Experiment: L-Valine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03345 and PS417_03350 are separated by 18 nucleotides PS417_03350 and PS417_03355 are separated by 18 nucleotides
PS417_03345: PS417_03345 - type I secretion protein TolC, at 767,314 to 768,534
_03345
PS417_03350: PS417_03350 - cytochrome C peroxidase, at 768,553 to 769,659
_03350
PS417_03355: PS417_03355 - cation transporter, at 769,678 to 772,815
_03355
Position (kb) 768
769
770 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 767.695 kb on + strand, within PS417_03345 at 767.695 kb on + strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 768.088 kb on - strand, within PS417_03345 at 768.122 kb on - strand, within PS417_03345 at 768.326 kb on + strand, within PS417_03345 at 768.458 kb on - strand at 768.512 kb on - strand at 768.552 kb on + strand at 768.757 kb on - strand, within PS417_03350 at 768.979 kb on + strand, within PS417_03350 at 768.980 kb on - strand, within PS417_03350 at 769.493 kb on + strand, within PS417_03350 at 769.493 kb on + strand, within PS417_03350 at 769.494 kb on - strand, within PS417_03350 at 769.552 kb on + strand at 770.100 kb on - strand, within PS417_03355 at 770.150 kb on - strand, within PS417_03355 at 770.150 kb on - strand, within PS417_03355 at 770.293 kb on + strand, within PS417_03355
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (C) remove 767,695 + PS417_03345 0.31 -0.5 767,695 + PS417_03345 0.31 +0.5 767,696 - PS417_03345 0.31 +0.5 767,696 - PS417_03345 0.31 -1.6 767,696 - PS417_03345 0.31 -1.2 767,696 - PS417_03345 0.31 -1.8 767,696 - PS417_03345 0.31 -1.8 768,088 - PS417_03345 0.63 -1.3 768,122 - PS417_03345 0.66 -1.2 768,326 + PS417_03345 0.83 -2.6 768,458 - -0.4 768,512 - -0.2 768,552 + -3.3 768,757 - PS417_03350 0.18 -2.5 768,979 + PS417_03350 0.38 -1.4 768,980 - PS417_03350 0.39 +0.1 769,493 + PS417_03350 0.85 -2.1 769,493 + PS417_03350 0.85 -1.6 769,494 - PS417_03350 0.85 -0.9 769,552 + -1.7 770,100 - PS417_03355 0.13 +0.4 770,150 - PS417_03355 0.15 +1.6 770,150 - PS417_03355 0.15 -1.2 770,293 + PS417_03355 0.20 +0.5
Or see this region's nucleotide sequence