Experiment: m.b. Lomefloxacin 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00930 and CA264_00935 are separated by 103 nucleotides CA264_00935 and CA264_00940 are separated by 127 nucleotides CA264_00940 and CA264_00945 are separated by 89 nucleotides CA264_00945 and CA264_00950 are separated by 115 nucleotides CA264_00950 and CA264_00955 are separated by 256 nucleotides
CA264_00930: CA264_00930 - phosphorylase, at 199,188 to 200,045
_00930
CA264_00935: CA264_00935 - hypothetical protein, at 200,149 to 200,448
_00935
CA264_00940: CA264_00940 - hypothetical protein, at 200,576 to 200,875
_00940
CA264_00945: CA264_00945 - acyl-CoA reductase, at 200,965 to 201,975
_00945
CA264_00950: CA264_00950 - ferredoxin, at 202,091 to 202,441
_00950
CA264_00955: CA264_00955 - valine--tRNA ligase, at 202,698 to 205,331
_00955
Position (kb)
200
201
202 Strain fitness (log2 ratio)
-2
-1
0
1 at 200.086 kb on + strand at 200.087 kb on - strand at 200.135 kb on + strand at 200.157 kb on - strand at 200.157 kb on - strand at 200.157 kb on - strand at 200.253 kb on + strand, within CA264_00935 at 200.336 kb on + strand, within CA264_00935 at 200.336 kb on + strand, within CA264_00935 at 200.472 kb on + strand at 200.474 kb on + strand at 200.475 kb on - strand at 200.475 kb on - strand at 200.476 kb on + strand at 200.578 kb on - strand at 200.600 kb on - strand at 200.767 kb on + strand, within CA264_00940 at 200.767 kb on + strand, within CA264_00940 at 200.887 kb on + strand at 200.915 kb on + strand at 200.959 kb on - strand at 201.261 kb on - strand, within CA264_00945 at 201.498 kb on - strand, within CA264_00945 at 201.498 kb on - strand, within CA264_00945 at 201.602 kb on - strand, within CA264_00945 at 201.602 kb on - strand, within CA264_00945 at 201.671 kb on + strand, within CA264_00945 at 201.760 kb on - strand, within CA264_00945 at 201.858 kb on + strand, within CA264_00945 at 201.915 kb on + strand at 201.982 kb on - strand at 202.003 kb on - strand at 202.440 kb on - strand at 202.551 kb on - strand at 202.559 kb on + strand at 202.560 kb on - strand at 202.598 kb on + strand at 202.636 kb on + strand at 202.637 kb on - strand at 202.640 kb on - strand at 202.733 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.002 mM remove 200,086 + -0.3 200,087 - -1.0 200,135 + -2.5 200,157 - +1.1 200,157 - -1.9 200,157 - -1.3 200,253 + CA264_00935 0.35 +0.1 200,336 + CA264_00935 0.62 +1.7 200,336 + CA264_00935 0.62 -0.5 200,472 + +0.7 200,474 + +0.1 200,475 - +0.1 200,475 - -0.2 200,476 + -0.1 200,578 - -0.8 200,600 - +0.2 200,767 + CA264_00940 0.64 -0.6 200,767 + CA264_00940 0.64 +0.1 200,887 + -0.1 200,915 + +1.3 200,959 - +0.6 201,261 - CA264_00945 0.29 +0.0 201,498 - CA264_00945 0.53 -1.0 201,498 - CA264_00945 0.53 -0.0 201,602 - CA264_00945 0.63 +0.6 201,602 - CA264_00945 0.63 -0.2 201,671 + CA264_00945 0.70 -1.5 201,760 - CA264_00945 0.79 -0.4 201,858 + CA264_00945 0.88 -0.0 201,915 + -1.3 201,982 - -0.4 202,003 - -0.5 202,440 - -1.3 202,551 - -0.5 202,559 + -0.8 202,560 - -0.2 202,598 + +1.3 202,636 + -1.8 202,637 - +1.2 202,640 - +0.6 202,733 - -0.5
Or see this region's nucleotide sequence