at 1706.710 kb on + strand, within CA264_07405 at 1706.711 kb on - strand, within CA264_07405 at 1706.711 kb on - strand, within CA264_07405 at 1706.869 kb on - strand at 1706.899 kb on + strand at 1706.902 kb on + strand at 1706.902 kb on + strand at 1706.976 kb on + strand at 1706.976 kb on + strand at 1707.047 kb on + strand at 1707.059 kb on - strand at 1707.059 kb on - strand at 1707.078 kb on + strand at 1707.079 kb on - strand at 1707.083 kb on + strand at 1707.190 kb on + strand, within CA264_07410 at 1707.190 kb on + strand, within CA264_07410 at 1707.191 kb on - strand, within CA264_07410 at 1707.212 kb on - strand, within CA264_07410 at 1707.214 kb on + strand, within CA264_07410 at 1707.224 kb on + strand, within CA264_07410 at 1707.355 kb on + strand, within CA264_07410 at 1707.355 kb on + strand, within CA264_07410 at 1707.371 kb on + strand, within CA264_07410 at 1707.539 kb on - strand, within CA264_07410 at 1707.584 kb on + strand, within CA264_07410 at 1707.628 kb on + strand, within CA264_07410 at 1707.629 kb on - strand, within CA264_07410 at 1707.652 kb on + strand, within CA264_07410 at 1707.653 kb on - strand, within CA264_07410 at 1707.653 kb on - strand, within CA264_07410 at 1707.653 kb on - strand, within CA264_07410 at 1707.675 kb on + strand, within CA264_07410 at 1707.710 kb on + strand, within CA264_07410 at 1707.710 kb on + strand, within CA264_07410 at 1707.712 kb on + strand, within CA264_07410 at 1707.712 kb on + strand, within CA264_07410 at 1707.824 kb on + strand at 1707.845 kb on + strand at 1707.849 kb on + strand at 1707.849 kb on + strand at 1707.849 kb on + strand at 1707.849 kb on + strand at 1707.850 kb on - strand at 1707.850 kb on - strand at 1707.862 kb on + strand at 1707.862 kb on + strand at 1707.862 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 1,705,799 + -0.6 1,705,799 + -1.3 1,705,834 - +0.5 1,705,870 + -0.1 1,705,871 - +0.1 1,705,900 + -0.4 1,705,900 + -0.2 1,705,900 + -0.5 1,705,900 + +0.5 1,705,901 - -0.9 1,705,901 - -0.2 1,705,901 - -1.6 1,705,917 + CA264_07405 0.10 -0.1 1,705,918 - CA264_07405 0.10 -0.1 1,705,936 + CA264_07405 0.12 -0.5 1,705,957 + CA264_07405 0.14 +0.1 1,705,975 + CA264_07405 0.16 +0.3 1,705,975 + CA264_07405 0.16 -1.0 1,706,026 + CA264_07405 0.20 +0.1 1,706,083 - CA264_07405 0.26 -1.3 1,706,083 - CA264_07405 0.26 -0.5 1,706,094 - CA264_07405 0.27 +0.2 1,706,095 + CA264_07405 0.27 -0.7 1,706,122 - CA264_07405 0.29 -0.8 1,706,123 + CA264_07405 0.29 +0.9 1,706,124 - CA264_07405 0.29 -1.6 1,706,127 + CA264_07405 0.30 -0.7 1,706,127 + CA264_07405 0.30 -0.5 1,706,128 - CA264_07405 0.30 -1.1 1,706,195 + CA264_07405 0.36 +0.9 1,706,197 + CA264_07405 0.36 +0.4 1,706,197 + CA264_07405 0.36 -0.8 1,706,281 - CA264_07405 0.44 +0.5 1,706,344 + CA264_07405 0.50 -0.5 1,706,344 + CA264_07405 0.50 +0.1 1,706,344 + CA264_07405 0.50 +0.2 1,706,398 + CA264_07405 0.55 -0.3 1,706,399 - CA264_07405 0.55 -1.1 1,706,401 + CA264_07405 0.55 -0.4 1,706,401 + CA264_07405 0.55 +1.2 1,706,401 + CA264_07405 0.55 +0.9 1,706,402 - CA264_07405 0.55 +0.1 1,706,402 - CA264_07405 0.55 -0.2 1,706,486 - CA264_07405 0.63 -0.1 1,706,486 - CA264_07405 0.63 -0.8 1,706,487 + CA264_07405 0.63 +0.4 1,706,524 + CA264_07405 0.66 +0.4 1,706,525 - CA264_07405 0.67 -0.1 1,706,601 + CA264_07405 0.74 -0.6 1,706,710 + CA264_07405 0.84 +0.1 1,706,711 - CA264_07405 0.84 -0.6 1,706,711 - CA264_07405 0.84 -0.5 1,706,869 - -0.7 1,706,899 + -0.6 1,706,902 + -0.5 1,706,902 + -0.3 1,706,976 + -0.5 1,706,976 + -0.4 1,707,047 + +0.6 1,707,059 - +0.2 1,707,059 - +1.6 1,707,078 + +0.1 1,707,079 - +2.2 1,707,083 + +0.3 1,707,190 + CA264_07410 0.17 -0.5 1,707,190 + CA264_07410 0.17 +0.4 1,707,191 - CA264_07410 0.17 -0.6 1,707,212 - CA264_07410 0.20 +0.3 1,707,214 + CA264_07410 0.20 -0.0 1,707,224 + CA264_07410 0.21 +0.3 1,707,355 + CA264_07410 0.38 -0.7 1,707,355 + CA264_07410 0.38 -0.0 1,707,371 + CA264_07410 0.40 +0.9 1,707,539 - CA264_07410 0.61 -0.2 1,707,584 + CA264_07410 0.67 +0.8 1,707,628 + CA264_07410 0.72 +1.8 1,707,629 - CA264_07410 0.72 -0.6 1,707,652 + CA264_07410 0.75 -0.4 1,707,653 - CA264_07410 0.76 -0.6 1,707,653 - CA264_07410 0.76 -0.5 1,707,653 - CA264_07410 0.76 +0.2 1,707,675 + CA264_07410 0.78 +0.1 1,707,710 + CA264_07410 0.83 +0.5 1,707,710 + CA264_07410 0.83 +0.3 1,707,712 + CA264_07410 0.83 +0.5 1,707,712 + CA264_07410 0.83 -0.6 1,707,824 + +0.2 1,707,845 + +0.4 1,707,849 + +0.1 1,707,849 + +0.8 1,707,849 + +0.5 1,707,849 + +0.1 1,707,850 - -0.2 1,707,850 - -0.3 1,707,862 + +1.0 1,707,862 + -0.5 1,707,862 + +0.6
Or see this region's nucleotide sequence