Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02090 and CA264_02095 are separated by 100 nucleotides CA264_02095 and CA264_02100 are separated by 120 nucleotides
CA264_02090: CA264_02090 - peptidase M28, at 481,849 to 483,147
_02090
CA264_02095: CA264_02095 - AI-2E family transporter, at 483,248 to 484,306
_02095
CA264_02100: CA264_02100 - Clp protease ClpC, at 484,427 to 487,024
_02100
Position (kb) 483
484
485 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 482.257 kb on + strand, within CA264_02090 at 482.258 kb on - strand, within CA264_02090 at 482.273 kb on + strand, within CA264_02090 at 482.273 kb on + strand, within CA264_02090 at 482.274 kb on - strand, within CA264_02090 at 482.355 kb on - strand, within CA264_02090 at 482.355 kb on - strand, within CA264_02090 at 482.375 kb on - strand, within CA264_02090 at 482.375 kb on - strand, within CA264_02090 at 482.459 kb on + strand, within CA264_02090 at 482.524 kb on + strand, within CA264_02090 at 482.539 kb on + strand, within CA264_02090 at 482.540 kb on - strand, within CA264_02090 at 482.540 kb on - strand, within CA264_02090 at 482.540 kb on - strand, within CA264_02090 at 482.562 kb on + strand, within CA264_02090 at 482.563 kb on - strand, within CA264_02090 at 482.564 kb on + strand, within CA264_02090 at 482.565 kb on - strand, within CA264_02090 at 482.565 kb on - strand, within CA264_02090 at 482.565 kb on - strand, within CA264_02090 at 482.595 kb on + strand, within CA264_02090 at 482.600 kb on - strand, within CA264_02090 at 482.600 kb on - strand, within CA264_02090 at 482.655 kb on - strand, within CA264_02090 at 482.707 kb on + strand, within CA264_02090 at 482.707 kb on + strand, within CA264_02090 at 482.708 kb on - strand, within CA264_02090 at 482.708 kb on - strand, within CA264_02090 at 482.708 kb on - strand, within CA264_02090 at 482.830 kb on + strand, within CA264_02090 at 482.830 kb on + strand, within CA264_02090 at 482.831 kb on - strand, within CA264_02090 at 482.867 kb on - strand, within CA264_02090 at 483.198 kb on - strand at 483.236 kb on + strand at 483.236 kb on + strand at 483.256 kb on + strand at 483.257 kb on - strand at 483.267 kb on + strand at 483.290 kb on + strand at 483.567 kb on - strand, within CA264_02095 at 483.607 kb on - strand, within CA264_02095 at 483.675 kb on - strand, within CA264_02095 at 483.676 kb on + strand, within CA264_02095 at 483.677 kb on - strand, within CA264_02095 at 483.755 kb on - strand, within CA264_02095 at 483.755 kb on - strand, within CA264_02095 at 483.767 kb on + strand, within CA264_02095 at 483.768 kb on - strand, within CA264_02095 at 483.768 kb on - strand, within CA264_02095 at 483.811 kb on - strand, within CA264_02095 at 483.833 kb on + strand, within CA264_02095 at 483.834 kb on - strand, within CA264_02095 at 483.837 kb on - strand, within CA264_02095 at 483.844 kb on + strand, within CA264_02095 at 483.845 kb on - strand, within CA264_02095 at 483.846 kb on + strand, within CA264_02095 at 483.950 kb on - strand, within CA264_02095 at 483.951 kb on + strand, within CA264_02095 at 483.952 kb on - strand, within CA264_02095 at 483.952 kb on - strand, within CA264_02095 at 484.022 kb on + strand, within CA264_02095 at 484.023 kb on - strand, within CA264_02095 at 484.054 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.305 kb on - strand at 484.319 kb on - strand at 484.414 kb on + strand at 484.415 kb on - strand at 484.421 kb on + strand at 484.422 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 482,257 + CA264_02090 0.31 -0.8 482,258 - CA264_02090 0.31 +0.1 482,273 + CA264_02090 0.33 -0.3 482,273 + CA264_02090 0.33 -0.0 482,274 - CA264_02090 0.33 +0.8 482,355 - CA264_02090 0.39 -0.4 482,355 - CA264_02090 0.39 -0.2 482,375 - CA264_02090 0.40 -0.5 482,375 - CA264_02090 0.40 +0.8 482,459 + CA264_02090 0.47 -0.7 482,524 + CA264_02090 0.52 -2.9 482,539 + CA264_02090 0.53 -0.4 482,540 - CA264_02090 0.53 -0.5 482,540 - CA264_02090 0.53 +0.7 482,540 - CA264_02090 0.53 -0.2 482,562 + CA264_02090 0.55 +0.3 482,563 - CA264_02090 0.55 -0.5 482,564 + CA264_02090 0.55 +0.8 482,565 - CA264_02090 0.55 -0.1 482,565 - CA264_02090 0.55 -0.7 482,565 - CA264_02090 0.55 +0.4 482,595 + CA264_02090 0.57 +1.0 482,600 - CA264_02090 0.58 -0.6 482,600 - CA264_02090 0.58 +0.6 482,655 - CA264_02090 0.62 +0.4 482,707 + CA264_02090 0.66 +0.6 482,707 + CA264_02090 0.66 -0.5 482,708 - CA264_02090 0.66 +0.2 482,708 - CA264_02090 0.66 -1.5 482,708 - CA264_02090 0.66 -0.7 482,830 + CA264_02090 0.76 +0.4 482,830 + CA264_02090 0.76 -0.2 482,831 - CA264_02090 0.76 +0.6 482,867 - CA264_02090 0.78 +0.5 483,198 - +0.4 483,236 + +1.1 483,236 + +0.1 483,256 + -0.1 483,257 - -0.6 483,267 + +0.3 483,290 + -0.4 483,567 - CA264_02095 0.30 -1.5 483,607 - CA264_02095 0.34 -0.6 483,675 - CA264_02095 0.40 +0.4 483,676 + CA264_02095 0.40 -1.0 483,677 - CA264_02095 0.41 -0.6 483,755 - CA264_02095 0.48 -0.7 483,755 - CA264_02095 0.48 +0.2 483,767 + CA264_02095 0.49 -0.1 483,768 - CA264_02095 0.49 -0.2 483,768 - CA264_02095 0.49 -0.9 483,811 - CA264_02095 0.53 -0.1 483,833 + CA264_02095 0.55 -0.7 483,834 - CA264_02095 0.55 +2.4 483,837 - CA264_02095 0.56 +0.1 483,844 + CA264_02095 0.56 +1.0 483,845 - CA264_02095 0.56 +0.5 483,846 + CA264_02095 0.56 -0.6 483,950 - CA264_02095 0.66 +0.0 483,951 + CA264_02095 0.66 -0.3 483,952 - CA264_02095 0.66 -0.4 483,952 - CA264_02095 0.66 -0.0 484,022 + CA264_02095 0.73 +1.1 484,023 - CA264_02095 0.73 -1.8 484,054 + CA264_02095 0.76 +0.3 484,132 + CA264_02095 0.83 -0.2 484,132 + CA264_02095 0.83 -0.8 484,132 + CA264_02095 0.83 -0.4 484,132 + CA264_02095 0.83 -0.9 484,132 + CA264_02095 0.83 +0.2 484,305 - +0.0 484,319 - +0.5 484,414 + -1.2 484,415 - +0.2 484,421 + -1.5 484,422 - -0.4
Or see this region's nucleotide sequence